RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
CBX5-202ENST00000439541 CCDC180Q9P1Z9 1646 aa20.45■□□□□ 0.86
CBX5-202ENST00000439541 ABCC9O60706 1549 aa19.62■□□□□ 0.73
CBX5-202ENST00000439541 ZCCHC6Q5VYS8 1495 aaKnown RBP19.56■□□□□ 0.72
CBX5-202ENST00000439541 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
CBX5-202ENST00000439541 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
CBX5-202ENST00000439541 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.65
CBX5-202ENST00000439541 NACADO15069 1562 aa19.08■□□□□ 0.64
CBX5-202ENST00000439541 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
CBX5-202ENST00000439541 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
CBX5-202ENST00000439541 SCRIBQ14160 1630 aa18.84■□□□□ 0.61
CBX5-202ENST00000439541 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
CBX5-202ENST00000439541 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
CBX5-202ENST00000439541 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
CBX5-202ENST00000439541 CECR2Q9BXF3 1484 aa18.17■□□□□ 0.5
CBX5-202ENST00000439541 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
CBX5-202ENST00000439541 BAZ1AQ9NRL2 1556 aaPredicted RBP18.01■□□□□ 0.47
CBX5-202ENST00000439541 SMARCA4P51532 1647 aa18■□□□□ 0.47
CBX5-202ENST00000439541 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
CBX5-202ENST00000439541 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
CBX5-202ENST00000439541 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
CBX5-202ENST00000439541 WIZO95785 1651 aa17.88■□□□□ 0.45
CBX5-202ENST00000439541 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
CBX5-202ENST00000439541 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
CBX5-202ENST00000439541 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
CBX5-202ENST00000439541 SMARCA2P51531 1590 aa17.71■□□□□ 0.43
CBX5-202ENST00000439541 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
CBX5-202ENST00000439541 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
CBX5-202ENST00000439541 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
CBX5-202ENST00000439541 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
CBX5-202ENST00000439541 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
CBX5-202ENST00000439541 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
CBX5-202ENST00000439541 CFTRP13569 1480 aa17.16■□□□□ 0.34
CBX5-202ENST00000439541 NESP48681 1621 aa17.15■□□□□ 0.34
CBX5-202ENST00000439541 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
CBX5-202ENST00000439541 PRDM2Q13029 1718 aa17.08■□□□□ 0.33
CBX5-202ENST00000439541 ABCC8Q09428 1581 aa17.08■□□□□ 0.32
CBX5-202ENST00000439541 LAMC3Q9Y6N6 1575 aa17.07■□□□□ 0.32
CBX5-202ENST00000439541 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
CBX5-202ENST00000439541 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
CBX5-202ENST00000439541 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
CBX5-202ENST00000439541 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
CBX5-202ENST00000439541 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
CBX5-202ENST00000439541 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
CBX5-202ENST00000439541 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
CBX5-202ENST00000439541 CUX1P39880 1505 aa16.89■□□□□ 0.29
CBX5-202ENST00000439541 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
CBX5-202ENST00000439541 TOP2BQ02880 1626 aa16.83■□□□□ 0.29
CBX5-202ENST00000439541 BIVM-ERCC5R4GMW8 1640 aa16.83■□□□□ 0.29
CBX5-202ENST00000439541 ERCC6Q03468 1493 aa16.82■□□□□ 0.28
CBX5-202ENST00000439541 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
CBX5-202ENST00000439541 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
CBX5-202ENST00000439541 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
CBX5-202ENST00000439541 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
CBX5-202ENST00000439541 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
CBX5-202ENST00000439541 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
CBX5-202ENST00000439541 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
CBX5-202ENST00000439541 WDR62O43379 1518 aa16.7■□□□□ 0.26
CBX5-202ENST00000439541 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
CBX5-202ENST00000439541 SOGA1O94964 1423 aa16.66■□□□□ 0.26
CBX5-202ENST00000439541 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
CBX5-202ENST00000439541 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
CBX5-202ENST00000439541 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
CBX5-202ENST00000439541 CUX2O14529 1486 aa16.59■□□□□ 0.25
CBX5-202ENST00000439541 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
CBX5-202ENST00000439541 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
CBX5-202ENST00000439541 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
CBX5-202ENST00000439541 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
CBX5-202ENST00000439541 EEA1Q15075 1411 aa16.5■□□□□ 0.23
CBX5-202ENST00000439541 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
CBX5-202ENST00000439541 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
CBX5-202ENST00000439541 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
CBX5-202ENST00000439541 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
CBX5-202ENST00000439541 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
CBX5-202ENST00000439541 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
CBX5-202ENST00000439541 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
CBX5-202ENST00000439541 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.225e-7■■■■□ 19.7
CBX5-202ENST00000439541 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
CBX5-202ENST00000439541 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
CBX5-202ENST00000439541 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
CBX5-202ENST00000439541 IGF1RP08069 1367 aa16.38■□□□□ 0.21
CBX5-202ENST00000439541 KIF21BO75037 1637 aa16.36■□□□□ 0.21
CBX5-202ENST00000439541 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
CBX5-202ENST00000439541 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
CBX5-202ENST00000439541 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
CBX5-202ENST00000439541 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
CBX5-202ENST00000439541 GOLGA3Q08378 1498 aa16.31■□□□□ 0.2
CBX5-202ENST00000439541 CUL7Q14999 1698 aa16.31■□□□□ 0.2
CBX5-202ENST00000439541 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
CBX5-202ENST00000439541 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
CBX5-202ENST00000439541 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
CBX5-202ENST00000439541 UBTFP17480 764 aaKnown RBP16.22■□□□□ 0.19
CBX5-202ENST00000439541 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
CBX5-202ENST00000439541 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
CBX5-202ENST00000439541 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
CBX5-202ENST00000439541 SYNJ2O15056 1496 aa16.15■□□□□ 0.18
CBX5-202ENST00000439541 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
CBX5-202ENST00000439541 CEP162Q5TB80 1403 aa16.13■□□□□ 0.17
CBX5-202ENST00000439541 FBLN2P98095 1184 aa16.12■□□□□ 0.17
CBX5-202ENST00000439541 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms