RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 NISCHQ9Y2I1 1504 aa36.83■■■■□ 3.49
SH3D21-203ENST00000480549 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
SH3D21-203ENST00000480549 ZCCHC6Q5VYS8 1495 aaKnown RBP31.05■■■□□ 2.56
SH3D21-203ENST00000480549 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
SH3D21-203ENST00000480549 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
SH3D21-203ENST00000480549 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
SH3D21-203ENST00000480549 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
SH3D21-203ENST00000480549 ABCC9O60706 1549 aa29.76■■■□□ 2.35
SH3D21-203ENST00000480549 NACADO15069 1562 aa29.54■■■□□ 2.32
SH3D21-203ENST00000480549 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
SH3D21-203ENST00000480549 SCRIBQ14160 1630 aa29.45■■■□□ 2.31
SH3D21-203ENST00000480549 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
SH3D21-203ENST00000480549 UNC13AQ9UPW8 1703 aa28.78■■■□□ 2.2
SH3D21-203ENST00000480549 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
SH3D21-203ENST00000480549 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.18
SH3D21-203ENST00000480549 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
SH3D21-203ENST00000480549 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
SH3D21-203ENST00000480549 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
SH3D21-203ENST00000480549 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
SH3D21-203ENST00000480549 WIZO95785 1651 aa28.35■■■□□ 2.13
SH3D21-203ENST00000480549 SMARCA4P51532 1647 aa28.24■■■□□ 2.11
SH3D21-203ENST00000480549 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
SH3D21-203ENST00000480549 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
SH3D21-203ENST00000480549 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
SH3D21-203ENST00000480549 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
SH3D21-203ENST00000480549 SMARCA2P51531 1590 aa27.78■■■□□ 2.04
SH3D21-203ENST00000480549 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
SH3D21-203ENST00000480549 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
SH3D21-203ENST00000480549 ATAD2BQ9ULI0 1458 aa27.63■■■□□ 2.01
SH3D21-203ENST00000480549 BAZ1BQ9UIG0 1483 aaKnown RBP27.48■■□□□ 1.99
SH3D21-203ENST00000480549 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.98
SH3D21-203ENST00000480549 ABCC8Q09428 1581 aa27.36■■□□□ 1.97
SH3D21-203ENST00000480549 HMGXB3Q12766 1538 aa27.29■■□□□ 1.96
SH3D21-203ENST00000480549 NCAPD3P42695 1498 aa27.28■■□□□ 1.96
SH3D21-203ENST00000480549 PELP1Q8IZL8 1130 aaKnown RBP27.27■■□□□ 1.96
SH3D21-203ENST00000480549 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.95
SH3D21-203ENST00000480549 HRCP23327 699 aa27.13■■□□□ 1.93
SH3D21-203ENST00000480549 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.922e-6■■■■□ 22.3
SH3D21-203ENST00000480549 SYNJ1O43426 1573 aa26.99■■□□□ 1.91
SH3D21-203ENST00000480549 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
SH3D21-203ENST00000480549 SOGA1O94964 1423 aa26.91■■□□□ 1.9
SH3D21-203ENST00000480549 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
SH3D21-203ENST00000480549 EEA1Q15075 1411 aa26.84■■□□□ 1.89
SH3D21-203ENST00000480549 CFTRP13569 1480 aa26.83■■□□□ 1.88
SH3D21-203ENST00000480549 RUSC2Q8N2Y8 1516 aa26.82■■□□□ 1.88
SH3D21-203ENST00000480549 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
SH3D21-203ENST00000480549 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
SH3D21-203ENST00000480549 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
SH3D21-203ENST00000480549 PPARGC1BQ86YN6 1023 aaKnown RBP26.74■■□□□ 1.87
SH3D21-203ENST00000480549 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
SH3D21-203ENST00000480549 PCGF6Q9BYE7 350 aa26.66■■□□□ 1.86
SH3D21-203ENST00000480549 CUX1P39880 1505 aa26.63■■□□□ 1.85
SH3D21-203ENST00000480549 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
SH3D21-203ENST00000480549 KIF21BO75037 1637 aa26.55■■□□□ 1.84
SH3D21-203ENST00000480549 TNIKQ9UKE5 1360 aa26.54■■□□□ 1.84
SH3D21-203ENST00000480549 GOLGA3Q08378 1498 aa26.54■■□□□ 1.84
SH3D21-203ENST00000480549 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
SH3D21-203ENST00000480549 TRIM26Q12899 539 aaPredicted RBP26.48■■□□□ 1.83
SH3D21-203ENST00000480549 CEP162Q5TB80 1403 aa26.47■■□□□ 1.83
SH3D21-203ENST00000480549 MYT1Q01538 1121 aa26.4■■□□□ 1.82
SH3D21-203ENST00000480549 UBTFP17480 764 aaKnown RBP26.37■■□□□ 1.81
SH3D21-203ENST00000480549 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
SH3D21-203ENST00000480549 RAPGEF2Q9Y4G8 1499 aa26.34■■□□□ 1.81
SH3D21-203ENST00000480549 NESP48681 1621 aa26.32■■□□□ 1.8
SH3D21-203ENST00000480549 LAMC3Q9Y6N6 1575 aa26.28■■□□□ 1.8
SH3D21-203ENST00000480549 KIF27Q86VH2 1401 aa26.27■■□□□ 1.8
SH3D21-203ENST00000480549 PRXQ9BXM0 1461 aa26.27■■□□□ 1.8
SH3D21-203ENST00000480549 ERICH3Q5RHP9 1530 aa26.26■■□□□ 1.79
SH3D21-203ENST00000480549 FGD5Q6ZNL6 1462 aa26.24■■□□□ 1.79
SH3D21-203ENST00000480549 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.79
SH3D21-203ENST00000480549 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
SH3D21-203ENST00000480549 SCAF1Q9H7N4 1312 aaKnown RBP26.19■■□□□ 1.78
SH3D21-203ENST00000480549 CUX2O14529 1486 aa26.14■■□□□ 1.77
SH3D21-203ENST00000480549 CLIP1P30622 1438 aa26.14■■□□□ 1.77
SH3D21-203ENST00000480549 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
SH3D21-203ENST00000480549 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
SH3D21-203ENST00000480549 IGF1RP08069 1367 aa26.03■■□□□ 1.76
SH3D21-203ENST00000480549 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
SH3D21-203ENST00000480549 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
SH3D21-203ENST00000480549 PDS5BQ9NTI5 1447 aa26.01■■□□□ 1.75
SH3D21-203ENST00000480549 ABCA10Q8WWZ4 1543 aa26■■□□□ 1.75
SH3D21-203ENST00000480549 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
SH3D21-203ENST00000480549 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
SH3D21-203ENST00000480549 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
SH3D21-203ENST00000480549 CARMIL1Q5VZK9 1371 aa25.89■■□□□ 1.73
SH3D21-203ENST00000480549 ARAP1Q96P48 1450 aa25.88■■□□□ 1.73
SH3D21-203ENST00000480549 RANGAP1P46060 587 aaPredicted RBP25.87■■□□□ 1.73
SH3D21-203ENST00000480549 TTBK1Q5TCY1 1321 aaPredicted RBP25.81■■□□□ 1.72
SH3D21-203ENST00000480549 CUL7Q14999 1698 aa25.79■■□□□ 1.72
SH3D21-203ENST00000480549 ABCA5Q8WWZ7 1642 aa25.79■■□□□ 1.72
SH3D21-203ENST00000480549 ARHGAP35Q9NRY4 1499 aa25.78■■□□□ 1.72
SH3D21-203ENST00000480549 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
SH3D21-203ENST00000480549 MRC2Q9UBG0 1479 aa25.69■■□□□ 1.7
SH3D21-203ENST00000480549 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
SH3D21-203ENST00000480549 GAPVD1Q14C86 1478 aa25.66■■□□□ 1.7
SH3D21-203ENST00000480549 CTTNBP2Q8WZ74 1663 aa25.63■■□□□ 1.69
SH3D21-203ENST00000480549 APLP2Q06481 763 aa25.63■■□□□ 1.69
SH3D21-203ENST00000480549 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
SH3D21-203ENST00000480549 WDR62O43379 1518 aa25.57■■□□□ 1.68
SH3D21-203ENST00000480549 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms