Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.39□□□□□ -0.918e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.938e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.17□□□□□ -0.948e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.03□□□□□ -0.968e-7■■■■□ 21.9
BCCIPQ9P287 CMSS1-206ENST00000491299 881 ntTSL 58.94□□□□□ -0.981e-6■■■■□ 21.9
BCCIPQ9P287 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.87□□□□□ -0.998e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-214ENST00000525843 4528 ntTSL 58.5□□□□□ -1.058e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-223ENST00000532678 793 ntTSL 48.35□□□□□ -1.078e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-207ENST00000417294 4251 ntTSL 58.19□□□□□ -1.18e-7■■■■□ 21.9
BCCIPQ9P287 DHRSX-204ENST00000441131 539 ntTSL 27.92□□□□□ -1.148e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-218ENST00000526215 586 ntTSL 27.39□□□□□ -1.238e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-211ENST00000498419 3068 ntTSL 57.23□□□□□ -1.258e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.278e-7■■■■□ 21.9
BCCIPQ9P287 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.98□□□□□ -1.298e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.69□□□□□ -1.348e-7■■■■□ 21.9
BCCIPQ9P287 ZHX2-202ENST00000534247 873 ntTSL 34.57□□□□□ -1.688e-7■■■■□ 21.9
BCCIPQ9P287 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.14■□□□□ 0.659e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.19e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.029e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.349e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-206ENST00000431914 634 ntTSL 411.82□□□□□ -0.529e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.659e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-207ENST00000433400 596 ntTSL 46.36□□□□□ -1.399e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-205ENST00000426215 563 ntTSL 45.82□□□□□ -1.489e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-209ENST00000450969 645 ntTSL 44.32□□□□□ -1.729e-7■■■■□ 21.8
BCCIPQ9P287 RPS4Y1-202ENST00000430575 811 ntTSL 36.13□□□□□ -1.437e-8■■■■□ 21.4
BCCIPQ9P287 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.727e-8■■■■□ 21.4
BCCIPQ9P287 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC13.94□□□□□ -0.186e-7■■■■□ 21.4
BCCIPQ9P287 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.545e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.215e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.015e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.215e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-208ENST00000438473 1085 ntTSL 55.34□□□□□ -1.555e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-206ENST00000420525 538 ntTSL 32.44□□□□□ -2.025e-7■■■■□ 21.3
BCCIPQ9P287 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.491e-6■■■■□ 21.2
BCCIPQ9P287 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.471e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-207ENST00000595773 546 ntTSL 517.08■□□□□ 0.321e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-209ENST00000599972 498 ntTSL 215.7■□□□□ 0.11e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.521e-6■■■■□ 21.2
BCCIPQ9P287 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.541e-6■■■■□ 21.2
BCCIPQ9P287 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.561e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-235ENST00000533189 498 ntTSL 311.49□□□□□ -0.571e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC11.18□□□□□ -0.621e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC10.96□□□□□ -0.651e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.751e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.751e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.771e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.771e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC10.17□□□□□ -0.781e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.03□□□□□ -0.81e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.99□□□□□ -0.811e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.94□□□□□ -0.821e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.91□□□□□ -0.821e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.91□□□□□ -0.821e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.71□□□□□ -0.861e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.71□□□□□ -0.861e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.58□□□□□ -0.881e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.57□□□□□ -0.881e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.57□□□□□ -0.881e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.41□□□□□ -0.91e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.41□□□□□ -0.91e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC9.4□□□□□ -0.91e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.39□□□□□ -0.911e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.21□□□□□ -0.931e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.06□□□□□ -0.961e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.94□□□□□ -0.981e-6■■■■□ 21.2
BCCIPQ9P287 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC8.91□□□□□ -0.981e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.81□□□□□ -11e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.81□□□□□ -11e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.76□□□□□ -1.011e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.72□□□□□ -1.011e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.35□□□□□ -1.071e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.111e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.95□□□□□ -1.141e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.41e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-208ENST00000599368 665 ntTSL 25.81□□□□□ -1.481e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-211ENST00000601715 446 ntTSL 25.79□□□□□ -1.481e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-210ENST00000601688 467 ntTSL 1 (best)3.96□□□□□ -1.781e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-209ENST00000524579 505 ntTSL 43.87□□□□□ -1.791e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.111e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-221ENST00000459656 1901 ntTSL 1 (best)21.13■□□□□ 0.971e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-225ENST00000471533 329 ntTSL 320.49■□□□□ 0.871e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.841e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-216ENST00000444012 605 ntTSL 419.59■□□□□ 0.731e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-220ENST00000457757 835 ntTSL 519.06■□□□□ 0.641e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-212ENST00000428692 541 ntTSL 419.06■□□□□ 0.641e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-211ENST00000423749 771 ntTSL 518.68■□□□□ 0.581e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.71■□□□□ 0.431e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.171e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-226ENST00000471601 1730 ntTSL 214.75□□□□□ -0.051e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-214ENST00000439084 584 ntTSL 314.51□□□□□ -0.091e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.31e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC11.54□□□□□ -0.561e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-219ENST00000453663 637 ntTSL 410.82□□□□□ -0.681e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC9.52□□□□□ -0.891e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.891e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-207ENST00000409397 920 ntTSL 39.23□□□□□ -0.931e-6■■■■□ 21.2
Retrieved 100 of 1,347 protein–RNA pairs in 28.4 ms