RNA–Protein interactions for RNA: ENST00000485435.6

SURF4-206, Transcript of surfeit 4, humanhuman

TSL 1 (best) BASIC

Gene SURF4, Length 1,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-206ENST00000485435 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.01
SURF4-206ENST00000485435 ABCC9O60706 1549 aa41.86■■■■■ 4.29
SURF4-206ENST00000485435 CCDC180Q9P1Z9 1646 aa41.8■■■■■ 4.28
SURF4-206ENST00000485435 RB1CC1Q8TDY2 1594 aa39.85■■■■□ 3.97
SURF4-206ENST00000485435 NACADO15069 1562 aa39.55■■■■□ 3.92
SURF4-206ENST00000485435 DNAJC5BQ9UF47 199 aa39.46■■■■□ 3.91
SURF4-206ENST00000485435 DCAF8L2P0C7V8 631 aa39.05■■■■□ 3.84
SURF4-206ENST00000485435 MYO15BQ96JP2 1530 aa38.99■■■■□ 3.83
SURF4-206ENST00000485435 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
SURF4-206ENST00000485435 PABPN1Q86U42 306 aaKnown RBP eCLIP38.88■■■■□ 3.81
SURF4-206ENST00000485435 BICRAQ9NZM4 1560 aa38.69■■■■□ 3.78
SURF4-206ENST00000485435 ZCCHC6Q5VYS8 1495 aaKnown RBP38.4■■■■□ 3.74
SURF4-206ENST00000485435 DCAF1Q9Y4B6 1507 aa38.38■■■■□ 3.73
SURF4-206ENST00000485435 SHROOM4Q9ULL8 1493 aa38.25■■■■□ 3.71
SURF4-206ENST00000485435 SCRIBQ14160 1630 aa37.94■■■■□ 3.66
SURF4-206ENST00000485435 CC2D2AQ9P2K1 1620 aa37.87■■■■□ 3.65
SURF4-206ENST00000485435 CECR2Q9BXF3 1484 aa37.78■■■■□ 3.64
SURF4-206ENST00000485435 EIF4G1Q04637 1599 aaKnown RBP37.75■■■■□ 3.63
SURF4-206ENST00000485435 NCAPD3P42695 1498 aa36.49■■■■□ 3.43
SURF4-206ENST00000485435 DNAJC5Q9H3Z4 198 aa36.47■■■■□ 3.43
SURF4-206ENST00000485435 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
SURF4-206ENST00000485435 CUX2O14529 1486 aa36.29■■■■□ 3.4
SURF4-206ENST00000485435 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
SURF4-206ENST00000485435 SMARCA4P51532 1647 aa36.23■■■■□ 3.39
SURF4-206ENST00000485435 HMGXB3Q12766 1538 aa36.23■■■■□ 3.39
SURF4-206ENST00000485435 ERCC6Q03468 1493 aa36.18■■■■□ 3.38
SURF4-206ENST00000485435 BAZ1AQ9NRL2 1556 aaPredicted RBP36.03■■■■□ 3.36
SURF4-206ENST00000485435 PEG3Q9GZU2 1588 aa35.95■■■■□ 3.35
SURF4-206ENST00000485435 BAZ1BQ9UIG0 1483 aaKnown RBP35.93■■■■□ 3.34
SURF4-206ENST00000485435 NESP48681 1621 aa35.9■■■■□ 3.34
SURF4-206ENST00000485435 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
SURF4-206ENST00000485435 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
SURF4-206ENST00000485435 THOC2Q8NI27 1593 aaKnown RBP35.68■■■■□ 3.3
SURF4-206ENST00000485435 KIF21AQ7Z4S6 1674 aa35.49■■■■□ 3.27
SURF4-206ENST00000485435 PDS5BQ9NTI5 1447 aa35.49■■■■□ 3.27
SURF4-206ENST00000485435 CADPSQ9ULU8 1353 aa35.33■■■■□ 3.25
SURF4-206ENST00000485435 WIZO95785 1651 aa35.25■■■■□ 3.23
SURF4-206ENST00000485435 MRC2Q9UBG0 1479 aa35.19■■■■□ 3.22
SURF4-206ENST00000485435 WDR62O43379 1518 aa35.14■■■■□ 3.22
SURF4-206ENST00000485435 CEP164Q9UPV0 1460 aa35■■■■□ 3.19
SURF4-206ENST00000485435 FANCD2Q9BXW9 1451 aa34.92■■■■□ 3.18
SURF4-206ENST00000485435 CFTRP13569 1480 aa34.9■■■■□ 3.18
SURF4-206ENST00000485435 RSF1Q96T23 1441 aaPredicted RBP34.87■■■■□ 3.17
SURF4-206ENST00000485435 TOP2AP11388 1531 aaKnown RBP34.83■■■■□ 3.17
SURF4-206ENST00000485435 TRIM41Q8WV44 630 aa34.66■■■■□ 3.14
SURF4-206ENST00000485435 URB2Q14146 1524 aaKnown RBP34.65■■■■□ 3.14
SURF4-206ENST00000485435 PRDM2Q13029 1718 aa34.61■■■■□ 3.13
SURF4-206ENST00000485435 OSCARQ8IYS5 282 aa34.5■■■■□ 3.11
SURF4-206ENST00000485435 CCDC88BA6NC98 1476 aa34.39■■■■□ 3.1
SURF4-206ENST00000485435 IFT140Q96RY7 1462 aa34.32■■■■□ 3.08
SURF4-206ENST00000485435 TOPBP1Q92547 1522 aa34.25■■■■□ 3.07
SURF4-206ENST00000485435 ZNF608Q9ULD9 1512 aaPredicted RBP34.23■■■■□ 3.07
SURF4-206ENST00000485435 ABCC8Q09428 1581 aa34.21■■■■□ 3.07
SURF4-206ENST00000485435 RIMBP3CA6NJZ7 1639 aa34.12■■■■□ 3.05
SURF4-206ENST00000485435 RIMBP3BA6NNM3 1639 aa34.12■■■■□ 3.05
SURF4-206ENST00000485435 RIMBP3Q9UFD9 1639 aa34.12■■■■□ 3.05
SURF4-206ENST00000485435 DNMBPQ6XZF7 1577 aa34.12■■■■□ 3.05
SURF4-206ENST00000485435 EIF4G3O43432 1585 aaKnown RBP34.09■■■■□ 3.05
SURF4-206ENST00000485435 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
SURF4-206ENST00000485435 TARBP1Q13395 1621 aaKnown RBP33.99■■■■□ 3.03
SURF4-206ENST00000485435 CHD1O14646 1710 aa33.88■■■■□ 3.01
SURF4-206ENST00000485435 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.018e-7■■■■□ 26.7
SURF4-206ENST00000485435 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
SURF4-206ENST00000485435 WDR97A6NE52 1622 aa33.71■■■□□ 2.99
SURF4-206ENST00000485435 RAD54L2Q9Y4B4 1467 aa33.7■■■□□ 2.99
SURF4-206ENST00000485435 SOGA1O94964 1423 aa33.7■■■□□ 2.98
SURF4-206ENST00000485435 CYB5RLQ6IPT4 315 aa33.67■■■□□ 2.98
SURF4-206ENST00000485435 ARAP1Q96P48 1450 aa33.63■■■□□ 2.97
SURF4-206ENST00000485435 FBLN2P98095 1184 aa33.63■■■□□ 2.97
SURF4-206ENST00000485435 FGD5Q6ZNL6 1462 aa33.62■■■□□ 2.97
SURF4-206ENST00000485435 TDRD9Q8NDG6 1382 aaKnown RBP33.61■■■□□ 2.97
SURF4-206ENST00000485435 CUX1P39880 1505 aa33.55■■■□□ 2.96
SURF4-206ENST00000485435 SNAPC4Q5SXM2 1469 aa33.55■■■□□ 2.96
SURF4-206ENST00000485435 MAGI1Q96QZ7 1491 aaPredicted RBP33.52■■■□□ 2.96
SURF4-206ENST00000485435 CLASP1Q7Z460 1538 aa33.51■■■□□ 2.95
SURF4-206ENST00000485435 GRIN2BQ13224 1484 aa33.46■■■□□ 2.95
SURF4-206ENST00000485435 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
SURF4-206ENST00000485435 CHMP7Q8WUX9 453 aaPredicted RBP33.41■■■□□ 2.94
SURF4-206ENST00000485435 SYNJ2O15056 1496 aa33.39■■■□□ 2.94
SURF4-206ENST00000485435 PBRM1Q86U86 1689 aa33.34■■■□□ 2.93
SURF4-206ENST00000485435 TRHP20396 242 aaPredicted RBP33.34■■■□□ 2.93
SURF4-206ENST00000485435 GAPVD1Q14C86 1478 aa33.3■■■□□ 2.92
SURF4-206ENST00000485435 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
SURF4-206ENST00000485435 ABCA5Q8WWZ7 1642 aa33.25■■■□□ 2.91
SURF4-206ENST00000485435 WRNQ14191 1432 aaPredicted RBP eCLIP33.06■■■□□ 2.88
SURF4-206ENST00000485435 GRIN2AQ12879 1464 aa33.04■■■□□ 2.88
SURF4-206ENST00000485435 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
SURF4-206ENST00000485435 SUPT5HO00267 1087 aaKnown RBP33.01■■■□□ 2.87
SURF4-206ENST00000485435 ADAMTS12P58397 1594 aa33■■■□□ 2.87
SURF4-206ENST00000485435 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
SURF4-206ENST00000485435 NUP160Q12769 1436 aa32.95■■■□□ 2.87
SURF4-206ENST00000485435 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
SURF4-206ENST00000485435 ERCC6L2Q5T890 1561 aa32.89■■■□□ 2.86
SURF4-206ENST00000485435 FHAD1B1AJZ9 1412 aa32.88■■■□□ 2.85
SURF4-206ENST00000485435 SHROOM2Q13796 1616 aa32.86■■■□□ 2.85
SURF4-206ENST00000485435 ERICH3Q5RHP9 1530 aa32.86■■■□□ 2.85
SURF4-206ENST00000485435 PRG4Q92954 1404 aaPredicted RBP32.6■■■□□ 2.81
SURF4-206ENST00000485435 AEBP2Q6ZN18 517 aaPredicted RBP32.56■■■□□ 2.8
SURF4-206ENST00000485435 RUSC2Q8N2Y8 1516 aa32.55■■■□□ 2.8
SURF4-206ENST00000485435 JPH4Q96JJ6 628 aa32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms