RNA–Protein interactions for RNA: ENST00000368206.5

HDGF-202, Transcript of heparin binding growth factor, humanhuman

TSL 5 BASIC

Gene HDGF, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-202ENST00000368206 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
HDGF-202ENST00000368206 CCDC180Q9P1Z9 1646 aa28.65■■■□□ 2.18
HDGF-202ENST00000368206 ABCC9O60706 1549 aa28.48■■■□□ 2.15
HDGF-202ENST00000368206 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
HDGF-202ENST00000368206 RB1CC1Q8TDY2 1594 aa27.21■■□□□ 1.95
HDGF-202ENST00000368206 NACADO15069 1562 aa27.09■■□□□ 1.93
HDGF-202ENST00000368206 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
HDGF-202ENST00000368206 ZCCHC6Q5VYS8 1495 aaKnown RBP26.66■■□□□ 1.86
HDGF-202ENST00000368206 PABPN1Q86U42 306 aaKnown RBP eCLIP26.64■■□□□ 1.86
HDGF-202ENST00000368206 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
HDGF-202ENST00000368206 DNAJC5BQ9UF47 199 aa26.46■■□□□ 1.83
HDGF-202ENST00000368206 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.83
HDGF-202ENST00000368206 BICRAQ9NZM4 1560 aa26.3■■□□□ 1.8
HDGF-202ENST00000368206 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
HDGF-202ENST00000368206 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
HDGF-202ENST00000368206 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
HDGF-202ENST00000368206 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
HDGF-202ENST00000368206 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
HDGF-202ENST00000368206 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
HDGF-202ENST00000368206 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
HDGF-202ENST00000368206 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
HDGF-202ENST00000368206 BAZ1AQ9NRL2 1556 aaPredicted RBP24.95■■□□□ 1.58
HDGF-202ENST00000368206 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
HDGF-202ENST00000368206 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
HDGF-202ENST00000368206 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
HDGF-202ENST00000368206 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
HDGF-202ENST00000368206 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
HDGF-202ENST00000368206 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
HDGF-202ENST00000368206 NESP48681 1621 aa24.5■■□□□ 1.51
HDGF-202ENST00000368206 WIZO95785 1651 aa24.46■■□□□ 1.51
HDGF-202ENST00000368206 CUX2O14529 1486 aa24.4■■□□□ 1.5
HDGF-202ENST00000368206 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
HDGF-202ENST00000368206 LAMC3Q9Y6N6 1575 aa24.38■■□□□ 1.49
HDGF-202ENST00000368206 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
HDGF-202ENST00000368206 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
HDGF-202ENST00000368206 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
HDGF-202ENST00000368206 DNAJC5Q9H3Z4 198 aa24.14■■□□□ 1.45
HDGF-202ENST00000368206 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
HDGF-202ENST00000368206 THOC2Q8NI27 1593 aaKnown RBP24.11■■□□□ 1.45
HDGF-202ENST00000368206 CFTRP13569 1480 aa24.05■■□□□ 1.44
HDGF-202ENST00000368206 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
HDGF-202ENST00000368206 FANCD2Q9BXW9 1451 aa24.01■■□□□ 1.43
HDGF-202ENST00000368206 CEP164Q9UPV0 1460 aa24.01■■□□□ 1.43
HDGF-202ENST00000368206 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
HDGF-202ENST00000368206 WDR62O43379 1518 aa23.9■■□□□ 1.42
HDGF-202ENST00000368206 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
HDGF-202ENST00000368206 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
HDGF-202ENST00000368206 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
HDGF-202ENST00000368206 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
HDGF-202ENST00000368206 TOPBP1Q92547 1522 aa23.57■■□□□ 1.36
HDGF-202ENST00000368206 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
HDGF-202ENST00000368206 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
HDGF-202ENST00000368206 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
HDGF-202ENST00000368206 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
HDGF-202ENST00000368206 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
HDGF-202ENST00000368206 SOGA1O94964 1423 aa23.33■■□□□ 1.33
HDGF-202ENST00000368206 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.323e-7■■■■■ 35.7
HDGF-202ENST00000368206 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
HDGF-202ENST00000368206 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
HDGF-202ENST00000368206 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
HDGF-202ENST00000368206 EIF4G3O43432 1585 aaKnown RBP23.25■■□□□ 1.31
HDGF-202ENST00000368206 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
HDGF-202ENST00000368206 FBLN2P98095 1184 aa23.24■■□□□ 1.31
HDGF-202ENST00000368206 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
HDGF-202ENST00000368206 CUX1P39880 1505 aa23.23■■□□□ 1.31
HDGF-202ENST00000368206 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
HDGF-202ENST00000368206 WDR97A6NE52 1622 aa23.08■■□□□ 1.29
HDGF-202ENST00000368206 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
HDGF-202ENST00000368206 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
HDGF-202ENST00000368206 SNAPC4Q5SXM2 1469 aa23.03■■□□□ 1.28
HDGF-202ENST00000368206 CHD1O14646 1710 aa23.02■■□□□ 1.28
HDGF-202ENST00000368206 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
HDGF-202ENST00000368206 MAGI1Q96QZ7 1491 aaPredicted RBP23■■□□□ 1.27
HDGF-202ENST00000368206 ABCA10Q8WWZ4 1543 aa22.99■■□□□ 1.27
HDGF-202ENST00000368206 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
HDGF-202ENST00000368206 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
HDGF-202ENST00000368206 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
HDGF-202ENST00000368206 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
HDGF-202ENST00000368206 ARHGEF11O15085 1522 aa22.94■■□□□ 1.26
HDGF-202ENST00000368206 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
HDGF-202ENST00000368206 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
HDGF-202ENST00000368206 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
HDGF-202ENST00000368206 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
HDGF-202ENST00000368206 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
HDGF-202ENST00000368206 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
HDGF-202ENST00000368206 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
HDGF-202ENST00000368206 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
HDGF-202ENST00000368206 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
HDGF-202ENST00000368206 ARAP1Q96P48 1450 aa22.72■■□□□ 1.23
HDGF-202ENST00000368206 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
HDGF-202ENST00000368206 ADAMTS12P58397 1594 aa22.67■■□□□ 1.22
HDGF-202ENST00000368206 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
HDGF-202ENST00000368206 NUP160Q12769 1436 aa22.62■■□□□ 1.21
HDGF-202ENST00000368206 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
HDGF-202ENST00000368206 CEP170Q5SW79 1584 aa22.57■■□□□ 1.2
HDGF-202ENST00000368206 IGF1RP08069 1367 aa22.56■■□□□ 1.2
HDGF-202ENST00000368206 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
HDGF-202ENST00000368206 PRG4Q92954 1404 aaPredicted RBP22.46■■□□□ 1.19
HDGF-202ENST00000368206 CARMIL1Q5VZK9 1371 aa22.44■■□□□ 1.18
HDGF-202ENST00000368206 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms