RNA–Protein interactions for RNA: ENST00000559171.1

PCK2-207, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 3

Gene PCK2, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-207ENST00000559171 NISCHQ9Y2I1 1504 aa33.29■■■□□ 2.92
PCK2-207ENST00000559171 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
PCK2-207ENST00000559171 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
PCK2-207ENST00000559171 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
PCK2-207ENST00000559171 ABCC9O60706 1549 aa29.17■■■□□ 2.26
PCK2-207ENST00000559171 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
PCK2-207ENST00000559171 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
PCK2-207ENST00000559171 NACADO15069 1562 aa27.85■■■□□ 2.05
PCK2-207ENST00000559171 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
PCK2-207ENST00000559171 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.02
PCK2-207ENST00000559171 DCAF1Q9Y4B6 1507 aa27.49■■□□□ 1.99
PCK2-207ENST00000559171 UNC13AQ9UPW8 1703 aa27.29■■□□□ 1.96
PCK2-207ENST00000559171 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
PCK2-207ENST00000559171 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
PCK2-207ENST00000559171 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
PCK2-207ENST00000559171 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
PCK2-207ENST00000559171 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
PCK2-207ENST00000559171 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
PCK2-207ENST00000559171 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
PCK2-207ENST00000559171 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
PCK2-207ENST00000559171 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
PCK2-207ENST00000559171 PHF23Q9BUL5 403 aaPredicted RBP26.08■■□□□ 1.77
PCK2-207ENST00000559171 SMARCA4P51532 1647 aa25.85■■□□□ 1.73
PCK2-207ENST00000559171 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
PCK2-207ENST00000559171 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
PCK2-207ENST00000559171 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
PCK2-207ENST00000559171 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
PCK2-207ENST00000559171 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
PCK2-207ENST00000559171 HMGXB3Q12766 1538 aa25.58■■□□□ 1.69
PCK2-207ENST00000559171 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
PCK2-207ENST00000559171 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
PCK2-207ENST00000559171 WIZO95785 1651 aa25.38■■□□□ 1.65
PCK2-207ENST00000559171 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
PCK2-207ENST00000559171 NESP48681 1621 aa25.23■■□□□ 1.63
PCK2-207ENST00000559171 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
PCK2-207ENST00000559171 TOP2AP11388 1531 aaKnown RBP25.08■■□□□ 1.61
PCK2-207ENST00000559171 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
PCK2-207ENST00000559171 CADPSQ9ULU8 1353 aa24.99■■□□□ 1.59
PCK2-207ENST00000559171 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
PCK2-207ENST00000559171 CUX2O14529 1486 aa24.86■■□□□ 1.57
PCK2-207ENST00000559171 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
PCK2-207ENST00000559171 THOC2Q8NI27 1593 aaKnown RBP24.83■■□□□ 1.57
PCK2-207ENST00000559171 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.56
PCK2-207ENST00000559171 CFTRP13569 1480 aa24.83■■□□□ 1.56
PCK2-207ENST00000559171 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
PCK2-207ENST00000559171 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
PCK2-207ENST00000559171 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
PCK2-207ENST00000559171 FOXD1Q16676 465 aa24.64■■□□□ 1.54
PCK2-207ENST00000559171 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
PCK2-207ENST00000559171 WDR62O43379 1518 aa24.6■■□□□ 1.53
PCK2-207ENST00000559171 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
PCK2-207ENST00000559171 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
PCK2-207ENST00000559171 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
PCK2-207ENST00000559171 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
PCK2-207ENST00000559171 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
PCK2-207ENST00000559171 ABCC8Q09428 1581 aa24.2■■□□□ 1.47
PCK2-207ENST00000559171 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
PCK2-207ENST00000559171 ZNF608Q9ULD9 1512 aaPredicted RBP24.14■■□□□ 1.45
PCK2-207ENST00000559171 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
PCK2-207ENST00000559171 CUX1P39880 1505 aa24.1■■□□□ 1.45
PCK2-207ENST00000559171 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
PCK2-207ENST00000559171 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
PCK2-207ENST00000559171 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
PCK2-207ENST00000559171 SOGA1O94964 1423 aa23.98■■□□□ 1.43
PCK2-207ENST00000559171 EIF4G3O43432 1585 aaKnown RBP23.97■■□□□ 1.43
PCK2-207ENST00000559171 AQRO60306 1485 aaKnown RBP eCLIP23.97■■□□□ 1.431e-8■■□□□ 13.5
PCK2-207ENST00000559171 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
PCK2-207ENST00000559171 WRNQ14191 1432 aaPredicted RBP eCLIP23.86■■□□□ 1.41
PCK2-207ENST00000559171 SYNJ1O43426 1573 aa23.85■■□□□ 1.41
PCK2-207ENST00000559171 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
PCK2-207ENST00000559171 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
PCK2-207ENST00000559171 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
PCK2-207ENST00000559171 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
PCK2-207ENST00000559171 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
PCK2-207ENST00000559171 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
PCK2-207ENST00000559171 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
PCK2-207ENST00000559171 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
PCK2-207ENST00000559171 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
PCK2-207ENST00000559171 FBLN2P98095 1184 aa23.66■■□□□ 1.38
PCK2-207ENST00000559171 CHD1O14646 1710 aa23.66■■□□□ 1.38
PCK2-207ENST00000559171 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
PCK2-207ENST00000559171 PBRM1Q86U86 1689 aa23.61■■□□□ 1.37
PCK2-207ENST00000559171 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
PCK2-207ENST00000559171 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
PCK2-207ENST00000559171 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
PCK2-207ENST00000559171 ADAMTS12P58397 1594 aa23.47■■□□□ 1.35
PCK2-207ENST00000559171 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
PCK2-207ENST00000559171 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
PCK2-207ENST00000559171 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
PCK2-207ENST00000559171 ARHGEF11O15085 1522 aa23.46■■□□□ 1.35
PCK2-207ENST00000559171 TRIM41Q8WV44 630 aa23.46■■□□□ 1.35
PCK2-207ENST00000559171 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
PCK2-207ENST00000559171 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
PCK2-207ENST00000559171 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
PCK2-207ENST00000559171 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
PCK2-207ENST00000559171 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
PCK2-207ENST00000559171 IGF1RP08069 1367 aa23.33■■□□□ 1.33
PCK2-207ENST00000559171 NUP160Q12769 1436 aa23.33■■□□□ 1.32
PCK2-207ENST00000559171 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
PCK2-207ENST00000559171 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms