RNA–Protein interactions for RNA: ENST00000469145.5

HDGF-205, Transcript of heparin binding growth factor, humanhuman

TSL 2

Gene HDGF, Length 844 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-205ENST00000469145 NISCHQ9Y2I1 1504 aa46.58■■■■■ 5.05
HDGF-205ENST00000469145 CCDC180Q9P1Z9 1646 aa41.12■■■■■ 4.17
HDGF-205ENST00000469145 ABCC9O60706 1549 aa40.82■■■■■ 4.12
HDGF-205ENST00000469145 ZCCHC6Q5VYS8 1495 aaKnown RBP39.07■■■■□ 3.85
HDGF-205ENST00000469145 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
HDGF-205ENST00000469145 DCAF1Q9Y4B6 1507 aa38.71■■■■□ 3.79
HDGF-205ENST00000469145 NACADO15069 1562 aa38.6■■■■□ 3.77
HDGF-205ENST00000469145 MYO15BQ96JP2 1530 aa38.47■■■■□ 3.75
HDGF-205ENST00000469145 DCAF8L2P0C7V8 631 aa38.3■■■■□ 3.72
HDGF-205ENST00000469145 DNAJC5BQ9UF47 199 aa38.2■■■■□ 3.71
HDGF-205ENST00000469145 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
HDGF-205ENST00000469145 PABPN1Q86U42 306 aaKnown RBP eCLIP37.94■■■■□ 3.66
HDGF-205ENST00000469145 BICRAQ9NZM4 1560 aa37.81■■■■□ 3.64
HDGF-205ENST00000469145 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
HDGF-205ENST00000469145 SHROOM4Q9ULL8 1493 aa37.34■■■■□ 3.57
HDGF-205ENST00000469145 CC2D2AQ9P2K1 1620 aa36.91■■■■□ 3.5
HDGF-205ENST00000469145 EIF4G1Q04637 1599 aaKnown RBP36.83■■■■□ 3.49
HDGF-205ENST00000469145 CECR2Q9BXF3 1484 aa36.74■■■■□ 3.47
HDGF-205ENST00000469145 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
HDGF-205ENST00000469145 SMARCA4P51532 1647 aa35.96■■■■□ 3.35
HDGF-205ENST00000469145 RSF1Q96T23 1441 aaPredicted RBP35.84■■■■□ 3.33
HDGF-205ENST00000469145 MROH2BQ7Z745 1585 aa35.84■■■■□ 3.33
HDGF-205ENST00000469145 SUPT5HO00267 1087 aaKnown RBP35.75■■■■□ 3.31
HDGF-205ENST00000469145 PEG3Q9GZU2 1588 aa35.61■■■■□ 3.29
HDGF-205ENST00000469145 NCAPD3P42695 1498 aa35.6■■■■□ 3.29
HDGF-205ENST00000469145 WIZO95785 1651 aa35.57■■■■□ 3.28
HDGF-205ENST00000469145 SMARCA2P51531 1590 aa35.56■■■■□ 3.28
HDGF-205ENST00000469145 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
HDGF-205ENST00000469145 HMGXB3Q12766 1538 aa35.42■■■■□ 3.26
HDGF-205ENST00000469145 TOP2AP11388 1531 aaKnown RBP35.36■■■■□ 3.25
HDGF-205ENST00000469145 BAZ1BQ9UIG0 1483 aaKnown RBP35.25■■■■□ 3.23
HDGF-205ENST00000469145 ERCC6Q03468 1493 aa35.19■■■■□ 3.22
HDGF-205ENST00000469145 CUX2O14529 1486 aa35.12■■■■□ 3.21
HDGF-205ENST00000469145 NESP48681 1621 aa35.11■■■■□ 3.21
HDGF-205ENST00000469145 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
HDGF-205ENST00000469145 LAMC3Q9Y6N6 1575 aa34.84■■■■□ 3.17
HDGF-205ENST00000469145 THOC2Q8NI27 1593 aaKnown RBP34.8■■■■□ 3.16
HDGF-205ENST00000469145 CCDC88BA6NC98 1476 aa34.79■■■■□ 3.16
HDGF-205ENST00000469145 KIF21AQ7Z4S6 1674 aa34.73■■■■□ 3.15
HDGF-205ENST00000469145 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
HDGF-205ENST00000469145 CADPSQ9ULU8 1353 aa34.5■■■■□ 3.11
HDGF-205ENST00000469145 PRDM2Q13029 1718 aa34.4■■■■□ 3.1
HDGF-205ENST00000469145 MRC2Q9UBG0 1479 aa34.33■■■■□ 3.09
HDGF-205ENST00000469145 CFTRP13569 1480 aa34.29■■■■□ 3.08
HDGF-205ENST00000469145 WDR62O43379 1518 aa34.28■■■■□ 3.08
HDGF-205ENST00000469145 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.07
HDGF-205ENST00000469145 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
HDGF-205ENST00000469145 CHIC1Q5VXU3 224 aa34.02■■■■□ 3.04
HDGF-205ENST00000469145 URB2Q14146 1524 aaKnown RBP33.93■■■■□ 3.02
HDGF-205ENST00000469145 ABCC8Q09428 1581 aa33.88■■■■□ 3.01
HDGF-205ENST00000469145 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
HDGF-205ENST00000469145 TRIM41Q8WV44 630 aa33.82■■■■□ 3
HDGF-205ENST00000469145 BIVM-ERCC5R4GMW8 1640 aa33.74■■■□□ 2.99
HDGF-205ENST00000469145 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
HDGF-205ENST00000469145 SYNJ1O43426 1573 aa33.68■■■□□ 2.98
HDGF-205ENST00000469145 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
HDGF-205ENST00000469145 CUX1P39880 1505 aa33.58■■■□□ 2.97
HDGF-205ENST00000469145 TOPBP1Q92547 1522 aa33.55■■■□□ 2.96
HDGF-205ENST00000469145 IFT140Q96RY7 1462 aa33.5■■■□□ 2.95
HDGF-205ENST00000469145 ZNF608Q9ULD9 1512 aaPredicted RBP33.49■■■□□ 2.95
HDGF-205ENST00000469145 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
HDGF-205ENST00000469145 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
HDGF-205ENST00000469145 EEA1Q15075 1411 aa33.36■■■□□ 2.93
HDGF-205ENST00000469145 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
HDGF-205ENST00000469145 TARBP1Q13395 1621 aaKnown RBP33.29■■■□□ 2.92
HDGF-205ENST00000469145 POLA1P09884 1462 aaPredicted RBP33.23■■■□□ 2.91
HDGF-205ENST00000469145 RIMBP3CA6NJZ7 1639 aa33.17■■■□□ 2.9
HDGF-205ENST00000469145 RIMBP3BA6NNM3 1639 aa33.17■■■□□ 2.9
HDGF-205ENST00000469145 RIMBP3Q9UFD9 1639 aa33.17■■■□□ 2.9
HDGF-205ENST00000469145 AQRO60306 1485 aaKnown RBP eCLIP33.15■■■□□ 2.93e-7■■■■■ 41.1
HDGF-205ENST00000469145 CHD1O14646 1710 aa33.14■■■□□ 2.89
HDGF-205ENST00000469145 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
HDGF-205ENST00000469145 SOGA1O94964 1423 aa33.11■■■□□ 2.89
HDGF-205ENST00000469145 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
HDGF-205ENST00000469145 ABCA10Q8WWZ4 1543 aa33.1■■■□□ 2.89
HDGF-205ENST00000469145 RAD54L2Q9Y4B4 1467 aa33.09■■■□□ 2.89
HDGF-205ENST00000469145 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
HDGF-205ENST00000469145 FAM9AQ8IZU1 332 aaPredicted RBP32.95■■■□□ 2.87
HDGF-205ENST00000469145 TDRD9Q8NDG6 1382 aaKnown RBP32.94■■■□□ 2.86
HDGF-205ENST00000469145 CSRNP3Q8WYN3 585 aa32.91■■■□□ 2.86
HDGF-205ENST00000469145 RUSC2Q8N2Y8 1516 aa32.91■■■□□ 2.86
HDGF-205ENST00000469145 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
HDGF-205ENST00000469145 KIF21BO75037 1637 aa32.88■■■□□ 2.85
HDGF-205ENST00000469145 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
HDGF-205ENST00000469145 FBLN2P98095 1184 aa32.83■■■□□ 2.85
HDGF-205ENST00000469145 CUL7Q14999 1698 aa32.82■■■□□ 2.84
HDGF-205ENST00000469145 ERICH3Q5RHP9 1530 aa32.79■■■□□ 2.84
HDGF-205ENST00000469145 GAPVD1Q14C86 1478 aa32.79■■■□□ 2.84
HDGF-205ENST00000469145 PBRM1Q86U86 1689 aa32.77■■■□□ 2.84
HDGF-205ENST00000469145 GOLGA3Q08378 1498 aa32.75■■■□□ 2.83
HDGF-205ENST00000469145 MAGI1Q96QZ7 1491 aaPredicted RBP32.74■■■□□ 2.83
HDGF-205ENST00000469145 GRIN2BQ13224 1484 aa32.73■■■□□ 2.83
HDGF-205ENST00000469145 ARAP1Q96P48 1450 aa32.73■■■□□ 2.83
HDGF-205ENST00000469145 CLASP1Q7Z460 1538 aa32.71■■■□□ 2.83
HDGF-205ENST00000469145 PRXQ9BXM0 1461 aa32.68■■■□□ 2.82
HDGF-205ENST00000469145 CYB5RLQ6IPT4 315 aa32.66■■■□□ 2.82
HDGF-205ENST00000469145 IGF1RP08069 1367 aa32.66■■■□□ 2.82
HDGF-205ENST00000469145 SYNJ2O15056 1496 aa32.62■■■□□ 2.81
HDGF-205ENST00000469145 CHMP7Q8WUX9 453 aaPredicted RBP32.59■■■□□ 2.81
HDGF-205ENST00000469145 RAPGEF2Q9Y4G8 1499 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms