Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.916e-8■■■□□ 18.6
NCBP2P52298 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.156e-8■■■□□ 18.6
NCBP2P52298 CEP95-202ENST00000553956 2669 ntTSL 1 (best)3.57□□□□□ -1.846e-8■■■□□ 18.6
NCBP2P52298 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.012e-6■■■□□ 18.6
NCBP2P52298 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.022e-6■■■□□ 18.6
NCBP2P52298 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.77□□□□□ -0.042e-6■■■□□ 18.6
NCBP2P52298 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.487e-9■■■□□ 18.5
NCBP2P52298 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.367e-9■■■□□ 18.5
NCBP2P52298 CLK2-204ENST00000471047 701 ntTSL 39.24□□□□□ -0.937e-9■■■□□ 18.5
NCBP2P52298 GABPB1-AS1-206ENST00000619314 1076 nt20.78■□□□□ 0.926e-7■■■□□ 18.5
NCBP2P52298 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.964e-11■■■□□ 18.5
NCBP2P52298 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.78□□□□□ -1.324e-11■■■□□ 18.5
NCBP2P52298 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.16■□□□□ 0.662e-7■■■□□ 18.4
NCBP2P52298 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.462e-7■■■□□ 18.4
NCBP2P52298 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.442e-7■■■□□ 18.4
NCBP2P52298 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16■□□□□ 0.152e-7■■■□□ 18.4
NCBP2P52298 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.68■□□□□ 0.12e-7■■■□□ 18.4
NCBP2P52298 UQCC1-213ENST00000453855 1035 ntTSL 413.25□□□□□ -0.291e-9■■■□□ 18.4
NCBP2P52298 UQCC1-214ENST00000457259 1987 ntTSL 1 (best)11.71□□□□□ -0.531e-9■■■□□ 18.4
NCBP2P52298 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC11.07□□□□□ -0.641e-9■■■□□ 18.4
NCBP2P52298 CTBP1-214ENST00000514495 564 ntTSL 225.21■■□□□ 1.636e-7■■■□□ 18.4
NCBP2P52298 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.71■■□□□ 1.396e-7■■■□□ 18.4
NCBP2P52298 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.036e-7■■■□□ 18.4
NCBP2P52298 CTBP1-217ENST00000515399 985 ntTSL 318.17■□□□□ 0.56e-7■■■□□ 18.4
NCBP2P52298 CTBP1-208ENST00000506180 843 ntTSL 516.6■□□□□ 0.256e-7■■■□□ 18.4
NCBP2P52298 CTBP1-213ENST00000514210 856 ntTSL 213.95□□□□□ -0.186e-7■■■□□ 18.4
NCBP2P52298 CTBP1-212ENST00000513420 704 ntTSL 313.35□□□□□ -0.276e-7■■■□□ 18.4
NCBP2P52298 MT-TM-201ENST00000387377 68 ntBASIC-2.23□□□□□ -2.771e-323■■■□□ 18.4
NCBP2P52298 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.293e-8■■■□□ 18.4
NCBP2P52298 SH3D21-203ENST00000480549 3182 ntTSL 215.77■□□□□ 0.122e-6■■■□□ 18.4
NCBP2P52298 GIGYF2-216ENST00000428883 544 ntTSL 413.11□□□□□ -0.313e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-225ENST00000463554 1085 ntTSL 512.1□□□□□ -0.473e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-209ENST00000423659 2329 ntTSL 511.02□□□□□ -0.653e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.773e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-218ENST00000430720 561 ntTSL 49.58□□□□□ -0.883e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC9.32□□□□□ -0.923e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-214ENST00000427233 530 ntTSL 59.22□□□□□ -0.933e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC9.02□□□□□ -0.973e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.98□□□□□ -0.973e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.39□□□□□ -1.073e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-220ENST00000440945 2658 ntTSL 1 (best)8.33□□□□□ -1.083e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-235ENST00000476995 766 ntTSL 58.29□□□□□ -1.083e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-239ENST00000484409 367 ntTSL 36.77□□□□□ -1.333e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-232ENST00000474465 625 ntTSL 26.64□□□□□ -1.353e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-226ENST00000464402 529 ntTSL 45.99□□□□□ -1.453e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-212ENST00000425040 588 ntTSL 45.99□□□□□ -1.453e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.91□□□□□ -1.463e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-217ENST00000429187 606 ntTSL 35.89□□□□□ -1.473e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-223ENST00000456491 466 ntTSL 45.83□□□□□ -1.483e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-243ENST00000490229 863 ntTSL 55.1□□□□□ -1.593e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-236ENST00000482666 1261 ntTSL 1 (best)4.68□□□□□ -1.663e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-244ENST00000490612 567 ntTSL 44.63□□□□□ -1.673e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-207ENST00000421433 564 ntTSL 54.55□□□□□ -1.683e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-238ENST00000483164 577 ntTSL 54.11□□□□□ -1.753e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-227ENST00000464805 1196 ntTSL 1 (best)4.03□□□□□ -1.763e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-241ENST00000488734 796 ntTSL 33.96□□□□□ -1.783e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-233ENST00000475359 825 ntTSL 23.81□□□□□ -1.83e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-240ENST00000488629 562 ntTSL 43.49□□□□□ -1.853e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-245ENST00000492910 685 ntTSL 23.29□□□□□ -1.883e-18■■■□□ 18.4
NCBP2P52298 GIGYF2-242ENST00000489328 1116 ntTSL 52.66□□□□□ -1.983e-18■■■□□ 18.4
NCBP2P52298 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.425e-9■■■□□ 18.4
NCBP2P52298 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.295e-9■■■□□ 18.4
NCBP2P52298 ARRB1-211ENST00000533255 551 ntTSL 210.55□□□□□ -0.725e-9■■■□□ 18.4
NCBP2P52298 TRIM65-202ENST00000540128 886 ntTSL 320.44■□□□□ 0.862e-9■■■□□ 18.4
NCBP2P52298 XPO4-204ENST00000490513 914 ntTSL 418.67■□□□□ 0.582e-9■■■□□ 18.4
NCBP2P52298 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.97■□□□□ 0.472e-9■■■□□ 18.4
NCBP2P52298 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.452e-9■■■□□ 18.4
NCBP2P52298 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.192e-9■■■□□ 18.4
NCBP2P52298 GMFB-204ENST00000553952 710 ntTSL 211.21□□□□□ -0.612e-9■■■□□ 18.4
NCBP2P52298 XPO4-203ENST00000465018 367 ntTSL 310.74□□□□□ -0.692e-9■■■□□ 18.4
NCBP2P52298 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.762e-9■■■□□ 18.4
NCBP2P52298 GMFB-206ENST00000554247 605 ntTSL 410.23□□□□□ -0.772e-9■■■□□ 18.4
NCBP2P52298 GMFB-207ENST00000554682 298 ntTSL 510.23□□□□□ -0.772e-9■■■□□ 18.4
NCBP2P52298 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.182e-9■■■□□ 18.4
NCBP2P52298 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.712e-9■■■□□ 18.4
NCBP2P52298 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.74□□□□□ -1.972e-9■■■□□ 18.4
NCBP2P52298 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.6□□□□□ -1.992e-9■■■□□ 18.4
NCBP2P52298 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.042e-9■■■□□ 18.4
NCBP2P52298 NME4-209ENST00000460297 1652 ntTSL 522.78■■□□□ 1.243e-8■■■□□ 18.4
NCBP2P52298 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.194e-7■■■□□ 18.4
NCBP2P52298 NME4-204ENST00000433358 966 ntTSL 321.23■□□□□ 0.993e-8■■■□□ 18.4
NCBP2P52298 MBD3-211ENST00000592965 568 ntTSL 421.16■□□□□ 0.984e-7■■■□□ 18.4
NCBP2P52298 NME4-206ENST00000448828 1167 ntTSL 220.77■□□□□ 0.923e-8■■■□□ 18.4
NCBP2P52298 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.783e-8■■■□□ 18.4
NCBP2P52298 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.93■□□□□ 0.783e-8■■■□□ 18.4
NCBP2P52298 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.93■□□□□ 0.783e-8■■■□□ 18.4
NCBP2P52298 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.46■□□□□ 0.552e-8■■■□□ 18.4
NCBP2P52298 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.42e-8■■■□□ 18.4
NCBP2P52298 NME4-205ENST00000444498 1111 ntTSL 317.18■□□□□ 0.344e-8■■■□□ 18.4
NCBP2P52298 MBD3-204ENST00000585967 583 ntTSL 415.49■□□□□ 0.074e-7■■■□□ 18.4
NCBP2P52298 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.48■□□□□ 0.073e-8■■■□□ 18.4
NCBP2P52298 GDI1-212ENST00000485143 579 ntTSL 415.08■□□□□ 04e-7■■■□□ 18.4
NCBP2P52298 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.01□□□□□ -0.333e-8■■■□□ 18.4
NCBP2P52298 NME4-208ENST00000454619 719 ntTSL 512.75□□□□□ -0.373e-8■■■□□ 18.4
NCBP2P52298 COPB1-209ENST00000533096 547 ntTSL 411.64□□□□□ -0.554e-7■■■□□ 18.4
NCBP2P52298 COPB1-206ENST00000529210 607 ntTSL 410.99□□□□□ -0.651e-14■■■□□ 18.4
NCBP2P52298 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.891e-14■■■□□ 18.4
NCBP2P52298 COPB1-207ENST00000529866 729 ntTSL 29.22□□□□□ -0.931e-14■■■□□ 18.4
NCBP2P52298 GDI1-214ENST00000491154 4069 ntTSL 29.18□□□□□ -0.944e-7■■■□□ 18.4
NCBP2P52298 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.041e-14■■■□□ 18.4
Retrieved 100 of 18,329 protein–RNA pairs in 186.4 ms