RNA–Protein interactions for RNA: ENST00000628554.2

GMFB-210, Transcript of glia maturation factor beta, humanhuman

TSL 4 BASIC

Gene GMFB, Length 639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMFB-210ENST00000628554 AEBP2Q6ZN18 517 aaPredicted RBP23.98■■□□□ 1.43
GMFB-210ENST00000628554 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
GMFB-210ENST00000628554 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
GMFB-210ENST00000628554 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
GMFB-210ENST00000628554 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
GMFB-210ENST00000628554 FOXD1Q16676 465 aa18.81■□□□□ 0.6
GMFB-210ENST00000628554 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
GMFB-210ENST00000628554 ADRA2BP18089 450 aa18.2■□□□□ 0.5
GMFB-210ENST00000628554 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
GMFB-210ENST00000628554 MSH5O43196 834 aa17.2■□□□□ 0.34
GMFB-210ENST00000628554 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
GMFB-210ENST00000628554 KCNA4P22459 653 aa16.66■□□□□ 0.26
GMFB-210ENST00000628554 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
GMFB-210ENST00000628554 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
GMFB-210ENST00000628554 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
GMFB-210ENST00000628554 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
GMFB-210ENST00000628554 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
GMFB-210ENST00000628554 DMRT2Q9Y5R5 561 aa16.19■□□□□ 0.18
GMFB-210ENST00000628554 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
GMFB-210ENST00000628554 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
GMFB-210ENST00000628554 SLC4A1APQ9BWU0 796 aaKnown RBP15.84■□□□□ 0.13
GMFB-210ENST00000628554 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
GMFB-210ENST00000628554 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
GMFB-210ENST00000628554 POTEDQ86YR6 584 aa15.5■□□□□ 0.07
GMFB-210ENST00000628554 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
GMFB-210ENST00000628554 ZBTB22O15209 634 aa15.4■□□□□ 0.06
GMFB-210ENST00000628554 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
GMFB-210ENST00000628554 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
GMFB-210ENST00000628554 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
GMFB-210ENST00000628554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.015e-8■■■■□ 25.6
GMFB-210ENST00000628554 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
GMFB-210ENST00000628554 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
GMFB-210ENST00000628554 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
GMFB-210ENST00000628554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
GMFB-210ENST00000628554 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
GMFB-210ENST00000628554 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
GMFB-210ENST00000628554 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
GMFB-210ENST00000628554 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
GMFB-210ENST00000628554 C1QBPQ07021 282 aaKnown RBP14.59□□□□□ -0.07
GMFB-210ENST00000628554 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
GMFB-210ENST00000628554 APLP2Q06481 763 aa14.47□□□□□ -0.09
GMFB-210ENST00000628554 CAPN15O75808 1086 aa14.37□□□□□ -0.11
GMFB-210ENST00000628554 TRHP20396 242 aaPredicted RBP14.35□□□□□ -0.11
GMFB-210ENST00000628554 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
GMFB-210ENST00000628554 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
GMFB-210ENST00000628554 ABCB7O75027 752 aa14.16□□□□□ -0.14
GMFB-210ENST00000628554 DSG3P32926 999 aa14.15□□□□□ -0.14
GMFB-210ENST00000628554 POLA2Q14181 598 aa14.15□□□□□ -0.14
GMFB-210ENST00000628554 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
GMFB-210ENST00000628554 FBLN2P98095 1184 aa13.88□□□□□ -0.19
GMFB-210ENST00000628554 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
GMFB-210ENST00000628554 FKBP8Q14318 412 aa13.85□□□□□ -0.19
GMFB-210ENST00000628554 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
GMFB-210ENST00000628554 SPDYE4A6NLX3 237 aa13.68□□□□□ -0.22
GMFB-210ENST00000628554 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
GMFB-210ENST00000628554 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
GMFB-210ENST00000628554 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
GMFB-210ENST00000628554 PROM2Q8N271 834 aa13.53□□□□□ -0.24
GMFB-210ENST00000628554 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
GMFB-210ENST00000628554 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
GMFB-210ENST00000628554 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
GMFB-210ENST00000628554 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
GMFB-210ENST00000628554 AKT1S1Q96B36 256 aa13.29□□□□□ -0.28
GMFB-210ENST00000628554 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
GMFB-210ENST00000628554 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
GMFB-210ENST00000628554 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
GMFB-210ENST00000628554 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
GMFB-210ENST00000628554 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
GMFB-210ENST00000628554 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
GMFB-210ENST00000628554 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
GMFB-210ENST00000628554 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
GMFB-210ENST00000628554 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
GMFB-210ENST00000628554 MIER1Q8N108 512 aa12.92□□□□□ -0.34
GMFB-210ENST00000628554 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
GMFB-210ENST00000628554 RTN4Q9NQC3 1192 aaKnown RBP12.87□□□□□ -0.35
GMFB-210ENST00000628554 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
GMFB-210ENST00000628554 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
GMFB-210ENST00000628554 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
GMFB-210ENST00000628554 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
GMFB-210ENST00000628554 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
GMFB-210ENST00000628554 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
GMFB-210ENST00000628554 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
GMFB-210ENST00000628554 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
GMFB-210ENST00000628554 SPOCK2Q92563 424 aa12.75□□□□□ -0.37
GMFB-210ENST00000628554 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
GMFB-210ENST00000628554 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
GMFB-210ENST00000628554 PRKAR2AP13861 404 aaKnown RBP12.71□□□□□ -0.37
GMFB-210ENST00000628554 NUBP1P53384 320 aa12.65□□□□□ -0.38
GMFB-210ENST00000628554 PKD2Q13563 968 aa12.63□□□□□ -0.39
GMFB-210ENST00000628554 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
GMFB-210ENST00000628554 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
GMFB-210ENST00000628554 NPM1P06748 294 aaKnown RBP eCLIP12.56□□□□□ -0.4
GMFB-210ENST00000628554 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
GMFB-210ENST00000628554 FAM212AQ96EL1 285 aa12.48□□□□□ -0.41
GMFB-210ENST00000628554 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
GMFB-210ENST00000628554 GSE1Q14687 1217 aa12.46□□□□□ -0.41
GMFB-210ENST00000628554 ECM2O94769 699 aaPredicted RBP12.44□□□□□ -0.42
GMFB-210ENST00000628554 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
GMFB-210ENST00000628554 RGL2O15211 777 aa12.38□□□□□ -0.43
GMFB-210ENST00000628554 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms