RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 NISCHQ9Y2I1 1504 aa17.23■□□□□ 0.35
CBX5-204ENST00000550411 CHIC1Q5VXU3 224 aa16.47■□□□□ 0.23
CBX5-204ENST00000550411 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
CBX5-204ENST00000550411 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
CBX5-204ENST00000550411 ABCC9O60706 1549 aa15.57■□□□□ 0.08
CBX5-204ENST00000550411 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
CBX5-204ENST00000550411 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
CBX5-204ENST00000550411 NACADO15069 1562 aa14.72□□□□□ -0.05
CBX5-204ENST00000550411 PHF23Q9BUL5 403 aaPredicted RBP14.6□□□□□ -0.07
CBX5-204ENST00000550411 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
CBX5-204ENST00000550411 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
CBX5-204ENST00000550411 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
CBX5-204ENST00000550411 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
CBX5-204ENST00000550411 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
CBX5-204ENST00000550411 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.12
CBX5-204ENST00000550411 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
CBX5-204ENST00000550411 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
CBX5-204ENST00000550411 SHROOM4Q9ULL8 1493 aa14.18□□□□□ -0.14
CBX5-204ENST00000550411 CC2D2AQ9P2K1 1620 aa14.16□□□□□ -0.14
CBX5-204ENST00000550411 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
CBX5-204ENST00000550411 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
CBX5-204ENST00000550411 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
CBX5-204ENST00000550411 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
CBX5-204ENST00000550411 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
CBX5-204ENST00000550411 NCAPD3P42695 1498 aa13.5□□□□□ -0.25
CBX5-204ENST00000550411 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CBX5-204ENST00000550411 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
CBX5-204ENST00000550411 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
CBX5-204ENST00000550411 CUX2O14529 1486 aa13.48□□□□□ -0.25
CBX5-204ENST00000550411 ATAD2BQ9ULI0 1458 aa13.46□□□□□ -0.25
CBX5-204ENST00000550411 ERCC6Q03468 1493 aa13.44□□□□□ -0.26
CBX5-204ENST00000550411 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
CBX5-204ENST00000550411 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
CBX5-204ENST00000550411 PEG3Q9GZU2 1588 aa13.38□□□□□ -0.27
CBX5-204ENST00000550411 NESP48681 1621 aa13.36□□□□□ -0.27
CBX5-204ENST00000550411 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
CBX5-204ENST00000550411 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
CBX5-204ENST00000550411 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
CBX5-204ENST00000550411 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
CBX5-204ENST00000550411 WIZO95785 1651 aa13.23□□□□□ -0.29
CBX5-204ENST00000550411 PRDM2Q13029 1718 aa13.18□□□□□ -0.3
CBX5-204ENST00000550411 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
CBX5-204ENST00000550411 WDR62O43379 1518 aa13.08□□□□□ -0.32
CBX5-204ENST00000550411 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
CBX5-204ENST00000550411 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
CBX5-204ENST00000550411 CEP164Q9UPV0 1460 aa13.01□□□□□ -0.33
CBX5-204ENST00000550411 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
CBX5-204ENST00000550411 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
CBX5-204ENST00000550411 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
CBX5-204ENST00000550411 CFTRP13569 1480 aa12.92□□□□□ -0.34
CBX5-204ENST00000550411 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
CBX5-204ENST00000550411 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
CBX5-204ENST00000550411 CHD1O14646 1710 aa12.82□□□□□ -0.36
CBX5-204ENST00000550411 ADRA2BP18089 450 aa12.8□□□□□ -0.36
CBX5-204ENST00000550411 RIMBP3CA6NJZ7 1639 aa12.79□□□□□ -0.36
CBX5-204ENST00000550411 RIMBP3BA6NNM3 1639 aa12.79□□□□□ -0.36
CBX5-204ENST00000550411 RIMBP3Q9UFD9 1639 aa12.79□□□□□ -0.36
CBX5-204ENST00000550411 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
CBX5-204ENST00000550411 FOXD1Q16676 465 aa12.76□□□□□ -0.37
CBX5-204ENST00000550411 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
CBX5-204ENST00000550411 EIF4G3O43432 1585 aaKnown RBP12.76□□□□□ -0.37
CBX5-204ENST00000550411 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
CBX5-204ENST00000550411 DNMBPQ6XZF7 1577 aa12.73□□□□□ -0.37
CBX5-204ENST00000550411 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
CBX5-204ENST00000550411 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
CBX5-204ENST00000550411 ZNF608Q9ULD9 1512 aaPredicted RBP12.71□□□□□ -0.38
CBX5-204ENST00000550411 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
CBX5-204ENST00000550411 PPP6R1Q9UPN7 881 aa12.65□□□□□ -0.38
CBX5-204ENST00000550411 ARHGEF11O15085 1522 aa12.64□□□□□ -0.39
CBX5-204ENST00000550411 KCNA4P22459 653 aa12.63□□□□□ -0.39
CBX5-204ENST00000550411 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
CBX5-204ENST00000550411 WDR97A6NE52 1622 aa12.59□□□□□ -0.39
CBX5-204ENST00000550411 POLA1P09884 1462 aaPredicted RBP12.58□□□□□ -0.4
CBX5-204ENST00000550411 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.45e-7■■■■□ 19.7
CBX5-204ENST00000550411 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
CBX5-204ENST00000550411 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
CBX5-204ENST00000550411 FGD5Q6ZNL6 1462 aa12.5□□□□□ -0.41
CBX5-204ENST00000550411 SYNJ1O43426 1573 aa12.49□□□□□ -0.41
CBX5-204ENST00000550411 ARAP1Q96P48 1450 aa12.49□□□□□ -0.41
CBX5-204ENST00000550411 SOGA1O94964 1423 aa12.48□□□□□ -0.41
CBX5-204ENST00000550411 CUX1P39880 1505 aa12.47□□□□□ -0.41
CBX5-204ENST00000550411 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
CBX5-204ENST00000550411 FBLN2P98095 1184 aa12.47□□□□□ -0.41
CBX5-204ENST00000550411 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
CBX5-204ENST00000550411 SNAPC4Q5SXM2 1469 aa12.46□□□□□ -0.41
CBX5-204ENST00000550411 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
CBX5-204ENST00000550411 TDRD9Q8NDG6 1382 aaKnown RBP12.44□□□□□ -0.42
CBX5-204ENST00000550411 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
CBX5-204ENST00000550411 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
CBX5-204ENST00000550411 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
CBX5-204ENST00000550411 BIVM-ERCC5R4GMW8 1640 aa12.39□□□□□ -0.43
CBX5-204ENST00000550411 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
CBX5-204ENST00000550411 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
CBX5-204ENST00000550411 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
CBX5-204ENST00000550411 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
CBX5-204ENST00000550411 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
CBX5-204ENST00000550411 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
CBX5-204ENST00000550411 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
CBX5-204ENST00000550411 TOP2BQ02880 1626 aa12.32□□□□□ -0.44
CBX5-204ENST00000550411 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms