RNA–Protein interactions for RNA: ENST00000471377.5

HDGF-206, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-206ENST00000471377 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
HDGF-206ENST00000471377 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
HDGF-206ENST00000471377 ABCC9O60706 1549 aa19.11■□□□□ 0.65
HDGF-206ENST00000471377 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
HDGF-206ENST00000471377 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
HDGF-206ENST00000471377 NACADO15069 1562 aa18.39■□□□□ 0.53
HDGF-206ENST00000471377 ZCCHC6Q5VYS8 1495 aaKnown RBP18.32■□□□□ 0.52
HDGF-206ENST00000471377 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
HDGF-206ENST00000471377 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
HDGF-206ENST00000471377 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
HDGF-206ENST00000471377 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
HDGF-206ENST00000471377 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
HDGF-206ENST00000471377 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
HDGF-206ENST00000471377 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
HDGF-206ENST00000471377 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
HDGF-206ENST00000471377 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
HDGF-206ENST00000471377 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
HDGF-206ENST00000471377 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
HDGF-206ENST00000471377 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
HDGF-206ENST00000471377 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
HDGF-206ENST00000471377 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
HDGF-206ENST00000471377 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
HDGF-206ENST00000471377 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
HDGF-206ENST00000471377 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
HDGF-206ENST00000471377 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
HDGF-206ENST00000471377 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
HDGF-206ENST00000471377 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
HDGF-206ENST00000471377 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
HDGF-206ENST00000471377 WIZO95785 1651 aa16.72■□□□□ 0.27
HDGF-206ENST00000471377 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
HDGF-206ENST00000471377 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
HDGF-206ENST00000471377 LAMC3Q9Y6N6 1575 aa16.52■□□□□ 0.24
HDGF-206ENST00000471377 NESP48681 1621 aa16.51■□□□□ 0.23
HDGF-206ENST00000471377 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
HDGF-206ENST00000471377 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
HDGF-206ENST00000471377 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
HDGF-206ENST00000471377 CFTRP13569 1480 aa16.37■□□□□ 0.21
HDGF-206ENST00000471377 SUPT5HO00267 1087 aaKnown RBP16.35■□□□□ 0.21
HDGF-206ENST00000471377 CUX2O14529 1486 aa16.34■□□□□ 0.21
HDGF-206ENST00000471377 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
HDGF-206ENST00000471377 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
HDGF-206ENST00000471377 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
HDGF-206ENST00000471377 THOC2Q8NI27 1593 aaKnown RBP16.26■□□□□ 0.19
HDGF-206ENST00000471377 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
HDGF-206ENST00000471377 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
HDGF-206ENST00000471377 WDR62O43379 1518 aa16.18■□□□□ 0.18
HDGF-206ENST00000471377 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
HDGF-206ENST00000471377 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
HDGF-206ENST00000471377 TOPBP1Q92547 1522 aa16.01■□□□□ 0.15
HDGF-206ENST00000471377 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
HDGF-206ENST00000471377 IFT140Q96RY7 1462 aa15.94■□□□□ 0.14
HDGF-206ENST00000471377 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
HDGF-206ENST00000471377 CUX1P39880 1505 aa15.88■□□□□ 0.13
HDGF-206ENST00000471377 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
HDGF-206ENST00000471377 SOGA1O94964 1423 aa15.84■□□□□ 0.13
HDGF-206ENST00000471377 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.12
HDGF-206ENST00000471377 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
HDGF-206ENST00000471377 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
HDGF-206ENST00000471377 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
HDGF-206ENST00000471377 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
HDGF-206ENST00000471377 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
HDGF-206ENST00000471377 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
HDGF-206ENST00000471377 WDR97A6NE52 1622 aa15.75■□□□□ 0.11
HDGF-206ENST00000471377 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.113e-7■■■■■ 41.1
HDGF-206ENST00000471377 BIVM-ERCC5R4GMW8 1640 aa15.74■□□□□ 0.11
HDGF-206ENST00000471377 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
HDGF-206ENST00000471377 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
HDGF-206ENST00000471377 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
HDGF-206ENST00000471377 GRIN2BQ13224 1484 aa15.66■□□□□ 0.1
HDGF-206ENST00000471377 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
HDGF-206ENST00000471377 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
HDGF-206ENST00000471377 SNAPC4Q5SXM2 1469 aa15.62■□□□□ 0.09
HDGF-206ENST00000471377 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
HDGF-206ENST00000471377 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
HDGF-206ENST00000471377 FBLN2P98095 1184 aa15.6■□□□□ 0.09
HDGF-206ENST00000471377 CHMP7Q8WUX9 453 aaPredicted RBP15.57■□□□□ 0.08
HDGF-206ENST00000471377 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
HDGF-206ENST00000471377 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
HDGF-206ENST00000471377 CHD1O14646 1710 aa15.53■□□□□ 0.08
HDGF-206ENST00000471377 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
HDGF-206ENST00000471377 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
HDGF-206ENST00000471377 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
HDGF-206ENST00000471377 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
HDGF-206ENST00000471377 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
HDGF-206ENST00000471377 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
HDGF-206ENST00000471377 IGF1RP08069 1367 aa15.4■□□□□ 0.06
HDGF-206ENST00000471377 CLASP1Q7Z460 1538 aa15.4■□□□□ 0.06
HDGF-206ENST00000471377 CUL7Q14999 1698 aa15.38■□□□□ 0.05
HDGF-206ENST00000471377 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
HDGF-206ENST00000471377 NUP160Q12769 1436 aa15.37■□□□□ 0.05
HDGF-206ENST00000471377 RIMBP3CA6NJZ7 1639 aa15.35■□□□□ 0.05
HDGF-206ENST00000471377 RIMBP3BA6NNM3 1639 aa15.35■□□□□ 0.05
HDGF-206ENST00000471377 RIMBP3Q9UFD9 1639 aa15.35■□□□□ 0.05
HDGF-206ENST00000471377 CARMIL1Q5VZK9 1371 aa15.34■□□□□ 0.05
HDGF-206ENST00000471377 CEP170Q5SW79 1584 aa15.33■□□□□ 0.05
HDGF-206ENST00000471377 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
HDGF-206ENST00000471377 RAPGEF2Q9Y4G8 1499 aa15.26■□□□□ 0.03
HDGF-206ENST00000471377 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
HDGF-206ENST00000471377 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
HDGF-206ENST00000471377 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms