RNA–Protein interactions for RNA: ENST00000465180.5

HDGF-204, Transcript of heparin binding growth factor, humanhuman

TSL 1 (best)

Gene HDGF, Length 2,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-204ENST00000465180 NISCHQ9Y2I1 1504 aa35.64■■■■□ 3.3
HDGF-204ENST00000465180 CCDC180Q9P1Z9 1646 aa31.15■■■□□ 2.58
HDGF-204ENST00000465180 ABCC9O60706 1549 aa29.87■■■□□ 2.37
HDGF-204ENST00000465180 ZCCHC6Q5VYS8 1495 aaKnown RBP29.86■■■□□ 2.37
HDGF-204ENST00000465180 DCAF8L2P0C7V8 631 aa29.71■■■□□ 2.35
HDGF-204ENST00000465180 DCAF1Q9Y4B6 1507 aa29.43■■■□□ 2.3
HDGF-204ENST00000465180 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.26
HDGF-204ENST00000465180 NACADO15069 1562 aa29.14■■■□□ 2.26
HDGF-204ENST00000465180 RB1CC1Q8TDY2 1594 aa28.98■■■□□ 2.23
HDGF-204ENST00000465180 SHROOM4Q9ULL8 1493 aa28.95■■■□□ 2.23
HDGF-204ENST00000465180 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
HDGF-204ENST00000465180 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
HDGF-204ENST00000465180 PABPN1Q86U42 306 aaKnown RBP eCLIP28.17■■■□□ 2.1
HDGF-204ENST00000465180 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
HDGF-204ENST00000465180 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.03
HDGF-204ENST00000465180 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
HDGF-204ENST00000465180 RSF1Q96T23 1441 aaPredicted RBP27.55■■■□□ 2
HDGF-204ENST00000465180 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
HDGF-204ENST00000465180 BAZ1AQ9NRL2 1556 aaPredicted RBP27.54■■■□□ 2
HDGF-204ENST00000465180 SMARCA4P51532 1647 aa27.44■■□□□ 1.98
HDGF-204ENST00000465180 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
HDGF-204ENST00000465180 WIZO95785 1651 aa27.28■■□□□ 1.96
HDGF-204ENST00000465180 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
HDGF-204ENST00000465180 PEG3Q9GZU2 1588 aa27.1■■□□□ 1.93
HDGF-204ENST00000465180 SMARCA2P51531 1590 aa27.06■■□□□ 1.92
HDGF-204ENST00000465180 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
HDGF-204ENST00000465180 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
HDGF-204ENST00000465180 BAZ1BQ9UIG0 1483 aaKnown RBP26.94■■□□□ 1.9
HDGF-204ENST00000465180 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
HDGF-204ENST00000465180 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
HDGF-204ENST00000465180 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
HDGF-204ENST00000465180 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
HDGF-204ENST00000465180 CHIC1Q5VXU3 224 aa26.33■■□□□ 1.81
HDGF-204ENST00000465180 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
HDGF-204ENST00000465180 CFTRP13569 1480 aa26.24■■□□□ 1.79
HDGF-204ENST00000465180 NESP48681 1621 aa26.12■■□□□ 1.77
HDGF-204ENST00000465180 TRIM41Q8WV44 630 aa26.07■■□□□ 1.76
HDGF-204ENST00000465180 ABCC8Q09428 1581 aa26.06■■□□□ 1.76
HDGF-204ENST00000465180 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
HDGF-204ENST00000465180 PELP1Q8IZL8 1130 aaKnown RBP26.02■■□□□ 1.76
HDGF-204ENST00000465180 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
HDGF-204ENST00000465180 WRNQ14191 1432 aaPredicted RBP eCLIP25.95■■□□□ 1.74
HDGF-204ENST00000465180 FANCD2Q9BXW9 1451 aa25.95■■□□□ 1.74
HDGF-204ENST00000465180 PDS5BQ9NTI5 1447 aa25.9■■□□□ 1.74
HDGF-204ENST00000465180 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
HDGF-204ENST00000465180 CEP164Q9UPV0 1460 aa25.8■■□□□ 1.72
HDGF-204ENST00000465180 CUX1P39880 1505 aa25.76■■□□□ 1.71
HDGF-204ENST00000465180 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
HDGF-204ENST00000465180 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
HDGF-204ENST00000465180 BIVM-ERCC5R4GMW8 1640 aa25.68■■□□□ 1.7
HDGF-204ENST00000465180 ERCC6Q03468 1493 aa25.65■■□□□ 1.7
HDGF-204ENST00000465180 URB2Q14146 1524 aaKnown RBP25.62■■□□□ 1.69
HDGF-204ENST00000465180 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
HDGF-204ENST00000465180 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
HDGF-204ENST00000465180 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
HDGF-204ENST00000465180 HRCP23327 699 aa25.61■■□□□ 1.69
HDGF-204ENST00000465180 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
HDGF-204ENST00000465180 SOGA1O94964 1423 aa25.54■■□□□ 1.68
HDGF-204ENST00000465180 FGD5Q6ZNL6 1462 aa25.54■■□□□ 1.68
HDGF-204ENST00000465180 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
HDGF-204ENST00000465180 RUSC2Q8N2Y8 1516 aa25.47■■□□□ 1.67
HDGF-204ENST00000465180 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
HDGF-204ENST00000465180 WDR62O43379 1518 aa25.41■■□□□ 1.66
HDGF-204ENST00000465180 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.65
HDGF-204ENST00000465180 EEA1Q15075 1411 aa25.38■■□□□ 1.65
HDGF-204ENST00000465180 MYT1Q01538 1121 aa25.36■■□□□ 1.65
HDGF-204ENST00000465180 LOC105371045A0A1W2PR82 267 aa25.35■■□□□ 1.65
HDGF-204ENST00000465180 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
HDGF-204ENST00000465180 CUX2O14529 1486 aa25.34■■□□□ 1.65
HDGF-204ENST00000465180 KIF27Q86VH2 1401 aa25.32■■□□□ 1.64
HDGF-204ENST00000465180 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
HDGF-204ENST00000465180 ABCA10Q8WWZ4 1543 aa25.29■■□□□ 1.64
HDGF-204ENST00000465180 TARBP1Q13395 1621 aaKnown RBP25.22■■□□□ 1.63
HDGF-204ENST00000465180 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
HDGF-204ENST00000465180 IFT140Q96RY7 1462 aa25.2■■□□□ 1.63
HDGF-204ENST00000465180 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
HDGF-204ENST00000465180 IGF1RP08069 1367 aa25.16■■□□□ 1.62
HDGF-204ENST00000465180 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
HDGF-204ENST00000465180 AQRO60306 1485 aaKnown RBP eCLIP25.1■■□□□ 1.613e-7■■■■■ 35.7
HDGF-204ENST00000465180 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
HDGF-204ENST00000465180 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.61
HDGF-204ENST00000465180 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
HDGF-204ENST00000465180 UBTFP17480 764 aaKnown RBP25.03■■□□□ 1.6
HDGF-204ENST00000465180 KIF21BO75037 1637 aa25.03■■□□□ 1.6
HDGF-204ENST00000465180 GOLGA3Q08378 1498 aa25.03■■□□□ 1.6
HDGF-204ENST00000465180 CARMIL1Q5VZK9 1371 aa25.02■■□□□ 1.6
HDGF-204ENST00000465180 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
HDGF-204ENST00000465180 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
HDGF-204ENST00000465180 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
HDGF-204ENST00000465180 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
HDGF-204ENST00000465180 PBRM1Q86U86 1689 aa24.92■■□□□ 1.58
HDGF-204ENST00000465180 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
HDGF-204ENST00000465180 CUL7Q14999 1698 aa24.9■■□□□ 1.58
HDGF-204ENST00000465180 SNAPC4Q5SXM2 1469 aa24.83■■□□□ 1.57
HDGF-204ENST00000465180 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
HDGF-204ENST00000465180 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
HDGF-204ENST00000465180 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
HDGF-204ENST00000465180 MAGI1Q96QZ7 1491 aaPredicted RBP24.76■■□□□ 1.55
HDGF-204ENST00000465180 CEP162Q5TB80 1403 aa24.75■■□□□ 1.55
HDGF-204ENST00000465180 FBLN2P98095 1184 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms