Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.39□□□□□ -0.918e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.938e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.17□□□□□ -0.948e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.03□□□□□ -0.968e-7■■■■□ 21.9
BCCIPQ9P287 CMSS1-206ENST00000491299 881 ntTSL 58.94□□□□□ -0.981e-6■■■■□ 21.9
BCCIPQ9P287 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.87□□□□□ -0.998e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-214ENST00000525843 4528 ntTSL 58.5□□□□□ -1.058e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-223ENST00000532678 793 ntTSL 48.35□□□□□ -1.078e-7■■■■□ 21.9
BCCIPQ9P287 MAP4K4-207ENST00000417294 4251 ntTSL 58.19□□□□□ -1.18e-7■■■■□ 21.9
BCCIPQ9P287 DHRSX-204ENST00000441131 539 ntTSL 27.92□□□□□ -1.148e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-218ENST00000526215 586 ntTSL 27.39□□□□□ -1.238e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-211ENST00000498419 3068 ntTSL 57.23□□□□□ -1.258e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.278e-7■■■■□ 21.9
BCCIPQ9P287 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.98□□□□□ -1.298e-7■■■■□ 21.9
BCCIPQ9P287 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.69□□□□□ -1.348e-7■■■■□ 21.9
BCCIPQ9P287 ZHX2-202ENST00000534247 873 ntTSL 34.57□□□□□ -1.688e-7■■■■□ 21.9
BCCIPQ9P287 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.14■□□□□ 0.659e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.19e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.029e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.349e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-206ENST00000431914 634 ntTSL 411.82□□□□□ -0.529e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.659e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-207ENST00000433400 596 ntTSL 46.36□□□□□ -1.399e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-205ENST00000426215 563 ntTSL 45.82□□□□□ -1.489e-7■■■■□ 21.8
BCCIPQ9P287 CTNNB1-209ENST00000450969 645 ntTSL 44.32□□□□□ -1.729e-7■■■■□ 21.8
BCCIPQ9P287 RPS4Y1-202ENST00000430575 811 ntTSL 36.13□□□□□ -1.437e-8■■■■□ 21.4
BCCIPQ9P287 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.727e-8■■■■□ 21.4
BCCIPQ9P287 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC13.94□□□□□ -0.186e-7■■■■□ 21.4
BCCIPQ9P287 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.545e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.215e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.015e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.215e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-208ENST00000438473 1085 ntTSL 55.34□□□□□ -1.555e-7■■■■□ 21.3
BCCIPQ9P287 MLLT10-206ENST00000420525 538 ntTSL 32.44□□□□□ -2.025e-7■■■■□ 21.3
BCCIPQ9P287 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.491e-6■■■■□ 21.2
BCCIPQ9P287 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.471e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-207ENST00000595773 546 ntTSL 517.08■□□□□ 0.321e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-209ENST00000599972 498 ntTSL 215.7■□□□□ 0.11e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.521e-6■■■■□ 21.2
BCCIPQ9P287 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.541e-6■■■■□ 21.2
BCCIPQ9P287 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.561e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-235ENST00000533189 498 ntTSL 311.49□□□□□ -0.571e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC11.18□□□□□ -0.621e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC10.96□□□□□ -0.651e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.751e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.751e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.771e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.771e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC10.17□□□□□ -0.781e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.03□□□□□ -0.81e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.99□□□□□ -0.811e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.94□□□□□ -0.821e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.91□□□□□ -0.821e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC9.91□□□□□ -0.821e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.71□□□□□ -0.861e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC9.71□□□□□ -0.861e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.58□□□□□ -0.881e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.57□□□□□ -0.881e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.57□□□□□ -0.881e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.41□□□□□ -0.91e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.41□□□□□ -0.91e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC9.4□□□□□ -0.91e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.39□□□□□ -0.911e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.21□□□□□ -0.931e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.06□□□□□ -0.961e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.94□□□□□ -0.981e-6■■■■□ 21.2
BCCIPQ9P287 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC8.91□□□□□ -0.981e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.81□□□□□ -11e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.81□□□□□ -11e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.76□□□□□ -1.011e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.72□□□□□ -1.011e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.35□□□□□ -1.071e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.111e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.95□□□□□ -1.141e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.41e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-208ENST00000599368 665 ntTSL 25.81□□□□□ -1.481e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-211ENST00000601715 446 ntTSL 25.79□□□□□ -1.481e-6■■■■□ 21.2
BCCIPQ9P287 ZNF780A-210ENST00000601688 467 ntTSL 1 (best)3.96□□□□□ -1.781e-6■■■■□ 21.2
BCCIPQ9P287 CTNND1-209ENST00000524579 505 ntTSL 43.87□□□□□ -1.791e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.111e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-221ENST00000459656 1901 ntTSL 1 (best)21.13■□□□□ 0.971e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-225ENST00000471533 329 ntTSL 320.49■□□□□ 0.871e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.841e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-216ENST00000444012 605 ntTSL 419.59■□□□□ 0.731e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-220ENST00000457757 835 ntTSL 519.06■□□□□ 0.641e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-212ENST00000428692 541 ntTSL 419.06■□□□□ 0.641e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-211ENST00000423749 771 ntTSL 518.68■□□□□ 0.581e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.71■□□□□ 0.431e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.171e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-226ENST00000471601 1730 ntTSL 214.75□□□□□ -0.051e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-214ENST00000439084 584 ntTSL 314.51□□□□□ -0.091e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.31e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC11.54□□□□□ -0.561e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-219ENST00000453663 637 ntTSL 410.82□□□□□ -0.681e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC9.52□□□□□ -0.891e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.891e-6■■■■□ 21.2
BCCIPQ9P287 SPATS2L-207ENST00000409397 920 ntTSL 39.23□□□□□ -0.931e-6■■■■□ 21.2
Retrieved 100 of 1,347 protein–RNA pairs in 105.7 ms