RNA–Protein interactions for RNA: ENST00000614012.4

MR1-208, Transcript of major histocompatibility complex, class I-related, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MR1, Length 7,860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MR1-208ENST00000614012 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
MR1-208ENST00000614012 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.14
MR1-208ENST00000614012 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.16
MR1-208ENST00000614012 DCAF1Q9Y4B6 1507 aa13.97□□□□□ -0.17
MR1-208ENST00000614012 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
MR1-208ENST00000614012 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
MR1-208ENST00000614012 NACADO15069 1562 aa13.5□□□□□ -0.25
MR1-208ENST00000614012 DCAF8L2P0C7V8 631 aa13.27□□□□□ -0.29
MR1-208ENST00000614012 RB1CC1Q8TDY2 1594 aa13.27□□□□□ -0.29
MR1-208ENST00000614012 FAM9AQ8IZU1 332 aaPredicted RBP12.89□□□□□ -0.35
MR1-208ENST00000614012 ABCC9O60706 1549 aa12.87□□□□□ -0.35
MR1-208ENST00000614012 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
MR1-208ENST00000614012 EEA1Q15075 1411 aa12.78□□□□□ -0.36
MR1-208ENST00000614012 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
MR1-208ENST00000614012 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
MR1-208ENST00000614012 SMARCA2P51531 1590 aa12.65□□□□□ -0.38
MR1-208ENST00000614012 SUPT5HO00267 1087 aaKnown RBP12.62□□□□□ -0.39
MR1-208ENST00000614012 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
MR1-208ENST00000614012 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
MR1-208ENST00000614012 NCAPD3P42695 1498 aa12.45□□□□□ -0.42
MR1-208ENST00000614012 ABCC8Q09428 1581 aa12.41□□□□□ -0.42
MR1-208ENST00000614012 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
MR1-208ENST00000614012 HMGXB3Q12766 1538 aa12.39□□□□□ -0.43
MR1-208ENST00000614012 APLP2Q06481 763 aa12.38□□□□□ -0.43
MR1-208ENST00000614012 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
MR1-208ENST00000614012 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
MR1-208ENST00000614012 ZEB1P37275 1124 aaPredicted RBP12.28□□□□□ -0.44
MR1-208ENST00000614012 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
MR1-208ENST00000614012 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
MR1-208ENST00000614012 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
MR1-208ENST00000614012 SMARCA4P51532 1647 aa12.17□□□□□ -0.46
MR1-208ENST00000614012 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
MR1-208ENST00000614012 WRNQ14191 1432 aaPredicted RBP eCLIP12.15□□□□□ -0.46
MR1-208ENST00000614012 KIF27Q86VH2 1401 aa12.12□□□□□ -0.47
MR1-208ENST00000614012 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
MR1-208ENST00000614012 CEP164Q9UPV0 1460 aa12.07□□□□□ -0.48
MR1-208ENST00000614012 CDK11AQ9UQ88 783 aaPredicted RBP12.03□□□□□ -0.48
MR1-208ENST00000614012 CFTRP13569 1480 aa12.02□□□□□ -0.48
MR1-208ENST00000614012 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
MR1-208ENST00000614012 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
MR1-208ENST00000614012 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
MR1-208ENST00000614012 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
MR1-208ENST00000614012 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
MR1-208ENST00000614012 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
MR1-208ENST00000614012 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
MR1-208ENST00000614012 BICRAQ9NZM4 1560 aa11.93□□□□□ -0.5
MR1-208ENST00000614012 CLSPNQ9HAW4 1339 aa11.92□□□□□ -0.5
MR1-208ENST00000614012 UBTFP17480 764 aaKnown RBP11.89□□□□□ -0.51
MR1-208ENST00000614012 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
MR1-208ENST00000614012 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
MR1-208ENST00000614012 LAMC3Q9Y6N6 1575 aa11.86□□□□□ -0.51
MR1-208ENST00000614012 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
MR1-208ENST00000614012 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
MR1-208ENST00000614012 TRIM26Q12899 539 aaPredicted RBP11.81□□□□□ -0.52
MR1-208ENST00000614012 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
MR1-208ENST00000614012 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
MR1-208ENST00000614012 CARMIL2Q6F5E8 1435 aa11.75□□□□□ -0.53
MR1-208ENST00000614012 CLIP1P30622 1438 aa11.75□□□□□ -0.53
MR1-208ENST00000614012 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
MR1-208ENST00000614012 HRCP23327 699 aa11.72□□□□□ -0.53
MR1-208ENST00000614012 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
MR1-208ENST00000614012 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
MR1-208ENST00000614012 SLC24A1O60721 1099 aa11.71□□□□□ -0.54
MR1-208ENST00000614012 FANCD2Q9BXW9 1451 aa11.69□□□□□ -0.54
MR1-208ENST00000614012 EFCAB5A4FU69 1503 aa11.68□□□□□ -0.54
MR1-208ENST00000614012 VPS8Q8N3P4 1428 aa11.68□□□□□ -0.54
MR1-208ENST00000614012 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
MR1-208ENST00000614012 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
MR1-208ENST00000614012 ABCA10Q8WWZ4 1543 aa11.67□□□□□ -0.54
MR1-208ENST00000614012 MAP3K1Q13233 1512 aa11.65□□□□□ -0.54
MR1-208ENST00000614012 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
MR1-208ENST00000614012 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
MR1-208ENST00000614012 TOP2BQ02880 1626 aa11.63□□□□□ -0.55
MR1-208ENST00000614012 GRIN2BQ13224 1484 aa11.62□□□□□ -0.55
MR1-208ENST00000614012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.55
MR1-208ENST00000614012 SCAF1Q9H7N4 1312 aaKnown RBP11.61□□□□□ -0.55
MR1-208ENST00000614012 CUX2O14529 1486 aa11.61□□□□□ -0.55
MR1-208ENST00000614012 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
MR1-208ENST00000614012 SOGA1O94964 1423 aa11.61□□□□□ -0.55
MR1-208ENST00000614012 KIF21BO75037 1637 aa11.61□□□□□ -0.55
MR1-208ENST00000614012 PRXQ9BXM0 1461 aa11.6□□□□□ -0.55
MR1-208ENST00000614012 MAGI1Q96QZ7 1491 aaPredicted RBP11.59□□□□□ -0.55
MR1-208ENST00000614012 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.56
MR1-208ENST00000614012 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
MR1-208ENST00000614012 WIZO95785 1651 aa11.53□□□□□ -0.56
MR1-208ENST00000614012 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.57
MR1-208ENST00000614012 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
MR1-208ENST00000614012 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
MR1-208ENST00000614012 KIAA0586Q9BVV6 1533 aa11.49□□□□□ -0.57
MR1-208ENST00000614012 TOPBP1Q92547 1522 aa11.49□□□□□ -0.57
MR1-208ENST00000614012 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
MR1-208ENST00000614012 GAPVD1Q14C86 1478 aa11.49□□□□□ -0.57
MR1-208ENST00000614012 CCDC18Q5T9S5 1454 aa11.49□□□□□ -0.57
MR1-208ENST00000614012 MTUS2Q5JR59 1369 aa11.48□□□□□ -0.57
MR1-208ENST00000614012 CUL7Q14999 1698 aa11.48□□□□□ -0.57
MR1-208ENST00000614012 IGF1RP08069 1367 aa11.47□□□□□ -0.57
MR1-208ENST00000614012 FGD5Q6ZNL6 1462 aa11.47□□□□□ -0.57
MR1-208ENST00000614012 PHLDB1Q86UU1 1377 aa11.46□□□□□ -0.58
MR1-208ENST00000614012 PLEKHH2Q8IVE3 1493 aa11.45□□□□□ -0.58
MR1-208ENST00000614012 BIVM-ERCC5R4GMW8 1640 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms