Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.051e-6■■■■□ 26.6
XRN2Q9H0D6 ULK1-206ENST00000542313 307 ntTSL 314.54□□□□□ -0.081e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-202ENST00000544417 933 ntTSL 5 BASIC13.96□□□□□ -0.171e-6■■■■□ 26.6
XRN2Q9H0D6 KMT5C-209ENST00000587442 464 ntTSL 313.91□□□□□ -0.181e-6■■■■□ 26.6
XRN2Q9H0D6 CIZ1-202ENST00000324544 809 ntTSL 313.74□□□□□ -0.211e-6■■■■□ 26.6
XRN2Q9H0D6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.253e-12■■■■□ 26.6
XRN2Q9H0D6 MDM2-204ENST00000311420 1583 ntTSL 513.14□□□□□ -0.311e-6■■■■□ 26.6
XRN2Q9H0D6 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.431e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.461e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-212ENST00000561424 604 ntTSL 311.5□□□□□ -0.571e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-206ENST00000559720 1220 ntTSL 511.5□□□□□ -0.571e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-203ENST00000557901 407 ntTSL 1 (best)9.62□□□□□ -0.871e-6■■■■□ 26.6
XRN2Q9H0D6 CBX1-203ENST00000402583 578 ntTSL 49.48□□□□□ -0.892e-6■■■■□ 26.6
XRN2Q9H0D6 MDM2-213ENST00000393417 1683 ntTSL 59.29□□□□□ -0.921e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-204ENST00000558401 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.931e-6■■■■□ 26.6
XRN2Q9H0D6 CHD6-209ENST00000482596 599 ntTSL 1 (best)8.9□□□□□ -0.982e-9■■■■□ 26.6
XRN2Q9H0D6 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.081e-6■■■■□ 26.6
XRN2Q9H0D6 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.26□□□□□ -1.093e-9■■■■□ 26.6
XRN2Q9H0D6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.79□□□□□ -1.162e-6■■■■□ 26.6
XRN2Q9H0D6 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.293e-9■■■■□ 26.6
XRN2Q9H0D6 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.321e-6■■■■□ 26.6
XRN2Q9H0D6 B2M-201ENST00000349264 732 ntTSL 36.78□□□□□ -1.321e-6■■■■□ 26.6
XRN2Q9H0D6 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.372e-9■■■■□ 26.6
XRN2Q9H0D6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.41e-6■■■■□ 26.6
XRN2Q9H0D6 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.24□□□□□ -1.412e-9■■■■□ 26.6
XRN2Q9H0D6 SKP1-213ENST00000524288 732 ntTSL 1 (best)6.23□□□□□ -1.413e-12■■■■□ 26.6
XRN2Q9H0D6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.451e-6■■■■□ 26.6
XRN2Q9H0D6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.461e-6■■■■□ 26.6
XRN2Q9H0D6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.513e-12■■■■□ 26.6
XRN2Q9H0D6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.653e-12■■■■□ 26.6
XRN2Q9H0D6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.663e-12■■■■□ 26.6
XRN2Q9H0D6 SKP1-212ENST00000523966 899 ntTSL 34.28□□□□□ -1.723e-12■■■■□ 26.6
XRN2Q9H0D6 SKP1-201ENST00000328392 572 ntTSL 54.25□□□□□ -1.733e-12■■■■□ 26.6
XRN2Q9H0D6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.753e-12■■■■□ 26.6
XRN2Q9H0D6 SKP1-205ENST00000519054 654 ntTSL 34.05□□□□□ -1.763e-12■■■■□ 26.6
XRN2Q9H0D6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.32□□□□□ -1.883e-12■■■■□ 26.6
XRN2Q9H0D6 ZNF101-201ENST00000318110 1830 ntTSL 517.28■□□□□ 0.362e-6■■■■□ 26.6
XRN2Q9H0D6 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC14.78□□□□□ -0.042e-6■■■■□ 26.6
XRN2Q9H0D6 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC13.41□□□□□ -0.262e-6■■■■□ 26.6
XRN2Q9H0D6 ZNF101-205ENST00000541458 575 ntTSL 411.13□□□□□ -0.632e-6■■■■□ 26.6
XRN2Q9H0D6 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.172e-6■■■■□ 26.6
XRN2Q9H0D6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.022e-13■■■■□ 26.6
XRN2Q9H0D6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.062e-13■■■■□ 26.6
XRN2Q9H0D6 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.09■□□□□ 0.173e-6■■■■□ 26.6
XRN2Q9H0D6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.72■□□□□ 0.591e-7■■■■□ 26.6
XRN2Q9H0D6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.934e-6■■■■□ 26.5
XRN2Q9H0D6 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.314e-6■■■■□ 26.5
XRN2Q9H0D6 C7orf50-207ENST00000488073 853 ntTSL 521.73■■□□□ 1.074e-6■■■■□ 26.5
XRN2Q9H0D6 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)30.65■■■□□ 2.55e-7■■■■□ 26.5
XRN2Q9H0D6 DYRK1A-209ENST00000608928 483 ntTSL 526.15■■□□□ 1.785e-7■■■■□ 26.5
XRN2Q9H0D6 FAM114A1-203ENST00000510213 567 ntTSL 227.62■■■□□ 2.015e-7■■■■□ 26.5
XRN2Q9H0D6 FAM114A1-206ENST00000515037 1431 ntTSL 2 BASIC12.59□□□□□ -0.395e-7■■■■□ 26.5
XRN2Q9H0D6 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.095e-7■■■■□ 26.5
XRN2Q9H0D6 PRKCZ-204ENST00000461106 1916 ntTSL 218.45■□□□□ 0.544e-6■■■■□ 26.5
XRN2Q9H0D6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.85■□□□□ 0.294e-6■■■■□ 26.5
XRN2Q9H0D6 SGTA-203ENST00000587866 841 ntTSL 521■□□□□ 0.955e-6■■■■□ 26.4
XRN2Q9H0D6 SGTA-204ENST00000589251 637 ntTSL 316.8■□□□□ 0.285e-6■■■■□ 26.4
XRN2Q9H0D6 PLXNB2-206ENST00000434732 253 ntTSL 215.31■□□□□ 0.042e-7■■■■□ 26.4
XRN2Q9H0D6 AKAP8-205ENST00000599883 860 ntTSL 521.8■■□□□ 1.085e-7■■■■□ 26.4
XRN2Q9H0D6 CTTN-204ENST00000393747 1315 ntTSL 521.72■■□□□ 1.073e-6■■■■□ 26.4
XRN2Q9H0D6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.973e-12■■■■□ 26.4
XRN2Q9H0D6 AKAP8-202ENST00000537303 1350 ntTSL 219.95■□□□□ 0.795e-7■■■■□ 26.4
XRN2Q9H0D6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.74■□□□□ 0.433e-12■■■■□ 26.4
XRN2Q9H0D6 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.13■□□□□ 0.333e-12■■■■□ 26.4
XRN2Q9H0D6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.261e-6■■■■□ 26.4
XRN2Q9H0D6 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.565e-7■■■■□ 26.4
XRN2Q9H0D6 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.591e-6■■■■□ 26.4
XRN2Q9H0D6 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC10.74□□□□□ -0.691e-6■■■■□ 26.4
XRN2Q9H0D6 MAFG-203ENST00000574686 570 ntTSL 526.72■■□□□ 1.873e-7■■■■□ 26.4
XRN2Q9H0D6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.653e-7■■■■□ 26.4
XRN2Q9H0D6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.16e-8■■■■□ 26.4
XRN2Q9H0D6 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)15.44■□□□□ 0.061e-10■■■■□ 26.4
XRN2Q9H0D6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.875e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.575e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-209ENST00000495212 744 ntTSL 324.03■■□□□ 1.445e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-205ENST00000469145 844 ntTSL 222.09■■□□□ 1.135e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-204ENST00000465180 2060 ntTSL 1 (best)16.95■□□□□ 0.35e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-202ENST00000368206 960 ntTSL 5 BASIC15.69■□□□□ 0.15e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC14.15□□□□□ -0.155e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-206ENST00000471377 592 ntTSL 310.61□□□□□ -0.715e-8■■■■□ 26.3
XRN2Q9H0D6 HDGF-208ENST00000482651 966 ntTSL 310.38□□□□□ -0.755e-8■■■■□ 26.3
XRN2Q9H0D6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.216e-10■■■■□ 26.3
XRN2Q9H0D6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.32■□□□□ 0.26e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.55■■□□□ 1.22e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-201ENST00000371982 553 ntTSL 318.27■□□□□ 0.522e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.26■□□□□ 0.192e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.16■□□□□ 0.182e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.64■□□□□ 0.092e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-205ENST00000467910 693 ntTSL 515.63■□□□□ 0.092e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.092e-10■■■■□ 26.3
XRN2Q9H0D6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.52■□□□□ 0.082e-10■■■■□ 26.3
XRN2Q9H0D6 BRD4-208ENST00000597315 892 ntTSL 531.71■■■□□ 2.671e-7■■■■□ 26.3
XRN2Q9H0D6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.03■□□□□ 0.483e-7■■■■□ 26.3
XRN2Q9H0D6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.021e-6■■■■□ 26.3
XRN2Q9H0D6 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.141e-6■■■■□ 26.3
XRN2Q9H0D6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.952e-7■■■■□ 26.2
XRN2Q9H0D6 AMN-202ENST00000541086 2269 ntTSL 223.08■■□□□ 1.292e-7■■■■□ 26.2
XRN2Q9H0D6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.38■■□□□ 1.171e-6■■■■□ 26.2
XRN2Q9H0D6 ABCC3-216ENST00000515585 484 ntTSL 314.96□□□□□ -0.014e-12■■■■□ 26.2
XRN2Q9H0D6 MAD1L1-210ENST00000444373 535 ntTSL 417.8■□□□□ 0.443e-7■■■■□ 26.2
Retrieved 100 of 21,068 protein–RNA pairs in 147.1 ms