RNA–Protein interactions for RNA: ENST00000554908.5

GMFB-208, Transcript of glia maturation factor beta, humanhuman

TSL 1 (best) BASIC

Gene GMFB, Length 6,721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMFB-208ENST00000554908 NISCHQ9Y2I1 1504 aa9.61□□□□□ -0.87
GMFB-208ENST00000554908 CCDC180Q9P1Z9 1646 aa8.57□□□□□ -1.04
GMFB-208ENST00000554908 DCAF1Q9Y4B6 1507 aa8.44□□□□□ -1.06
GMFB-208ENST00000554908 MYO15BQ96JP2 1530 aa8.35□□□□□ -1.07
GMFB-208ENST00000554908 ZCCHC6Q5VYS8 1495 aaKnown RBP8.33□□□□□ -1.08
GMFB-208ENST00000554908 EIF4G1Q04637 1599 aaKnown RBP8.19□□□□□ -1.1
GMFB-208ENST00000554908 UNC13AQ9UPW8 1703 aa7.99□□□□□ -1.13
GMFB-208ENST00000554908 BICRAQ9NZM4 1560 aa7.86□□□□□ -1.15
GMFB-208ENST00000554908 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
GMFB-208ENST00000554908 ABCC9O60706 1549 aa7.82□□□□□ -1.16
GMFB-208ENST00000554908 NACADO15069 1562 aa7.67□□□□□ -1.18
GMFB-208ENST00000554908 SHROOM4Q9ULL8 1493 aa7.45□□□□□ -1.22
GMFB-208ENST00000554908 BAZ1AQ9NRL2 1556 aaPredicted RBP7.43□□□□□ -1.22
GMFB-208ENST00000554908 SCRIBQ14160 1630 aa7.43□□□□□ -1.22
GMFB-208ENST00000554908 MROH2BQ7Z745 1585 aa7.42□□□□□ -1.22
GMFB-208ENST00000554908 RSF1Q96T23 1441 aaPredicted RBP7.42□□□□□ -1.22
GMFB-208ENST00000554908 CECR2Q9BXF3 1484 aa7.39□□□□□ -1.23
GMFB-208ENST00000554908 RB1CC1Q8TDY2 1594 aa7.37□□□□□ -1.23
GMFB-208ENST00000554908 SMARCA4P51532 1647 aa7.34□□□□□ -1.23
GMFB-208ENST00000554908 SMARCA2P51531 1590 aa7.33□□□□□ -1.24
GMFB-208ENST00000554908 WIZO95785 1651 aa7.31□□□□□ -1.24
GMFB-208ENST00000554908 PRDM2Q13029 1718 aa7.28□□□□□ -1.24
GMFB-208ENST00000554908 WDR97A6NE52 1622 aa7.26□□□□□ -1.25
GMFB-208ENST00000554908 DNAJC5BQ9UF47 199 aa7.25□□□□□ -1.25
GMFB-208ENST00000554908 BIVM-ERCC5R4GMW8 1640 aa7.22□□□□□ -1.25
GMFB-208ENST00000554908 TOP2AP11388 1531 aaKnown RBP7.2□□□□□ -1.26
GMFB-208ENST00000554908 HMGXB3Q12766 1538 aa7.19□□□□□ -1.26
GMFB-208ENST00000554908 LRRIQ1Q96JM4 1722 aa7.1□□□□□ -1.27
GMFB-208ENST00000554908 SYNJ1O43426 1573 aa7.08□□□□□ -1.28
GMFB-208ENST00000554908 NCAPD3P42695 1498 aa7.08□□□□□ -1.28
GMFB-208ENST00000554908 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
GMFB-208ENST00000554908 TOP2BQ02880 1626 aa7.03□□□□□ -1.28
GMFB-208ENST00000554908 CCDC88BA6NC98 1476 aa6.99□□□□□ -1.29
GMFB-208ENST00000554908 CFTRP13569 1480 aa6.96□□□□□ -1.3
GMFB-208ENST00000554908 CC2D2AQ9P2K1 1620 aa6.95□□□□□ -1.3
GMFB-208ENST00000554908 KDM5BQ9UGL1 1544 aa6.95□□□□□ -1.3
GMFB-208ENST00000554908 WRNQ14191 1432 aaPredicted RBP eCLIP6.94□□□□□ -1.3
GMFB-208ENST00000554908 TARBP1Q13395 1621 aaKnown RBP6.94□□□□□ -1.3
GMFB-208ENST00000554908 PRXQ9BXM0 1461 aa6.94□□□□□ -1.3
GMFB-208ENST00000554908 KIF21BO75037 1637 aa6.94□□□□□ -1.3
GMFB-208ENST00000554908 ABCA5Q8WWZ7 1642 aa6.93□□□□□ -1.3
GMFB-208ENST00000554908 ARHGEF11O15085 1522 aa6.9□□□□□ -1.3
GMFB-208ENST00000554908 CUX1P39880 1505 aa6.89□□□□□ -1.31
GMFB-208ENST00000554908 CUX2O14529 1486 aa6.87□□□□□ -1.31
GMFB-208ENST00000554908 DENND4BO75064 1496 aaPredicted RBP6.87□□□□□ -1.31
GMFB-208ENST00000554908 RUSC2Q8N2Y8 1516 aa6.87□□□□□ -1.31
GMFB-208ENST00000554908 CHIC1Q5VXU3 224 aa6.85□□□□□ -1.31
GMFB-208ENST00000554908 SAMD9Q5K651 1589 aa6.84□□□□□ -1.31
GMFB-208ENST00000554908 ABCC8Q09428 1581 aa6.82□□□□□ -1.32
GMFB-208ENST00000554908 ERICH3Q5RHP9 1530 aa6.8□□□□□ -1.32
GMFB-208ENST00000554908 THOC2Q8NI27 1593 aaKnown RBP6.79□□□□□ -1.32
GMFB-208ENST00000554908 PABPN1Q86U42 306 aaKnown RBP eCLIP6.77□□□□□ -1.33
GMFB-208ENST00000554908 NESP48681 1621 aa6.77□□□□□ -1.33
GMFB-208ENST00000554908 KIF21AQ7Z4S6 1674 aa6.77□□□□□ -1.33
GMFB-208ENST00000554908 MAP3K1Q13233 1512 aa6.73□□□□□ -1.33
GMFB-208ENST00000554908 SNAPC4Q5SXM2 1469 aa6.71□□□□□ -1.34
GMFB-208ENST00000554908 SHROOM2Q13796 1616 aa6.71□□□□□ -1.34
GMFB-208ENST00000554908 CFAP43Q8NDM7 1665 aa6.7□□□□□ -1.34
GMFB-208ENST00000554908 ABCA10Q8WWZ4 1543 aa6.68□□□□□ -1.34
GMFB-208ENST00000554908 URB2Q14146 1524 aaKnown RBP6.68□□□□□ -1.34
GMFB-208ENST00000554908 MAGI3Q5TCQ9 1506 aa6.67□□□□□ -1.34
GMFB-208ENST00000554908 ARAP1Q96P48 1450 aa6.66□□□□□ -1.34
GMFB-208ENST00000554908 SOGA1O94964 1423 aa6.66□□□□□ -1.34
GMFB-208ENST00000554908 BAZ1BQ9UIG0 1483 aaKnown RBP6.65□□□□□ -1.35
GMFB-208ENST00000554908 LAMC3Q9Y6N6 1575 aa6.64□□□□□ -1.35
GMFB-208ENST00000554908 WDR62O43379 1518 aa6.64□□□□□ -1.35
GMFB-208ENST00000554908 SRCAPQ6ZRS2 3230 aa6.62□□□□□ -1.35
GMFB-208ENST00000554908 DNMBPQ6XZF7 1577 aa6.61□□□□□ -1.35
GMFB-208ENST00000554908 CTTNBP2Q8WZ74 1663 aa6.58□□□□□ -1.36
GMFB-208ENST00000554908 ADCY10Q96PN6 1610 aa6.57□□□□□ -1.36
GMFB-208ENST00000554908 ARHGAP35Q9NRY4 1499 aa6.56□□□□□ -1.36
GMFB-208ENST00000554908 POLA1P09884 1462 aaPredicted RBP6.56□□□□□ -1.36
GMFB-208ENST00000554908 RAPGEF2Q9Y4G8 1499 aa6.55□□□□□ -1.36
GMFB-208ENST00000554908 MAPKBP1O60336 1514 aa6.55□□□□□ -1.36
GMFB-208ENST00000554908 TOPBP1Q92547 1522 aa6.54□□□□□ -1.36
GMFB-208ENST00000554908 PBRM1Q86U86 1689 aa6.53□□□□□ -1.36
GMFB-208ENST00000554908 EEA1Q15075 1411 aa6.53□□□□□ -1.36
GMFB-208ENST00000554908 ADAMTS12P58397 1594 aa6.52□□□□□ -1.36
GMFB-208ENST00000554908 AQRO60306 1485 aaKnown RBP eCLIP6.52□□□□□ -1.372e-10■■■■□ 22.5
GMFB-208ENST00000554908 CADPSQ9ULU8 1353 aa6.51□□□□□ -1.37
GMFB-208ENST00000554908 BCORL1Q5H9F3 1711 aa6.51□□□□□ -1.37
GMFB-208ENST00000554908 ZNF608Q9ULD9 1512 aaPredicted RBP6.51□□□□□ -1.37
GMFB-208ENST00000554908 CUL7Q14999 1698 aa6.51□□□□□ -1.37
GMFB-208ENST00000554908 RRBP1Q9P2E9 1410 aaKnown RBP6.51□□□□□ -1.37
GMFB-208ENST00000554908 DISP1Q96F81 1524 aa6.5□□□□□ -1.37
GMFB-208ENST00000554908 IGF1RP08069 1367 aa6.49□□□□□ -1.37
GMFB-208ENST00000554908 TNIKQ9UKE5 1360 aa6.49□□□□□ -1.37
GMFB-208ENST00000554908 GRIN2BQ13224 1484 aa6.49□□□□□ -1.37
GMFB-208ENST00000554908 ABCA8O94911 1581 aa6.48□□□□□ -1.37
GMFB-208ENST00000554908 UGGT2Q9NYU1 1516 aa6.47□□□□□ -1.37
GMFB-208ENST00000554908 GOLGB1Q14789 3259 aaKnown RBP6.47□□□□□ -1.37
GMFB-208ENST00000554908 CLIP1P30622 1438 aa6.46□□□□□ -1.37
GMFB-208ENST00000554908 CROCC2H7BZ55 1655 aa6.46□□□□□ -1.38
GMFB-208ENST00000554908 CLASP1Q7Z460 1538 aa6.46□□□□□ -1.38
GMFB-208ENST00000554908 IQGAP2Q13576 1575 aa6.46□□□□□ -1.38
GMFB-208ENST00000554908 KDM6BO15054 1643 aa6.45□□□□□ -1.38
GMFB-208ENST00000554908 POLR1AO95602 1720 aaPredicted RBP6.45□□□□□ -1.38
GMFB-208ENST00000554908 TIAM1Q13009 1591 aa6.44□□□□□ -1.38
GMFB-208ENST00000554908 MAGI2Q86UL8 1455 aa6.44□□□□□ -1.38
GMFB-208ENST00000554908 ZNF518AQ6AHZ1 1483 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms