Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC11.72□□□□□ -0.536e-8■■□□□ 12.6
NKRFO15226 PCK2-207ENST00000559171 508 ntTSL 315.62■□□□□ 0.093e-12■■□□□ 12.6
NKRFO15226 PCK2-209ENST00000559503 826 ntTSL 512.08□□□□□ -0.483e-12■■□□□ 12.6
NKRFO15226 SMAD2-208ENST00000587269 1042 ntTSL 334.38■■■■□ 3.095e-8■■□□□ 12.6
NKRFO15226 PEG3-203ENST00000594389 411 ntTSL 326.06■■□□□ 1.765e-7■■□□□ 12.6
NKRFO15226 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.355e-7■■□□□ 12.6
NKRFO15226 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.175e-7■■□□□ 12.6
NKRFO15226 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.155e-7■■□□□ 12.6
NKRFO15226 PEG3-204ENST00000594706 583 ntTSL 321.92■■□□□ 1.15e-7■■□□□ 12.6
NKRFO15226 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.09■□□□□ 0.335e-7■■□□□ 12.6
NKRFO15226 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)16.02■□□□□ 0.155e-7■■□□□ 12.6
NKRFO15226 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC13.11□□□□□ -0.315e-7■■□□□ 12.6
NKRFO15226 PEG3-205ENST00000596261 570 ntTSL 49.58□□□□□ -0.885e-7■■□□□ 12.6
NKRFO15226 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.925e-7■■□□□ 12.6
NKRFO15226 AC129492.6-201ENST00000611383 1305 ntBASIC19.35■□□□□ 0.699e-9■■□□□ 12.6
NKRFO15226 CYHR1-207ENST00000528558 907 ntTSL 225.55■■□□□ 1.684e-7■■□□□ 12.6
NKRFO15226 TJP1-210ENST00000558447 720 ntTSL 329.61■■■□□ 2.337e-7■■□□□ 12.6
NKRFO15226 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.68■■□□□ 1.067e-7■■□□□ 12.6
NKRFO15226 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.337e-7■■□□□ 12.6
NKRFO15226 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.237e-7■■□□□ 12.6
NKRFO15226 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.497e-7■■□□□ 12.6
NKRFO15226 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.597e-7■■□□□ 12.6
NKRFO15226 TJP1-206ENST00000473741 270 ntTSL 23.29□□□□□ -1.887e-7■■□□□ 12.6
NKRFO15226 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.34■■□□□ 1.657e-7■■□□□ 12.6
NKRFO15226 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.187e-7■■□□□ 12.6
NKRFO15226 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.127e-7■■□□□ 12.6
NKRFO15226 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.77■■□□□ 1.077e-7■■□□□ 12.6
NKRFO15226 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.41■■□□□ 1.027e-7■■□□□ 12.6
NKRFO15226 ACBD4-205ENST00000585553 2241 ntTSL 220.98■□□□□ 0.957e-7■■□□□ 12.6
NKRFO15226 NDRG1-225ENST00000522890 581 ntTSL 518.69■□□□□ 0.581e-6■■□□□ 12.5
NKRFO15226 NDRG1-210ENST00000518480 558 ntTSL 418.11■□□□□ 0.491e-6■■□□□ 12.5
NKRFO15226 NDRG1-211ENST00000519228 729 ntTSL 417.63■□□□□ 0.411e-6■■□□□ 12.5
NKRFO15226 NDRG1-214ENST00000520230 582 ntTSL 415.67■□□□□ 0.11e-6■■□□□ 12.5
NKRFO15226 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.65■□□□□ 0.11e-6■■□□□ 12.5
NKRFO15226 NDRG1-213ENST00000519580 550 ntTSL 515.2■□□□□ 0.021e-6■■□□□ 12.5
NKRFO15226 NDRG1-219ENST00000521544 709 ntTSL 515.2■□□□□ 0.021e-6■■□□□ 12.5
NKRFO15226 NDRG1-206ENST00000518010 581 ntTSL 415.12■□□□□ 0.011e-6■■□□□ 12.5
NKRFO15226 NDRG1-221ENST00000522377 1103 ntTSL 514.65□□□□□ -0.061e-6■■□□□ 12.5
NKRFO15226 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.39□□□□□ -0.111e-6■■□□□ 12.5
NKRFO15226 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC13.59□□□□□ -0.231e-6■■□□□ 12.5
NKRFO15226 NDRG1-224ENST00000522738 530 ntTSL 513.3□□□□□ -0.281e-6■■□□□ 12.5
NKRFO15226 NDRG1-215ENST00000520943 536 ntTSL 411.76□□□□□ -0.531e-6■■□□□ 12.5
NKRFO15226 NDRG1-227ENST00000523892 562 ntTSL 410.23□□□□□ -0.771e-6■■□□□ 12.5
NKRFO15226 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.351e-8■■□□□ 12.5
NKRFO15226 PTP4A1-202ENST00000470661 479 ntTSL 27.84□□□□□ -1.151e-8■■□□□ 12.5
NKRFO15226 LINC01089-203ENST00000535614 480 ntTSL 419.16■□□□□ 0.667e-8■■□□□ 12.5
NKRFO15226 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.8■□□□□ 0.67e-8■■□□□ 12.5
NKRFO15226 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC14.08□□□□□ -0.167e-8■■□□□ 12.5
NKRFO15226 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)12.96□□□□□ -0.337e-8■■□□□ 12.5
NKRFO15226 LINC01089-212ENST00000545885 559 ntTSL 211.14□□□□□ -0.637e-8■■□□□ 12.5
NKRFO15226 NSD2-218ENST00000508355 2092 ntTSL 1 (best)15.74■□□□□ 0.114e-7■■□□□ 12.5
NKRFO15226 NSD2-216ENST00000507820 528 ntTSL 514.82□□□□□ -0.044e-7■■□□□ 12.5
NKRFO15226 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.944e-7■■□□□ 12.5
NKRFO15226 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.93□□□□□ -0.984e-7■■□□□ 12.5
NKRFO15226 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.35■□□□□ 0.371e-6■■□□□ 12.5
NKRFO15226 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.32■□□□□ 0.361e-6■■□□□ 12.5
NKRFO15226 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.66■□□□□ 0.11e-6■■□□□ 12.5
NKRFO15226 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.34■□□□□ 0.051e-6■■□□□ 12.5
NKRFO15226 MTA1-205ENST00000426567 568 ntTSL 316.67■□□□□ 0.262e-8■■□□□ 12.5
NKRFO15226 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.53■■□□□ 1.681e-7■■□□□ 12.5
NKRFO15226 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.32■□□□□ 0.841e-7■■□□□ 12.5
NKRFO15226 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.58■□□□□ 0.562e-7■■□□□ 12.5
NKRFO15226 SERINC2-204ENST00000491976 2807 ntTSL 218.52■□□□□ 0.562e-7■■□□□ 12.5
NKRFO15226 FASN-207ENST00000635197 627 ntTSL 318.59■□□□□ 0.572e-11■■□□□ 12.5
NKRFO15226 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.162e-11■■□□□ 12.5
NKRFO15226 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.242e-11■■□□□ 12.5
NKRFO15226 ACSS3-208ENST00000616449 3833 nt13.97□□□□□ -0.173e-6■■□□□ 12.5
NKRFO15226 SPIRE2-209ENST00000566337 1369 ntTSL 526.13■■□□□ 1.778e-8■■□□□ 12.5
NKRFO15226 MGAT4A-205ENST00000460768 426 ntTSL 220.79■□□□□ 0.922e-8■■□□□ 12.5
NKRFO15226 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.122e-8■■□□□ 12.5
NKRFO15226 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.05■■■□□ 2.725e-7■■□□□ 12.5
NKRFO15226 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.895e-7■■□□□ 12.5
NKRFO15226 AGAP1-214ENST00000635100 2478 ntTSL 517.06■□□□□ 0.325e-7■■□□□ 12.5
NKRFO15226 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.225e-7■■□□□ 12.5
NKRFO15226 SLC2A4RG-203ENST00000474248 624 ntTSL 226.61■■□□□ 1.853e-7■■□□□ 12.5
NKRFO15226 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.13■■■□□ 2.414e-10■■□□□ 12.5
NKRFO15226 ELK4-204ENST00000616704 2535 ntTSL 227.97■■■□□ 2.074e-10■■□□□ 12.5
NKRFO15226 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.91■□□□□ 0.944e-10■■□□□ 12.5
NKRFO15226 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.59□□□□□ -0.074e-10■■□□□ 12.5
NKRFO15226 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.194e-10■■□□□ 12.5
NKRFO15226 EBLN3P-207ENST00000631093 636 ntTSL 38.3□□□□□ -1.084e-10■■□□□ 12.5
NKRFO15226 EBLN3P-201ENST00000625218 311 ntTSL 26.34□□□□□ -1.394e-10■■□□□ 12.5
NKRFO15226 EBLN3P-203ENST00000627197 579 ntTSL 24.57□□□□□ -1.684e-10■■□□□ 12.5
NKRFO15226 EBLN3P-206ENST00000630598 301 ntTSL 53.57□□□□□ -1.844e-10■■□□□ 12.5
NKRFO15226 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.391e-6■■□□□ 12.5
NKRFO15226 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.151e-6■■□□□ 12.5
NKRFO15226 KDM6B-204ENST00000571047 362 ntTSL 512.31□□□□□ -0.441e-6■■□□□ 12.5
NKRFO15226 ZNF787-201ENST00000586787 386 ntTSL 1 (best)21.42■■□□□ 1.024e-6■■□□□ 12.5
NKRFO15226 KLC1-211ENST00000538504 822 ntTSL 226.51■■□□□ 1.831e-6■■□□□ 12.5
NKRFO15226 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.31■■□□□ 1.641e-6■■□□□ 12.5
NKRFO15226 KLC1-226ENST00000557686 535 ntTSL 325.06■■□□□ 1.61e-6■■□□□ 12.5
NKRFO15226 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.44■■□□□ 1.181e-6■■□□□ 12.5
NKRFO15226 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.09■■□□□ 1.131e-6■■□□□ 12.5
NKRFO15226 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.44■□□□□ 0.861e-6■■□□□ 12.5
NKRFO15226 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.89■□□□□ 0.611e-6■■□□□ 12.5
NKRFO15226 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.46□□□□□ -1.061e-6■■□□□ 12.5
NKRFO15226 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.591e-7■■□□□ 12.5
NKRFO15226 GRAMD1A-212ENST00000600231 2534 ntTSL 224.14■■□□□ 1.451e-7■■□□□ 12.5
NKRFO15226 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.61e-7■■□□□ 12.5
NKRFO15226 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.73■□□□□ 0.591e-7■■□□□ 12.5
Retrieved 100 of 9,198 protein–RNA pairs in 105.5 ms