RNA–Protein interactions for RNA: ENST00000533056.5

CHID1-221, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-221ENST00000533056 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
CHID1-221ENST00000533056 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
CHID1-221ENST00000533056 ABCC9O60706 1549 aa19.75■□□□□ 0.75
CHID1-221ENST00000533056 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
CHID1-221ENST00000533056 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
CHID1-221ENST00000533056 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
CHID1-221ENST00000533056 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
CHID1-221ENST00000533056 NACADO15069 1562 aa18.59■□□□□ 0.57
CHID1-221ENST00000533056 MYO15BQ96JP2 1530 aa18.59■□□□□ 0.57
CHID1-221ENST00000533056 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
CHID1-221ENST00000533056 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHID1-221ENST00000533056 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
CHID1-221ENST00000533056 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
CHID1-221ENST00000533056 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
CHID1-221ENST00000533056 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
CHID1-221ENST00000533056 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
CHID1-221ENST00000533056 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
CHID1-221ENST00000533056 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
CHID1-221ENST00000533056 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
CHID1-221ENST00000533056 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
CHID1-221ENST00000533056 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
CHID1-221ENST00000533056 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
CHID1-221ENST00000533056 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
CHID1-221ENST00000533056 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
CHID1-221ENST00000533056 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
CHID1-221ENST00000533056 WIZO95785 1651 aa17.17■□□□□ 0.34
CHID1-221ENST00000533056 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
CHID1-221ENST00000533056 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
CHID1-221ENST00000533056 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
CHID1-221ENST00000533056 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
CHID1-221ENST00000533056 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
CHID1-221ENST00000533056 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
CHID1-221ENST00000533056 DNAJC5Q9H3Z4 198 aa16.99■□□□□ 0.31
CHID1-221ENST00000533056 NESP48681 1621 aa16.98■□□□□ 0.31
CHID1-221ENST00000533056 CUX2O14529 1486 aa16.96■□□□□ 0.31
CHID1-221ENST00000533056 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
CHID1-221ENST00000533056 THOC2Q8NI27 1593 aaKnown RBP16.8■□□□□ 0.28
CHID1-221ENST00000533056 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
CHID1-221ENST00000533056 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
CHID1-221ENST00000533056 PDS5BQ9NTI5 1447 aa16.71■□□□□ 0.27
CHID1-221ENST00000533056 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
CHID1-221ENST00000533056 CFTRP13569 1480 aa16.62■□□□□ 0.25
CHID1-221ENST00000533056 MRC2Q9UBG0 1479 aa16.57■□□□□ 0.24
CHID1-221ENST00000533056 WDR62O43379 1518 aa16.54■□□□□ 0.24
CHID1-221ENST00000533056 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
CHID1-221ENST00000533056 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
CHID1-221ENST00000533056 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
CHID1-221ENST00000533056 URB2Q14146 1524 aaKnown RBP16.4■□□□□ 0.22
CHID1-221ENST00000533056 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
CHID1-221ENST00000533056 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
CHID1-221ENST00000533056 WRNQ14191 1432 aaPredicted RBP eCLIP16.28■□□□□ 0.2
CHID1-221ENST00000533056 CUX1P39880 1505 aa16.26■□□□□ 0.19
CHID1-221ENST00000533056 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
CHID1-221ENST00000533056 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
CHID1-221ENST00000533056 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
CHID1-221ENST00000533056 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
CHID1-221ENST00000533056 BIVM-ERCC5R4GMW8 1640 aa16.22■□□□□ 0.19
CHID1-221ENST00000533056 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
CHID1-221ENST00000533056 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
CHID1-221ENST00000533056 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
CHID1-221ENST00000533056 IFT140Q96RY7 1462 aa16.17■□□□□ 0.18
CHID1-221ENST00000533056 FGD5Q6ZNL6 1462 aa16.13■□□□□ 0.17
CHID1-221ENST00000533056 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
CHID1-221ENST00000533056 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
CHID1-221ENST00000533056 TARBP1Q13395 1621 aaKnown RBP16.07■□□□□ 0.16
CHID1-221ENST00000533056 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■■■■ 33.3
CHID1-221ENST00000533056 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
CHID1-221ENST00000533056 SOGA1O94964 1423 aa16.02■□□□□ 0.16
CHID1-221ENST00000533056 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
CHID1-221ENST00000533056 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
CHID1-221ENST00000533056 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
CHID1-221ENST00000533056 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
CHID1-221ENST00000533056 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
CHID1-221ENST00000533056 CHD1O14646 1710 aa15.98■□□□□ 0.15
CHID1-221ENST00000533056 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
CHID1-221ENST00000533056 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
CHID1-221ENST00000533056 FBLN2P98095 1184 aa15.95■□□□□ 0.14
CHID1-221ENST00000533056 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
CHID1-221ENST00000533056 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
CHID1-221ENST00000533056 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
CHID1-221ENST00000533056 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
CHID1-221ENST00000533056 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
CHID1-221ENST00000533056 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
CHID1-221ENST00000533056 EEA1Q15075 1411 aa15.85■□□□□ 0.13
CHID1-221ENST00000533056 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
CHID1-221ENST00000533056 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
CHID1-221ENST00000533056 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
CHID1-221ENST00000533056 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
CHID1-221ENST00000533056 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
CHID1-221ENST00000533056 IGF1RP08069 1367 aa15.79■□□□□ 0.12
CHID1-221ENST00000533056 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
CHID1-221ENST00000533056 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
CHID1-221ENST00000533056 FAM9AQ8IZU1 332 aaPredicted RBP15.75■□□□□ 0.11
CHID1-221ENST00000533056 SYNJ2O15056 1496 aa15.75■□□□□ 0.11
CHID1-221ENST00000533056 CUL7Q14999 1698 aa15.74■□□□□ 0.11
CHID1-221ENST00000533056 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
CHID1-221ENST00000533056 ADAMTS12P58397 1594 aa15.73■□□□□ 0.11
CHID1-221ENST00000533056 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
CHID1-221ENST00000533056 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
CHID1-221ENST00000533056 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms