RNA–Protein interactions for RNA: ENST00000526215.5

PUM1-218, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-218ENST00000526215 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
PUM1-218ENST00000526215 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
PUM1-218ENST00000526215 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
PUM1-218ENST00000526215 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
PUM1-218ENST00000526215 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
PUM1-218ENST00000526215 FOXD1Q16676 465 aa18.4■□□□□ 0.54
PUM1-218ENST00000526215 ADRA2BP18089 450 aa17.64■□□□□ 0.41
PUM1-218ENST00000526215 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.41
PUM1-218ENST00000526215 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
PUM1-218ENST00000526215 MSH5O43196 834 aa17.09■□□□□ 0.33
PUM1-218ENST00000526215 NISCHQ9Y2I1 1504 aa16.36■□□□□ 0.21
PUM1-218ENST00000526215 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
PUM1-218ENST00000526215 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
PUM1-218ENST00000526215 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
PUM1-218ENST00000526215 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
PUM1-218ENST00000526215 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
PUM1-218ENST00000526215 KCNA4P22459 653 aa15.86■□□□□ 0.13
PUM1-218ENST00000526215 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
PUM1-218ENST00000526215 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
PUM1-218ENST00000526215 RNF216Q9NWF9 866 aaPredicted RBP15.6■□□□□ 0.09
PUM1-218ENST00000526215 HOXD11P31277 338 aaPredicted RBP15.52■□□□□ 0.08
PUM1-218ENST00000526215 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
PUM1-218ENST00000526215 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
PUM1-218ENST00000526215 DNAJC5Q9H3Z4 198 aa15.31■□□□□ 0.04
PUM1-218ENST00000526215 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
PUM1-218ENST00000526215 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
PUM1-218ENST00000526215 ABCC9O60706 1549 aa15.14■□□□□ 0.01
PUM1-218ENST00000526215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■□□□□ 8.7
PUM1-218ENST00000526215 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
PUM1-218ENST00000526215 CCDC180Q9P1Z9 1646 aa14.73□□□□□ -0.05
PUM1-218ENST00000526215 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
PUM1-218ENST00000526215 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
PUM1-218ENST00000526215 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
PUM1-218ENST00000526215 ZBTB22O15209 634 aa14.54□□□□□ -0.08
PUM1-218ENST00000526215 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
PUM1-218ENST00000526215 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
PUM1-218ENST00000526215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
PUM1-218ENST00000526215 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
PUM1-218ENST00000526215 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
PUM1-218ENST00000526215 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
PUM1-218ENST00000526215 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
PUM1-218ENST00000526215 APLP2Q06481 763 aa14.35□□□□□ -0.11
PUM1-218ENST00000526215 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
PUM1-218ENST00000526215 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
PUM1-218ENST00000526215 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
PUM1-218ENST00000526215 CAPN15O75808 1086 aa14.11□□□□□ -0.15
PUM1-218ENST00000526215 SPINK5Q9NQ38 1064 aaPredicted RBP14.09□□□□□ -0.15
PUM1-218ENST00000526215 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
PUM1-218ENST00000526215 NACADO15069 1562 aa14.05□□□□□ -0.16
PUM1-218ENST00000526215 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
PUM1-218ENST00000526215 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
PUM1-218ENST00000526215 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
PUM1-218ENST00000526215 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
PUM1-218ENST00000526215 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
PUM1-218ENST00000526215 DSG3P32926 999 aa13.85□□□□□ -0.19
PUM1-218ENST00000526215 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
PUM1-218ENST00000526215 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
PUM1-218ENST00000526215 POLA2Q14181 598 aa13.79□□□□□ -0.2
PUM1-218ENST00000526215 ABCB7O75027 752 aa13.78□□□□□ -0.2
PUM1-218ENST00000526215 BICRAQ9NZM4 1560 aa13.76□□□□□ -0.21
PUM1-218ENST00000526215 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
PUM1-218ENST00000526215 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
PUM1-218ENST00000526215 CUX2O14529 1486 aa13.66□□□□□ -0.22
PUM1-218ENST00000526215 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
PUM1-218ENST00000526215 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
PUM1-218ENST00000526215 FBLN2P98095 1184 aa13.57□□□□□ -0.24
PUM1-218ENST00000526215 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
PUM1-218ENST00000526215 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
PUM1-218ENST00000526215 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
PUM1-218ENST00000526215 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
PUM1-218ENST00000526215 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
PUM1-218ENST00000526215 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
PUM1-218ENST00000526215 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
PUM1-218ENST00000526215 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
PUM1-218ENST00000526215 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
PUM1-218ENST00000526215 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
PUM1-218ENST00000526215 SPDYE2Q495Y8 402 aa13.24□□□□□ -0.29
PUM1-218ENST00000526215 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
PUM1-218ENST00000526215 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
PUM1-218ENST00000526215 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
PUM1-218ENST00000526215 FKBP8Q14318 412 aa13.12□□□□□ -0.31
PUM1-218ENST00000526215 AKT1S1Q96B36 256 aa13.09□□□□□ -0.31
PUM1-218ENST00000526215 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
PUM1-218ENST00000526215 NCAPD3P42695 1498 aa13.02□□□□□ -0.33
PUM1-218ENST00000526215 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
PUM1-218ENST00000526215 PROM2Q8N271 834 aa12.92□□□□□ -0.34
PUM1-218ENST00000526215 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
PUM1-218ENST00000526215 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
PUM1-218ENST00000526215 SMARCA2P51531 1590 aa12.85□□□□□ -0.35
PUM1-218ENST00000526215 STAG3Q9UJ98 1225 aa12.84□□□□□ -0.35
PUM1-218ENST00000526215 NESP48681 1621 aa12.83□□□□□ -0.36
PUM1-218ENST00000526215 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
PUM1-218ENST00000526215 RIMBP3CA6NJZ7 1639 aa12.79□□□□□ -0.36
PUM1-218ENST00000526215 RIMBP3BA6NNM3 1639 aa12.79□□□□□ -0.36
PUM1-218ENST00000526215 RIMBP3Q9UFD9 1639 aa12.79□□□□□ -0.36
PUM1-218ENST00000526215 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
PUM1-218ENST00000526215 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
PUM1-218ENST00000526215 SMARCA4P51532 1647 aa12.77□□□□□ -0.37
PUM1-218ENST00000526215 THOC2Q8NI27 1593 aaKnown RBP12.76□□□□□ -0.37
PUM1-218ENST00000526215 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms