RNA–Protein interactions for RNA: ENST00000613129.4

SURF4-208, Transcript of surfeit 4, humanhuman

TSL 2 BASIC

Gene SURF4, Length 3,148 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-208ENST00000613129 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
SURF4-208ENST00000613129 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
SURF4-208ENST00000613129 SUPT5HO00267 1087 aaKnown RBP28.52■■■□□ 2.16
SURF4-208ENST00000613129 HRCP23327 699 aa27.96■■■□□ 2.07
SURF4-208ENST00000613129 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
SURF4-208ENST00000613129 PCGF6Q9BYE7 350 aa27.92■■■□□ 2.06
SURF4-208ENST00000613129 MYO15BQ96JP2 1530 aa27.69■■■□□ 2.02
SURF4-208ENST00000613129 CHIC1Q5VXU3 224 aa27.58■■■□□ 2.01
SURF4-208ENST00000613129 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
SURF4-208ENST00000613129 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
SURF4-208ENST00000613129 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
SURF4-208ENST00000613129 EHMT2Q96KQ7 1210 aa26.74■■□□□ 1.87
SURF4-208ENST00000613129 TRIM26Q12899 539 aaPredicted RBP26.68■■□□□ 1.86
SURF4-208ENST00000613129 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
SURF4-208ENST00000613129 FAM9AQ8IZU1 332 aaPredicted RBP26.52■■□□□ 1.84
SURF4-208ENST00000613129 SCAF1Q9H7N4 1312 aaKnown RBP26.5■■□□□ 1.83
SURF4-208ENST00000613129 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
SURF4-208ENST00000613129 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.78
SURF4-208ENST00000613129 ZEB1P37275 1124 aaPredicted RBP26.14■■□□□ 1.77
SURF4-208ENST00000613129 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
SURF4-208ENST00000613129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.99■■□□□ 1.75
SURF4-208ENST00000613129 TTBK1Q5TCY1 1321 aaPredicted RBP25.96■■□□□ 1.75
SURF4-208ENST00000613129 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
SURF4-208ENST00000613129 CCER1Q8TC90 406 aaPredicted RBP25.8■■□□□ 1.72
SURF4-208ENST00000613129 ACIN1Q9UKV3 1341 aaKnown RBP25.78■■□□□ 1.72
SURF4-208ENST00000613129 GTF3C3Q9Y5Q9 886 aa25.77■■□□□ 1.72
SURF4-208ENST00000613129 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
SURF4-208ENST00000613129 RSF1Q96T23 1441 aaPredicted RBP25.57■■□□□ 1.68
SURF4-208ENST00000613129 YTHDC1Q96MU7 727 aaKnown RBP25.55■■□□□ 1.68
SURF4-208ENST00000613129 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
SURF4-208ENST00000613129 CENPBP07199 599 aaPredicted RBP25.42■■□□□ 1.66
SURF4-208ENST00000613129 SCRIBQ14160 1630 aa25.39■■□□□ 1.65
SURF4-208ENST00000613129 ABCC9O60706 1549 aa25.38■■□□□ 1.65
SURF4-208ENST00000613129 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
SURF4-208ENST00000613129 MIER1Q8N108 512 aa25.07■■□□□ 1.6
SURF4-208ENST00000613129 ZNF316A6NFI3 1004 aaPredicted RBP25.05■■□□□ 1.6
SURF4-208ENST00000613129 HNRNPUL2Q1KMD3 747 aaKnown RBP25.01■■□□□ 1.59
SURF4-208ENST00000613129 UBTFP17480 764 aaKnown RBP24.95■■□□□ 1.58
SURF4-208ENST00000613129 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
SURF4-208ENST00000613129 MYT1Q01538 1121 aa24.88■■□□□ 1.57
SURF4-208ENST00000613129 RANGAP1P46060 587 aaPredicted RBP24.87■■□□□ 1.57
SURF4-208ENST00000613129 WIZO95785 1651 aa24.83■■□□□ 1.56
SURF4-208ENST00000613129 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
SURF4-208ENST00000613129 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
SURF4-208ENST00000613129 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
SURF4-208ENST00000613129 SOGA1O94964 1423 aa24.74■■□□□ 1.55
SURF4-208ENST00000613129 RUSC2Q8N2Y8 1516 aa24.64■■□□□ 1.53
SURF4-208ENST00000613129 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
SURF4-208ENST00000613129 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
SURF4-208ENST00000613129 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
SURF4-208ENST00000613129 SUPT16HQ9Y5B9 1047 aaKnown RBP24.45■■□□□ 1.5
SURF4-208ENST00000613129 BCANQ96GW7 911 aa24.4■■□□□ 1.5
SURF4-208ENST00000613129 APLP2Q06481 763 aa24.37■■□□□ 1.49
SURF4-208ENST00000613129 KCNH8Q96L42 1107 aa24.33■■□□□ 1.49
SURF4-208ENST00000613129 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
SURF4-208ENST00000613129 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
SURF4-208ENST00000613129 TSHZ2Q9NRE2 1034 aa24.28■■□□□ 1.48
SURF4-208ENST00000613129 ITGAEP38570 1179 aa24.24■■□□□ 1.47
SURF4-208ENST00000613129 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
SURF4-208ENST00000613129 CLIP1P30622 1438 aa24.17■■□□□ 1.46
SURF4-208ENST00000613129 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
SURF4-208ENST00000613129 NACADO15069 1562 aa24.1■■□□□ 1.45
SURF4-208ENST00000613129 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
SURF4-208ENST00000613129 ANP32EQ9BTT0 268 aa24.08■■□□□ 1.45
SURF4-208ENST00000613129 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
SURF4-208ENST00000613129 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
SURF4-208ENST00000613129 FKBP8Q14318 412 aa24.03■■□□□ 1.44
SURF4-208ENST00000613129 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.44
SURF4-208ENST00000613129 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
SURF4-208ENST00000613129 EEA1Q15075 1411 aa24■■□□□ 1.43
SURF4-208ENST00000613129 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
SURF4-208ENST00000613129 BCL11AQ9H165 835 aa23.97■■□□□ 1.43
SURF4-208ENST00000613129 RAPGEF2Q9Y4G8 1499 aa23.96■■□□□ 1.43
SURF4-208ENST00000613129 DDX10Q13206 875 aaKnown RBP23.93■■□□□ 1.42
SURF4-208ENST00000613129 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
SURF4-208ENST00000613129 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
SURF4-208ENST00000613129 TRIM52Q96A61 297 aa23.88■■□□□ 1.41
SURF4-208ENST00000613129 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
SURF4-208ENST00000613129 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
SURF4-208ENST00000613129 KIF21BO75037 1637 aa23.79■■□□□ 1.4
SURF4-208ENST00000613129 CLSPNQ9HAW4 1339 aa23.79■■□□□ 1.4
SURF4-208ENST00000613129 RBM19Q9Y4C8 960 aaKnown RBP23.76■■□□□ 1.39
SURF4-208ENST00000613129 IRX6P78412 446 aaPredicted RBP23.7■■□□□ 1.38
SURF4-208ENST00000613129 NEFLP07196 543 aa23.66■■□□□ 1.38
SURF4-208ENST00000613129 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
SURF4-208ENST00000613129 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
SURF4-208ENST00000613129 RAB3GAP2Q9H2M9 1393 aa23.57■■□□□ 1.36
SURF4-208ENST00000613129 MSH5O43196 834 aa23.57■■□□□ 1.36
SURF4-208ENST00000613129 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
SURF4-208ENST00000613129 CCNB3Q8WWL7 1395 aa23.55■■□□□ 1.36
SURF4-208ENST00000613129 BAZ1BQ9UIG0 1483 aaKnown RBP23.52■■□□□ 1.36
SURF4-208ENST00000613129 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
SURF4-208ENST00000613129 ANP32CO43423 234 aa23.46■■□□□ 1.35
SURF4-208ENST00000613129 PPP1R15AO75807 674 aaPredicted RBP23.45■■□□□ 1.34
SURF4-208ENST00000613129 WDR97A6NE52 1622 aa23.45■■□□□ 1.34
SURF4-208ENST00000613129 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
SURF4-208ENST00000613129 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
SURF4-208ENST00000613129 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
SURF4-208ENST00000613129 HNRNPUQ00839 825 aaKnown RBP eCLIP23.37■■□□□ 1.33
SURF4-208ENST00000613129 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms