Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.44■□□□□ 0.547e-8■□□□□ 10.6
XRCC6P12956 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.57e-8■□□□□ 10.6
XRCC6P12956 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.387e-8■□□□□ 10.6
XRCC6P12956 NPM1-208ENST00000521672 597 ntTSL 59.23□□□□□ -0.937e-8■□□□□ 10.6
XRCC6P12956 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.037e-8■□□□□ 10.6
XRCC6P12956 NPM1-205ENST00000518587 670 ntTSL 26.94□□□□□ -1.37e-8■□□□□ 10.6
XRCC6P12956 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.86□□□□□ -1.317e-8■□□□□ 10.6
XRCC6P12956 NPM1-211ENST00000523622 247 ntTSL 36.8□□□□□ -1.327e-8■□□□□ 10.6
XRCC6P12956 FARP1-224ENST00000598389 747 ntTSL 56.13□□□□□ -1.437e-8■□□□□ 10.6
XRCC6P12956 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6□□□□□ -1.457e-8■□□□□ 10.6
XRCC6P12956 NPM1-210ENST00000523339 268 ntTSL 24.02□□□□□ -1.777e-8■□□□□ 10.6
XRCC6P12956 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.612e-6■□□□□ 10.6
XRCC6P12956 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.712e-6■□□□□ 10.6
XRCC6P12956 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.772e-6■□□□□ 10.6
XRCC6P12956 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.952e-6■□□□□ 10.6
XRCC6P12956 TRIP10-206ENST00000596543 545 ntTSL 417.02■□□□□ 0.322e-6■□□□□ 10.6
XRCC6P12956 CBX4-203ENST00000494546 432 ntTSL 336.97■■■■□ 3.515e-8■□□□□ 10.6
XRCC6P12956 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC34.77■■■■□ 3.165e-8■□□□□ 10.6
XRCC6P12956 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.36■■■□□ 2.615e-8■□□□□ 10.6
XRCC6P12956 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC11.04□□□□□ -0.648e-9■□□□□ 10.6
XRCC6P12956 FLNA-216ENST00000490936 5374 ntTSL 1 (best)18.18■□□□□ 0.59e-10■□□□□ 10.6
XRCC6P12956 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.249e-10■□□□□ 10.6
XRCC6P12956 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.029e-10■□□□□ 10.6
XRCC6P12956 FLNA-206ENST00000420627 8225 ntTSL 514.89□□□□□ -0.039e-10■□□□□ 10.6
XRCC6P12956 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.069e-10■□□□□ 10.6
XRCC6P12956 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.169e-10■□□□□ 10.6
XRCC6P12956 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.229e-10■□□□□ 10.6
XRCC6P12956 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC13.51□□□□□ -0.259e-10■□□□□ 10.6
XRCC6P12956 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)25.14■■□□□ 1.614e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-214ENST00000503282 584 ntTSL 224.54■■□□□ 1.524e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-229ENST00000510129 582 ntTSL 323.84■■□□□ 1.414e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.44e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-220ENST00000505307 743 ntTSL 522.24■■□□□ 1.154e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-215ENST00000503418 662 ntTSL 421.59■■□□□ 1.054e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-213ENST00000502690 599 ntTSL 418.85■□□□□ 0.614e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.574e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.394e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-228ENST00000508974 568 ntTSL 416.43■□□□□ 0.224e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.134e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.414e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-232ENST00000514755 593 ntTSL 412.25□□□□□ -0.454e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC11.3□□□□□ -0.64e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-227ENST00000508818 584 ntTSL 211.22□□□□□ -0.614e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-223ENST00000508249 604 ntTSL 410.22□□□□□ -0.774e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.784e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC9.61□□□□□ -0.874e-17■□□□□ 10.6
XRCC6P12956 UBE2D3-222ENST00000508238 547 ntTSL 48.89□□□□□ -0.994e-17■□□□□ 10.6
XRCC6P12956 AHNAK-203ENST00000525875 793 ntTSL 311.97□□□□□ -0.491e-8■□□□□ 10.6
XRCC6P12956 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.255e-8■□□□□ 10.5
XRCC6P12956 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.215e-8■□□□□ 10.5
XRCC6P12956 CLASP2-209ENST00000468888 6978 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.325e-8■□□□□ 10.5
XRCC6P12956 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.06■□□□□ 05e-24■□□□□ 10.5
XRCC6P12956 LRRC75A-AS1-215ENST00000491009 863 ntTSL 214.39□□□□□ -0.115e-24■□□□□ 10.5
XRCC6P12956 HJURP-203ENST00000414924 1776 ntAPPRIS ALT2 TSL 421.77■■□□□ 1.081e-6■□□□□ 10.5
XRCC6P12956 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.371e-6■□□□□ 10.5
XRCC6P12956 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.171e-6■□□□□ 10.5
XRCC6P12956 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.131e-6■□□□□ 10.5
XRCC6P12956 NFE2L2-205ENST00000430047 451 ntTSL 326.26■■□□□ 1.794e-6■□□□□ 10.5
XRCC6P12956 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC20.5■□□□□ 0.874e-6■□□□□ 10.5
XRCC6P12956 NFE2L2-210ENST00000462023 521 ntTSL 217.34■□□□□ 0.374e-6■□□□□ 10.5
XRCC6P12956 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC12.3□□□□□ -0.444e-6■□□□□ 10.5
XRCC6P12956 NFE2L2-214ENST00000588123 814 ntTSL 510.5□□□□□ -0.734e-6■□□□□ 10.5
XRCC6P12956 NFE2L2-213ENST00000586532 942 ntTSL 55.21□□□□□ -1.584e-6■□□□□ 10.5
XRCC6P12956 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.334e-6■□□□□ 10.5
XRCC6P12956 TRIP10-203ENST00000595305 2068 ntTSL 219.26■□□□□ 0.674e-6■□□□□ 10.5
XRCC6P12956 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.24■□□□□ 0.674e-6■□□□□ 10.5
XRCC6P12956 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.95■□□□□ 0.624e-6■□□□□ 10.5
XRCC6P12956 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.78■□□□□ 0.64e-6■□□□□ 10.5
XRCC6P12956 TRIP10-212ENST00000600677 2022 ntTSL 518.06■□□□□ 0.484e-6■□□□□ 10.5
XRCC6P12956 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)10.76□□□□□ -0.694e-6■□□□□ 10.5
XRCC6P12956 CCDC26-202ENST00000520048 904 ntTSL 39.45□□□□□ -0.94e-6■□□□□ 10.5
XRCC6P12956 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.47□□□□□ -1.374e-6■□□□□ 10.5
XRCC6P12956 TNRC6A-207ENST00000491718 7956 ntTSL 1 (best)7.95□□□□□ -1.147e-10■□□□□ 10.5
XRCC6P12956 SOD1-203ENST00000470944 1746 ntTSL 232.2■■■□□ 2.741e-9■□□□□ 10.5
XRCC6P12956 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.393e-7■□□□□ 10.5
XRCC6P12956 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.23■■□□□ 1.313e-7■□□□□ 10.5
XRCC6P12956 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.91■□□□□ 0.621e-9■□□□□ 10.5
XRCC6P12956 KIF22-205ENST00000563666 1603 ntTSL 518.38■□□□□ 0.533e-7■□□□□ 10.5
XRCC6P12956 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.31e-9■□□□□ 10.5
XRCC6P12956 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.89■□□□□ 0.293e-7■□□□□ 10.5
XRCC6P12956 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC15.67■□□□□ 0.13e-7■□□□□ 10.5
XRCC6P12956 SOD1-204ENST00000476106 586 ntTSL 515.23■□□□□ 0.031e-9■□□□□ 10.5
XRCC6P12956 SOD1-202ENST00000389995 865 ntTSL 3 BASIC12.93□□□□□ -0.341e-9■□□□□ 10.5
XRCC6P12956 FAM182B-205ENST00000478164 992 ntTSL 517.43■□□□□ 0.383e-11■□□□□ 10.5
XRCC6P12956 FAM182B-207ENST00000582267 832 ntTSL 515.77■□□□□ 0.123e-11■□□□□ 10.5
XRCC6P12956 PTMS-205ENST00000540828 644 ntTSL 1 (best)23.57■■□□□ 1.362e-9■□□□□ 10.4
XRCC6P12956 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.222e-9■□□□□ 10.4
XRCC6P12956 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.012e-9■□□□□ 10.4
XRCC6P12956 PTMS-203ENST00000538057 976 ntTSL 221.27■■□□□ 12e-9■□□□□ 10.4
XRCC6P12956 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.39■□□□□ 0.532e-9■□□□□ 10.4
XRCC6P12956 PTMS-204ENST00000540667 820 ntTSL 214.91□□□□□ -0.022e-9■□□□□ 10.4
XRCC6P12956 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)25.44■■□□□ 1.662e-8■□□□□ 10.4
XRCC6P12956 HNRNPDL-209ENST00000630114 1433 ntTSL 522.97■■□□□ 1.272e-8■□□□□ 10.4
XRCC6P12956 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.692e-8■□□□□ 10.4
XRCC6P12956 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.442e-8■□□□□ 10.4
XRCC6P12956 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC16.33■□□□□ 0.22e-8■□□□□ 10.4
XRCC6P12956 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.212e-8■□□□□ 10.4
XRCC6P12956 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.444e-8■□□□□ 10.4
XRCC6P12956 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.786e-40■□□□□ 10.4
XRCC6P12956 GMPR-203ENST00000543191 675 ntTSL 211.37□□□□□ -0.596e-40■□□□□ 10.4
Retrieved 100 of 6,788 protein–RNA pairs in 34.8 ms