RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
SOD1-204ENST00000476106 ABCC9O60706 1549 aa29.71■■■□□ 2.35
SOD1-204ENST00000476106 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
SOD1-204ENST00000476106 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
SOD1-204ENST00000476106 RB1CC1Q8TDY2 1594 aa27.84■■■□□ 2.05
SOD1-204ENST00000476106 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
SOD1-204ENST00000476106 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
SOD1-204ENST00000476106 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
SOD1-204ENST00000476106 NACADO15069 1562 aa27.48■■□□□ 1.99
SOD1-204ENST00000476106 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
SOD1-204ENST00000476106 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
SOD1-204ENST00000476106 DCAF1Q9Y4B6 1507 aa27.25■■□□□ 1.95
SOD1-204ENST00000476106 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
SOD1-204ENST00000476106 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
SOD1-204ENST00000476106 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
SOD1-204ENST00000476106 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
SOD1-204ENST00000476106 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
SOD1-204ENST00000476106 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
SOD1-204ENST00000476106 EIF4G1Q04637 1599 aaKnown RBP26.46■■□□□ 1.83
SOD1-204ENST00000476106 CUX2O14529 1486 aa26.11■■□□□ 1.77
SOD1-204ENST00000476106 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
SOD1-204ENST00000476106 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
SOD1-204ENST00000476106 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
SOD1-204ENST00000476106 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
SOD1-204ENST00000476106 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
SOD1-204ENST00000476106 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
SOD1-204ENST00000476106 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
SOD1-204ENST00000476106 WIZO95785 1651 aa25.35■■□□□ 1.65
SOD1-204ENST00000476106 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
SOD1-204ENST00000476106 PEG3Q9GZU2 1588 aa25.31■■□□□ 1.64
SOD1-204ENST00000476106 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
SOD1-204ENST00000476106 BAZ1BQ9UIG0 1483 aaKnown RBP25.26■■□□□ 1.63
SOD1-204ENST00000476106 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
SOD1-204ENST00000476106 NESP48681 1621 aa25.19■■□□□ 1.62
SOD1-204ENST00000476106 THOC2Q8NI27 1593 aaKnown RBP25.11■■□□□ 1.61
SOD1-204ENST00000476106 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
SOD1-204ENST00000476106 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
SOD1-204ENST00000476106 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
SOD1-204ENST00000476106 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
SOD1-204ENST00000476106 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
SOD1-204ENST00000476106 KIF21AQ7Z4S6 1674 aa24.76■■□□□ 1.55
SOD1-204ENST00000476106 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
SOD1-204ENST00000476106 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
SOD1-204ENST00000476106 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
SOD1-204ENST00000476106 WDR62O43379 1518 aa24.59■■□□□ 1.53
SOD1-204ENST00000476106 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
SOD1-204ENST00000476106 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
SOD1-204ENST00000476106 CFTRP13569 1480 aa24.47■■□□□ 1.51
SOD1-204ENST00000476106 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
SOD1-204ENST00000476106 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
SOD1-204ENST00000476106 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
SOD1-204ENST00000476106 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
SOD1-204ENST00000476106 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
SOD1-204ENST00000476106 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
SOD1-204ENST00000476106 ARHGEF11O15085 1522 aa24.3■■□□□ 1.48
SOD1-204ENST00000476106 CYB5RLQ6IPT4 315 aa24.29■■□□□ 1.48
SOD1-204ENST00000476106 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
SOD1-204ENST00000476106 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
SOD1-204ENST00000476106 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
SOD1-204ENST00000476106 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
SOD1-204ENST00000476106 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
SOD1-204ENST00000476106 CUX1P39880 1505 aa23.94■■□□□ 1.42
SOD1-204ENST00000476106 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
SOD1-204ENST00000476106 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
SOD1-204ENST00000476106 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
SOD1-204ENST00000476106 BIVM-ERCC5R4GMW8 1640 aa23.83■■□□□ 1.41
SOD1-204ENST00000476106 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
SOD1-204ENST00000476106 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
SOD1-204ENST00000476106 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
SOD1-204ENST00000476106 TOP2BQ02880 1626 aa23.78■■□□□ 1.4
SOD1-204ENST00000476106 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
SOD1-204ENST00000476106 FBLN2P98095 1184 aa23.74■■□□□ 1.39
SOD1-204ENST00000476106 RAD54L2Q9Y4B4 1467 aa23.74■■□□□ 1.39
SOD1-204ENST00000476106 EIF4G3O43432 1585 aaKnown RBP23.73■■□□□ 1.39
SOD1-204ENST00000476106 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
SOD1-204ENST00000476106 SOGA1O94964 1423 aa23.67■■□□□ 1.38
SOD1-204ENST00000476106 CHD1O14646 1710 aa23.67■■□□□ 1.38
SOD1-204ENST00000476106 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.377e-7■■■■■ 35.6
SOD1-204ENST00000476106 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
SOD1-204ENST00000476106 ILDR1Q86SU0 546 aaPredicted RBP23.56■■□□□ 1.36
SOD1-204ENST00000476106 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
SOD1-204ENST00000476106 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
SOD1-204ENST00000476106 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
SOD1-204ENST00000476106 CLASP1Q7Z460 1538 aa23.44■■□□□ 1.34
SOD1-204ENST00000476106 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
SOD1-204ENST00000476106 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
SOD1-204ENST00000476106 SNAPC4Q5SXM2 1469 aa23.42■■□□□ 1.34
SOD1-204ENST00000476106 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
SOD1-204ENST00000476106 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
SOD1-204ENST00000476106 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
SOD1-204ENST00000476106 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
SOD1-204ENST00000476106 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
SOD1-204ENST00000476106 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
SOD1-204ENST00000476106 CUL7Q14999 1698 aa23.2■■□□□ 1.3
SOD1-204ENST00000476106 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
SOD1-204ENST00000476106 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
SOD1-204ENST00000476106 KDM4FA0A1W2PPD8 638 aa23.14■■□□□ 1.29
SOD1-204ENST00000476106 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
SOD1-204ENST00000476106 GRIN2AQ12879 1464 aa23.13■■□□□ 1.29
SOD1-204ENST00000476106 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms