RNA–Protein interactions for RNA: ENST00000468888.6

CLASP2-209, Transcript of cytoplasmic linker associated protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLASP2, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-209ENST00000468888 NISCHQ9Y2I1 1504 aa19.29■□□□□ 0.68
CLASP2-209ENST00000468888 DCAF8L2P0C7V8 631 aa19.26■□□□□ 0.67
CLASP2-209ENST00000468888 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
CLASP2-209ENST00000468888 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
CLASP2-209ENST00000468888 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
CLASP2-209ENST00000468888 PELP1Q8IZL8 1130 aaKnown RBP17.69■□□□□ 0.42
CLASP2-209ENST00000468888 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
CLASP2-209ENST00000468888 APLP2Q06481 763 aa17.47■□□□□ 0.39
CLASP2-209ENST00000468888 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
CLASP2-209ENST00000468888 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
CLASP2-209ENST00000468888 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
CLASP2-209ENST00000468888 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
CLASP2-209ENST00000468888 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
CLASP2-209ENST00000468888 CCER1Q8TC90 406 aaPredicted RBP17.09■□□□□ 0.33
CLASP2-209ENST00000468888 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
CLASP2-209ENST00000468888 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
CLASP2-209ENST00000468888 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
CLASP2-209ENST00000468888 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
CLASP2-209ENST00000468888 HRCP23327 699 aa16.79■□□□□ 0.28
CLASP2-209ENST00000468888 MYT1Q01538 1121 aa16.78■□□□□ 0.28
CLASP2-209ENST00000468888 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
CLASP2-209ENST00000468888 NEFLP07196 543 aa16.72■□□□□ 0.27
CLASP2-209ENST00000468888 ATP1B4Q9UN42 357 aaPredicted RBP16.71■□□□□ 0.27
CLASP2-209ENST00000468888 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
CLASP2-209ENST00000468888 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
CLASP2-209ENST00000468888 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
CLASP2-209ENST00000468888 ABCC9O60706 1549 aa16.5■□□□□ 0.23
CLASP2-209ENST00000468888 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
CLASP2-209ENST00000468888 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
CLASP2-209ENST00000468888 ITGAEP38570 1179 aa16.3■□□□□ 0.2
CLASP2-209ENST00000468888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
CLASP2-209ENST00000468888 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
CLASP2-209ENST00000468888 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
CLASP2-209ENST00000468888 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
CLASP2-209ENST00000468888 ZCCHC6Q5VYS8 1495 aaKnown RBP15.99■□□□□ 0.15
CLASP2-209ENST00000468888 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
CLASP2-209ENST00000468888 GTF3C3Q9Y5Q9 886 aa15.97■□□□□ 0.15
CLASP2-209ENST00000468888 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
CLASP2-209ENST00000468888 RTL5Q5HYW3 569 aaPredicted RBP15.91■□□□□ 0.14
CLASP2-209ENST00000468888 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
CLASP2-209ENST00000468888 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
CLASP2-209ENST00000468888 ZNF316A6NFI3 1004 aaPredicted RBP15.85■□□□□ 0.13
CLASP2-209ENST00000468888 SCRIBQ14160 1630 aa15.83■□□□□ 0.12
CLASP2-209ENST00000468888 NEUROD1Q13562 356 aa15.83■□□□□ 0.12
CLASP2-209ENST00000468888 BCANQ96GW7 911 aa15.82■□□□□ 0.12
CLASP2-209ENST00000468888 ACIN1Q9UKV3 1341 aaKnown RBP15.8■□□□□ 0.12
CLASP2-209ENST00000468888 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
CLASP2-209ENST00000468888 ANP32CO43423 234 aa15.78■□□□□ 0.12
CLASP2-209ENST00000468888 CLSPNQ9HAW4 1339 aa15.76■□□□□ 0.11
CLASP2-209ENST00000468888 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
CLASP2-209ENST00000468888 CDK11AQ9UQ88 783 aaPredicted RBP15.71■□□□□ 0.11
CLASP2-209ENST00000468888 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
CLASP2-209ENST00000468888 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
CLASP2-209ENST00000468888 FBLN2P98095 1184 aa15.63■□□□□ 0.09
CLASP2-209ENST00000468888 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
CLASP2-209ENST00000468888 P3H3Q8IVL6 736 aa15.54■□□□□ 0.08
CLASP2-209ENST00000468888 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
CLASP2-209ENST00000468888 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
CLASP2-209ENST00000468888 NACADO15069 1562 aa15.43■□□□□ 0.06
CLASP2-209ENST00000468888 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
CLASP2-209ENST00000468888 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
CLASP2-209ENST00000468888 FKBP8Q14318 412 aa15.42■□□□□ 0.06
CLASP2-209ENST00000468888 CANXP27824 592 aaKnown RBP15.4■□□□□ 0.06
CLASP2-209ENST00000468888 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
CLASP2-209ENST00000468888 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
CLASP2-209ENST00000468888 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
CLASP2-209ENST00000468888 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
CLASP2-209ENST00000468888 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
CLASP2-209ENST00000468888 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
CLASP2-209ENST00000468888 ZNF777Q9ULD5 760 aaPredicted RBP15.29■□□□□ 0.04
CLASP2-209ENST00000468888 NEFMP07197 916 aa15.26■□□□□ 0.03
CLASP2-209ENST00000468888 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
CLASP2-209ENST00000468888 MIER1Q8N108 512 aa15.23■□□□□ 0.03
CLASP2-209ENST00000468888 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
CLASP2-209ENST00000468888 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
CLASP2-209ENST00000468888 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
CLASP2-209ENST00000468888 EEA1Q15075 1411 aa15.17■□□□□ 0.02
CLASP2-209ENST00000468888 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.02
CLASP2-209ENST00000468888 CLIP1P30622 1438 aa15.16■□□□□ 0.02
CLASP2-209ENST00000468888 CCDC136Q96JN2 1154 aa15.15■□□□□ 0.02
CLASP2-209ENST00000468888 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
CLASP2-209ENST00000468888 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
CLASP2-209ENST00000468888 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
CLASP2-209ENST00000468888 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
CLASP2-209ENST00000468888 UPF2Q9HAU5 1272 aaKnown RBP15.11■□□□□ 0.01
CLASP2-209ENST00000468888 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
CLASP2-209ENST00000468888 TMC1Q8TDI8 760 aa15.11■□□□□ 0.01
CLASP2-209ENST00000468888 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
CLASP2-209ENST00000468888 GOLGA3Q08378 1498 aa15.08■□□□□ 0.01
CLASP2-209ENST00000468888 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
CLASP2-209ENST00000468888 ANP32BQ92688 251 aaKnown RBP15.08■□□□□ 0
CLASP2-209ENST00000468888 NPM1P06748 294 aaKnown RBP eCLIP15.08■□□□□ 0
CLASP2-209ENST00000468888 CEP162Q5TB80 1403 aa15.08■□□□□ 0
CLASP2-209ENST00000468888 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
CLASP2-209ENST00000468888 MTUS2Q5JR59 1369 aa15.07■□□□□ 0
CLASP2-209ENST00000468888 HSP90AA1P07900 732 aaKnown RBP15.06■□□□□ 0
CLASP2-209ENST00000468888 NBR1Q14596 966 aa15.06■□□□□ 0
CLASP2-209ENST00000468888 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.05■□□□□ 0
CLASP2-209ENST00000468888 KIF27Q86VH2 1401 aa15.03■□□□□ -0
CLASP2-209ENST00000468888 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms