RNA–Protein interactions for RNA: ENST00000446248.4

CAMSAP3-202, Transcript of calmodulin regulated spectrin associated protein family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAMSAP3, Length 4,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMSAP3-202ENST00000446248 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
CAMSAP3-202ENST00000446248 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
CAMSAP3-202ENST00000446248 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
CAMSAP3-202ENST00000446248 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.76
CAMSAP3-202ENST00000446248 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
CAMSAP3-202ENST00000446248 PCGF6Q9BYE7 350 aa24.49■■□□□ 1.51
CAMSAP3-202ENST00000446248 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
CAMSAP3-202ENST00000446248 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.46
CAMSAP3-202ENST00000446248 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
CAMSAP3-202ENST00000446248 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
CAMSAP3-202ENST00000446248 TTBK1Q5TCY1 1321 aaPredicted RBP23.88■■□□□ 1.41
CAMSAP3-202ENST00000446248 HRCP23327 699 aa23.71■■□□□ 1.39
CAMSAP3-202ENST00000446248 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
CAMSAP3-202ENST00000446248 ZCCHC6Q5VYS8 1495 aaKnown RBP23.57■■□□□ 1.36
CAMSAP3-202ENST00000446248 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
CAMSAP3-202ENST00000446248 APLP2Q06481 763 aa23.52■■□□□ 1.36
CAMSAP3-202ENST00000446248 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
CAMSAP3-202ENST00000446248 ZEB1P37275 1124 aaPredicted RBP23.48■■□□□ 1.35
CAMSAP3-202ENST00000446248 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
CAMSAP3-202ENST00000446248 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
CAMSAP3-202ENST00000446248 ABCC9O60706 1549 aa23.35■■□□□ 1.33
CAMSAP3-202ENST00000446248 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
CAMSAP3-202ENST00000446248 MYO15BQ96JP2 1530 aa23.01■■□□□ 1.27
CAMSAP3-202ENST00000446248 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
CAMSAP3-202ENST00000446248 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.273e-6■■□□□ 12.4
CAMSAP3-202ENST00000446248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.92■■□□□ 1.26
CAMSAP3-202ENST00000446248 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
CAMSAP3-202ENST00000446248 ATP1B4Q9UN42 357 aaPredicted RBP22.86■■□□□ 1.25
CAMSAP3-202ENST00000446248 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
CAMSAP3-202ENST00000446248 YTHDC1Q96MU7 727 aaKnown RBP22.79■■□□□ 1.24
CAMSAP3-202ENST00000446248 PELP1Q8IZL8 1130 aaKnown RBP22.7■■□□□ 1.22
CAMSAP3-202ENST00000446248 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
CAMSAP3-202ENST00000446248 ITGAEP38570 1179 aa22.61■■□□□ 1.21
CAMSAP3-202ENST00000446248 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
CAMSAP3-202ENST00000446248 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
CAMSAP3-202ENST00000446248 CSRNP3Q8WYN3 585 aa22.48■■□□□ 1.19
CAMSAP3-202ENST00000446248 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
CAMSAP3-202ENST00000446248 NACADO15069 1562 aa22.17■■□□□ 1.14
CAMSAP3-202ENST00000446248 RB1CC1Q8TDY2 1594 aa22.13■■□□□ 1.13
CAMSAP3-202ENST00000446248 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
CAMSAP3-202ENST00000446248 FAM50AQ14320 339 aaKnown RBP22.09■■□□□ 1.13
CAMSAP3-202ENST00000446248 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.12
CAMSAP3-202ENST00000446248 NEFLP07196 543 aa22.01■■□□□ 1.11
CAMSAP3-202ENST00000446248 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
CAMSAP3-202ENST00000446248 ACIN1Q9UKV3 1341 aaKnown RBP21.97■■□□□ 1.11
CAMSAP3-202ENST00000446248 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
CAMSAP3-202ENST00000446248 NEUROD1Q13562 356 aa21.95■■□□□ 1.11
CAMSAP3-202ENST00000446248 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
CAMSAP3-202ENST00000446248 MYT1Q01538 1121 aa21.92■■□□□ 1.1
CAMSAP3-202ENST00000446248 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
CAMSAP3-202ENST00000446248 CLIP1P30622 1438 aa21.83■■□□□ 1.09
CAMSAP3-202ENST00000446248 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
CAMSAP3-202ENST00000446248 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
CAMSAP3-202ENST00000446248 SOGA1O94964 1423 aa21.79■■□□□ 1.08
CAMSAP3-202ENST00000446248 CNGB1Q14028 1251 aaPredicted RBP21.78■■□□□ 1.08
CAMSAP3-202ENST00000446248 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
CAMSAP3-202ENST00000446248 EEA1Q15075 1411 aa21.77■■□□□ 1.08
CAMSAP3-202ENST00000446248 GOLGA3Q08378 1498 aa21.77■■□□□ 1.07
CAMSAP3-202ENST00000446248 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.07
CAMSAP3-202ENST00000446248 WIZO95785 1651 aa21.76■■□□□ 1.07
CAMSAP3-202ENST00000446248 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
CAMSAP3-202ENST00000446248 ERICH6Q7L0X2 663 aa21.71■■□□□ 1.07
CAMSAP3-202ENST00000446248 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
CAMSAP3-202ENST00000446248 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
CAMSAP3-202ENST00000446248 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
CAMSAP3-202ENST00000446248 ARID3CA6NKF2 412 aa21.64■■□□□ 1.05
CAMSAP3-202ENST00000446248 MIER1Q8N108 512 aa21.61■■□□□ 1.05
CAMSAP3-202ENST00000446248 BCANQ96GW7 911 aa21.6■■□□□ 1.05
CAMSAP3-202ENST00000446248 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.05
CAMSAP3-202ENST00000446248 ANP32CO43423 234 aa21.51■■□□□ 1.03
CAMSAP3-202ENST00000446248 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
CAMSAP3-202ENST00000446248 FBLN2P98095 1184 aa21.45■■□□□ 1.02
CAMSAP3-202ENST00000446248 DDX10Q13206 875 aaKnown RBP21.44■■□□□ 1.02
CAMSAP3-202ENST00000446248 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
CAMSAP3-202ENST00000446248 KIF27Q86VH2 1401 aa21.39■■□□□ 1.01
CAMSAP3-202ENST00000446248 RUSC2Q8N2Y8 1516 aa21.38■■□□□ 1.01
CAMSAP3-202ENST00000446248 MYT1LQ9UL68 1186 aa21.37■■□□□ 1.01
CAMSAP3-202ENST00000446248 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
CAMSAP3-202ENST00000446248 TONSLQ96HA7 1378 aa21.33■■□□□ 1
CAMSAP3-202ENST00000446248 CHIC2Q9UKJ5 165 aa21.32■■□□□ 1
CAMSAP3-202ENST00000446248 SMARCA4P51532 1647 aa21.32■■□□□ 1
CAMSAP3-202ENST00000446248 VPS8Q8N3P4 1428 aa21.3■■□□□ 1
CAMSAP3-202ENST00000446248 ZNF777Q9ULD5 760 aaPredicted RBP21.26■□□□□ 0.99
CAMSAP3-202ENST00000446248 KANK4Q5T7N3 995 aaPredicted RBP21.26■□□□□ 0.99
CAMSAP3-202ENST00000446248 MTUS2Q5JR59 1369 aa21.26■□□□□ 0.99
CAMSAP3-202ENST00000446248 FKBP8Q14318 412 aa21.2■□□□□ 0.98
CAMSAP3-202ENST00000446248 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
CAMSAP3-202ENST00000446248 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
CAMSAP3-202ENST00000446248 CUX2O14529 1486 aa21.16■□□□□ 0.98
CAMSAP3-202ENST00000446248 RAPGEF2Q9Y4G8 1499 aa21.16■□□□□ 0.98
CAMSAP3-202ENST00000446248 ATAD2BQ9ULI0 1458 aa21.15■□□□□ 0.98
CAMSAP3-202ENST00000446248 CCNB3Q8WWL7 1395 aa21.15■□□□□ 0.98
CAMSAP3-202ENST00000446248 RRP7BPQ9NSQ0 103 aa21.13■□□□□ 0.97
CAMSAP3-202ENST00000446248 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
CAMSAP3-202ENST00000446248 CARMIL1Q5VZK9 1371 aa21.12■□□□□ 0.97
CAMSAP3-202ENST00000446248 HNRNPUQ00839 825 aaKnown RBP eCLIP21.1■□□□□ 0.97
CAMSAP3-202ENST00000446248 CLSPNQ9HAW4 1339 aa21.08■□□□□ 0.97
CAMSAP3-202ENST00000446248 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
CAMSAP3-202ENST00000446248 UNC13AQ9UPW8 1703 aa20.97■□□□□ 0.95
CAMSAP3-202ENST00000446248 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms