RNA–Protein interactions for RNA: ENST00000444130.1

AP000561.1-201, humanhuman

TSL 5 BASIC

Gene AP000561.1, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000561.1-201ENST00000444130 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
AP000561.1-201ENST00000444130 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
AP000561.1-201ENST00000444130 ABCC9O60706 1549 aa21.39■■□□□ 1.02
AP000561.1-201ENST00000444130 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
AP000561.1-201ENST00000444130 NACADO15069 1562 aa20.58■□□□□ 0.88
AP000561.1-201ENST00000444130 MYO15BQ96JP2 1530 aa20.45■□□□□ 0.86
AP000561.1-201ENST00000444130 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
AP000561.1-201ENST00000444130 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
AP000561.1-201ENST00000444130 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
AP000561.1-201ENST00000444130 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
AP000561.1-201ENST00000444130 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
AP000561.1-201ENST00000444130 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
AP000561.1-201ENST00000444130 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
AP000561.1-201ENST00000444130 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
AP000561.1-201ENST00000444130 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
AP000561.1-201ENST00000444130 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
AP000561.1-201ENST00000444130 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
AP000561.1-201ENST00000444130 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
AP000561.1-201ENST00000444130 SMARCA4P51532 1647 aa18.99■□□□□ 0.63
AP000561.1-201ENST00000444130 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
AP000561.1-201ENST00000444130 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
AP000561.1-201ENST00000444130 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
AP000561.1-201ENST00000444130 ATAD2BQ9ULI0 1458 aa18.9■□□□□ 0.62
AP000561.1-201ENST00000444130 HMGXB3Q12766 1538 aa18.89■□□□□ 0.61
AP000561.1-201ENST00000444130 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
AP000561.1-201ENST00000444130 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
AP000561.1-201ENST00000444130 MROH2BQ7Z745 1585 aa18.75■□□□□ 0.59
AP000561.1-201ENST00000444130 WIZO95785 1651 aa18.54■□□□□ 0.56
AP000561.1-201ENST00000444130 ERCC6Q03468 1493 aa18.52■□□□□ 0.56
AP000561.1-201ENST00000444130 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
AP000561.1-201ENST00000444130 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
AP000561.1-201ENST00000444130 CUX2O14529 1486 aa18.46■□□□□ 0.54
AP000561.1-201ENST00000444130 NESP48681 1621 aa18.45■□□□□ 0.54
AP000561.1-201ENST00000444130 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
AP000561.1-201ENST00000444130 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
AP000561.1-201ENST00000444130 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
AP000561.1-201ENST00000444130 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
AP000561.1-201ENST00000444130 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
AP000561.1-201ENST00000444130 CFTRP13569 1480 aa18.24■□□□□ 0.51
AP000561.1-201ENST00000444130 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
AP000561.1-201ENST00000444130 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
AP000561.1-201ENST00000444130 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
AP000561.1-201ENST00000444130 WDR62O43379 1518 aa18.15■□□□□ 0.5
AP000561.1-201ENST00000444130 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
AP000561.1-201ENST00000444130 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
AP000561.1-201ENST00000444130 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
AP000561.1-201ENST00000444130 URB2Q14146 1524 aaKnown RBP17.96■□□□□ 0.47
AP000561.1-201ENST00000444130 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
AP000561.1-201ENST00000444130 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
AP000561.1-201ENST00000444130 TOPBP1Q92547 1522 aa17.83■□□□□ 0.45
AP000561.1-201ENST00000444130 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
AP000561.1-201ENST00000444130 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
AP000561.1-201ENST00000444130 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
AP000561.1-201ENST00000444130 TARBP1Q13395 1621 aaKnown RBP17.67■□□□□ 0.42
AP000561.1-201ENST00000444130 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
AP000561.1-201ENST00000444130 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
AP000561.1-201ENST00000444130 WDR97A6NE52 1622 aa17.65■□□□□ 0.42
AP000561.1-201ENST00000444130 CUX1P39880 1505 aa17.62■□□□□ 0.41
AP000561.1-201ENST00000444130 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
AP000561.1-201ENST00000444130 SOGA1O94964 1423 aa17.57■□□□□ 0.4
AP000561.1-201ENST00000444130 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
AP000561.1-201ENST00000444130 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
AP000561.1-201ENST00000444130 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.39
AP000561.1-201ENST00000444130 BIVM-ERCC5R4GMW8 1640 aa17.48■□□□□ 0.39
AP000561.1-201ENST00000444130 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
AP000561.1-201ENST00000444130 ABCA10Q8WWZ4 1543 aa17.46■□□□□ 0.39
AP000561.1-201ENST00000444130 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
AP000561.1-201ENST00000444130 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
AP000561.1-201ENST00000444130 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
AP000561.1-201ENST00000444130 CHD1O14646 1710 aa17.44■□□□□ 0.38
AP000561.1-201ENST00000444130 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
AP000561.1-201ENST00000444130 ABCA5Q8WWZ7 1642 aa17.41■□□□□ 0.38
AP000561.1-201ENST00000444130 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
AP000561.1-201ENST00000444130 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
AP000561.1-201ENST00000444130 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
AP000561.1-201ENST00000444130 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
AP000561.1-201ENST00000444130 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
AP000561.1-201ENST00000444130 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
AP000561.1-201ENST00000444130 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
AP000561.1-201ENST00000444130 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
AP000561.1-201ENST00000444130 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
AP000561.1-201ENST00000444130 FBLN2P98095 1184 aa17.3■□□□□ 0.36
AP000561.1-201ENST00000444130 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
AP000561.1-201ENST00000444130 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
AP000561.1-201ENST00000444130 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
AP000561.1-201ENST00000444130 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
AP000561.1-201ENST00000444130 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
AP000561.1-201ENST00000444130 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
AP000561.1-201ENST00000444130 FHAD1B1AJZ9 1412 aa17.21■□□□□ 0.34
AP000561.1-201ENST00000444130 NUP160Q12769 1436 aa17.15■□□□□ 0.34
AP000561.1-201ENST00000444130 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
AP000561.1-201ENST00000444130 KIF27Q86VH2 1401 aa17.13■□□□□ 0.33
AP000561.1-201ENST00000444130 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
AP000561.1-201ENST00000444130 CUL7Q14999 1698 aa17.1■□□□□ 0.33
AP000561.1-201ENST00000444130 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
AP000561.1-201ENST00000444130 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
AP000561.1-201ENST00000444130 IGF1RP08069 1367 aa17.02■□□□□ 0.31
AP000561.1-201ENST00000444130 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
AP000561.1-201ENST00000444130 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
AP000561.1-201ENST00000444130 ERCC6L2Q5T890 1561 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms