RNA–Protein interactions for RNA: ENST00000490936.5

FLNA-216, Transcript of filamin A, humanhuman

TSL 1 (best)

Gene FLNA, Length 5,374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLNA-216ENST00000490936 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
FLNA-216ENST00000490936 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
FLNA-216ENST00000490936 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
FLNA-216ENST00000490936 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
FLNA-216ENST00000490936 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
FLNA-216ENST00000490936 APLP2Q06481 763 aa24.91■■□□□ 1.58
FLNA-216ENST00000490936 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
FLNA-216ENST00000490936 FAM9AQ8IZU1 332 aaPredicted RBP24.49■■□□□ 1.51
FLNA-216ENST00000490936 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
FLNA-216ENST00000490936 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.5
FLNA-216ENST00000490936 CENPBP07199 599 aaPredicted RBP24.28■■□□□ 1.48
FLNA-216ENST00000490936 TRIM41Q8WV44 630 aa24.2■■□□□ 1.47
FLNA-216ENST00000490936 TTBK1Q5TCY1 1321 aaPredicted RBP24.06■■□□□ 1.44
FLNA-216ENST00000490936 CCER1Q8TC90 406 aaPredicted RBP24.06■■□□□ 1.44
FLNA-216ENST00000490936 ERICH6Q7L0X2 663 aa23.92■■□□□ 1.42
FLNA-216ENST00000490936 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
FLNA-216ENST00000490936 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
FLNA-216ENST00000490936 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
FLNA-216ENST00000490936 MYT1Q01538 1121 aa23.7■■□□□ 1.38
FLNA-216ENST00000490936 NEFLP07196 543 aa23.69■■□□□ 1.38
FLNA-216ENST00000490936 TRIM26Q12899 539 aaPredicted RBP23.62■■□□□ 1.37
FLNA-216ENST00000490936 HRCP23327 699 aa23.37■■□□□ 1.33
FLNA-216ENST00000490936 YTHDC1Q96MU7 727 aaKnown RBP23.37■■□□□ 1.33
FLNA-216ENST00000490936 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
FLNA-216ENST00000490936 PPARGC1BQ86YN6 1023 aaKnown RBP23.19■■□□□ 1.3
FLNA-216ENST00000490936 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
FLNA-216ENST00000490936 ITGAEP38570 1179 aa22.95■■□□□ 1.26
FLNA-216ENST00000490936 DAXXQ9UER7 740 aaPredicted RBP22.94■■□□□ 1.26
FLNA-216ENST00000490936 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
FLNA-216ENST00000490936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.89■■□□□ 1.25
FLNA-216ENST00000490936 POLR3GLQ9BT43 218 aa22.78■■□□□ 1.24
FLNA-216ENST00000490936 MYT1LQ9UL68 1186 aa22.77■■□□□ 1.23
FLNA-216ENST00000490936 DIEXFQ68CQ4 756 aaKnown RBP22.72■■□□□ 1.23
FLNA-216ENST00000490936 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
FLNA-216ENST00000490936 RTL5Q5HYW3 569 aaPredicted RBP22.47■■□□□ 1.19
FLNA-216ENST00000490936 ZNF316A6NFI3 1004 aaPredicted RBP22.4■■□□□ 1.18
FLNA-216ENST00000490936 TRIM52Q96A61 297 aa22.4■■□□□ 1.18
FLNA-216ENST00000490936 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
FLNA-216ENST00000490936 ABCC9O60706 1549 aa22.37■■□□□ 1.17
FLNA-216ENST00000490936 CLSPNQ9HAW4 1339 aa22.34■■□□□ 1.17
FLNA-216ENST00000490936 ANP32CO43423 234 aa22.33■■□□□ 1.17
FLNA-216ENST00000490936 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
FLNA-216ENST00000490936 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
FLNA-216ENST00000490936 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
FLNA-216ENST00000490936 GTF3C3Q9Y5Q9 886 aa22.2■■□□□ 1.14
FLNA-216ENST00000490936 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
FLNA-216ENST00000490936 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
FLNA-216ENST00000490936 BCANQ96GW7 911 aa22.02■■□□□ 1.12
FLNA-216ENST00000490936 ZNF326Q5BKZ1 582 aaKnown RBP22.02■■□□□ 1.12
FLNA-216ENST00000490936 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
FLNA-216ENST00000490936 ZBTB47Q9UFB7 747 aaPredicted RBP22.01■■□□□ 1.11
FLNA-216ENST00000490936 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
FLNA-216ENST00000490936 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
FLNA-216ENST00000490936 CANXP27824 592 aaKnown RBP21.87■■□□□ 1.09
FLNA-216ENST00000490936 NEFMP07197 916 aa21.87■■□□□ 1.09
FLNA-216ENST00000490936 FBLN2P98095 1184 aa21.84■■□□□ 1.09
FLNA-216ENST00000490936 ANP32AP39687 249 aaKnown RBP21.82■■□□□ 1.08
FLNA-216ENST00000490936 P3H3Q8IVL6 736 aa21.79■■□□□ 1.08
FLNA-216ENST00000490936 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
FLNA-216ENST00000490936 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
FLNA-216ENST00000490936 CCDC180Q9P1Z9 1646 aa21.68■■□□□ 1.06
FLNA-216ENST00000490936 ZNF777Q9ULD5 760 aaPredicted RBP21.66■■□□□ 1.06
FLNA-216ENST00000490936 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
FLNA-216ENST00000490936 FKBP8Q14318 412 aa21.57■■□□□ 1.04
FLNA-216ENST00000490936 HNRNPUQ00839 825 aaKnown RBP eCLIP21.53■■□□□ 1.04
FLNA-216ENST00000490936 EEA1Q15075 1411 aa21.5■■□□□ 1.03
FLNA-216ENST00000490936 SLC24A1O60721 1099 aa21.49■■□□□ 1.03
FLNA-216ENST00000490936 UPF2Q9HAU5 1272 aaKnown RBP21.49■■□□□ 1.03
FLNA-216ENST00000490936 DDX10Q13206 875 aaKnown RBP21.48■■□□□ 1.03
FLNA-216ENST00000490936 NPM2Q86SE8 214 aaKnown RBP21.46■■□□□ 1.03
FLNA-216ENST00000490936 ANP32BQ92688 251 aaKnown RBP21.45■■□□□ 1.02
FLNA-216ENST00000490936 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.44■■□□□ 1.02
FLNA-216ENST00000490936 CLIP1P30622 1438 aa21.42■■□□□ 1.02
FLNA-216ENST00000490936 FAM9BQ8IZU0 186 aa21.41■■□□□ 1.02
FLNA-216ENST00000490936 ESF1Q9H501 851 aaKnown RBP21.4■■□□□ 1.02
FLNA-216ENST00000490936 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
FLNA-216ENST00000490936 MTUS2Q5JR59 1369 aa21.38■■□□□ 1.01
FLNA-216ENST00000490936 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
FLNA-216ENST00000490936 BCL11AQ9H165 835 aa21.35■■□□□ 1.01
FLNA-216ENST00000490936 HSP90AA1P07900 732 aaKnown RBP21.35■■□□□ 1.01
FLNA-216ENST00000490936 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
FLNA-216ENST00000490936 TSPY4P0CV99 314 aa21.33■■□□□ 1.01
FLNA-216ENST00000490936 TSPY10P0CW01 314 aa21.33■■□□□ 1.01
FLNA-216ENST00000490936 NPM1P06748 294 aaKnown RBP eCLIP21.32■■□□□ 1
FLNA-216ENST00000490936 STAG3Q9UJ98 1225 aa21.32■■□□□ 1
FLNA-216ENST00000490936 CHGAP10645 457 aaKnown RBP21.32■■□□□ 1
FLNA-216ENST00000490936 WDR43Q15061 677 aaKnown RBP eCLIP21.3■■□□□ 1
FLNA-216ENST00000490936 RSF1Q96T23 1441 aaPredicted RBP21.3■■□□□ 1
FLNA-216ENST00000490936 MRS2Q9HD23 443 aa21.29■■□□□ 1
FLNA-216ENST00000490936 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
FLNA-216ENST00000490936 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
FLNA-216ENST00000490936 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.993e-8■□□□□ 10
FLNA-216ENST00000490936 CEP162Q5TB80 1403 aa21.23■□□□□ 0.99
FLNA-216ENST00000490936 MIER1Q8N108 512 aa21.2■□□□□ 0.98
FLNA-216ENST00000490936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
FLNA-216ENST00000490936 TNIKQ9UKE5 1360 aa21.16■□□□□ 0.98
FLNA-216ENST00000490936 SALL2Q9Y467 1007 aaPredicted RBP21.13■□□□□ 0.97
FLNA-216ENST00000490936 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
FLNA-216ENST00000490936 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
FLNA-216ENST00000490936 NACADO15069 1562 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms