Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 HAGHL-214ENST00000567414 735 ntTSL 222.47■■□□□ 1.192e-6■■□□□ 12.3
XRCC6P12956 BRF1-215ENST00000549655 1962 ntTSL 222.47■■□□□ 1.192e-6■■□□□ 12.3
XRCC6P12956 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.35■■□□□ 1.172e-6■■□□□ 12.3
XRCC6P12956 HAGHL-207ENST00000561750 675 ntTSL 221.69■■□□□ 1.062e-6■■□□□ 12.3
XRCC6P12956 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.35■■□□□ 1.012e-6■■□□□ 12.3
XRCC6P12956 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.932e-6■■□□□ 12.3
XRCC6P12956 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.64■□□□□ 0.892e-6■■□□□ 12.3
XRCC6P12956 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.37■□□□□ 0.852e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.01■□□□□ 0.792e-6■■□□□ 12.3
XRCC6P12956 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.772e-6■■□□□ 12.3
XRCC6P12956 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.61■□□□□ 0.732e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-207ENST00000510395 1404 ntTSL 219.26■□□□□ 0.672e-6■■□□□ 12.3
XRCC6P12956 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.672e-6■■□□□ 12.3
XRCC6P12956 HAGHL-208ENST00000562141 650 ntTSL 519.15■□□□□ 0.662e-6■■□□□ 12.3
XRCC6P12956 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.94■□□□□ 0.622e-6■■□□□ 12.3
XRCC6P12956 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.61■□□□□ 0.572e-6■■□□□ 12.3
XRCC6P12956 DTNBP1-205ENST00000506844 1542 ntTSL 1 (best)18.45■□□□□ 0.542e-6■■□□□ 12.3
XRCC6P12956 TBC1D20-204ENST00000494633 3820 ntTSL 217.57■□□□□ 0.42e-6■■□□□ 12.3
XRCC6P12956 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.2■□□□□ 0.342e-6■■□□□ 12.3
XRCC6P12956 BRF1-220ENST00000552127 778 ntTSL 417.1■□□□□ 0.332e-6■■□□□ 12.3
XRCC6P12956 WDR34-206ENST00000483181 801 ntTSL 215.9■□□□□ 0.142e-6■■□□□ 12.3
XRCC6P12956 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.12e-6■■□□□ 12.3
XRCC6P12956 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC15.33■□□□□ 0.042e-6■■□□□ 12.3
XRCC6P12956 HAGHL-209ENST00000562187 100 ntTSL 314.77□□□□□ -0.052e-6■■□□□ 12.3
XRCC6P12956 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC14.73□□□□□ -0.052e-6■■□□□ 12.3
XRCC6P12956 BRF1-204ENST00000392557 3579 ntTSL 1 (best) BASIC13.55□□□□□ -0.242e-6■■□□□ 12.3
XRCC6P12956 BRF1-207ENST00000546417 554 ntTSL 313.18□□□□□ -0.32e-6■■□□□ 12.3
XRCC6P12956 MTMR4-201ENST00000323456 5839 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.492e-6■■□□□ 12.3
XRCC6P12956 SPEN-204ENST00000471538 1404 ntTSL 27.72□□□□□ -1.172e-6■■□□□ 12.3
XRCC6P12956 SPEN-202ENST00000438066 1733 ntTSL 36.97□□□□□ -1.292e-6■■□□□ 12.3
XRCC6P12956 MSH6-202ENST00000411819 548 ntTSL 424.76■■□□□ 1.552e-10■■□□□ 12.2
XRCC6P12956 MSH6-207ENST00000456246 846 ntTSL 319.93■□□□□ 0.782e-10■■□□□ 12.2
XRCC6P12956 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC16.82■□□□□ 0.282e-10■■□□□ 12.2
XRCC6P12956 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC16.19■□□□□ 0.182e-10■■□□□ 12.2
XRCC6P12956 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC15.5■□□□□ 0.072e-10■■□□□ 12.2
XRCC6P12956 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC15.44■□□□□ 0.062e-10■■□□□ 12.2
XRCC6P12956 MSH6-204ENST00000445503 4158 ntTSL 1 (best)14.73□□□□□ -0.052e-10■■□□□ 12.2
XRCC6P12956 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.42e-10■■□□□ 12.2
XRCC6P12956 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.71□□□□□ -1.182e-10■■□□□ 12.2
XRCC6P12956 TMC6-211ENST00000589271 1099 ntTSL 519.21■□□□□ 0.671e-6■■□□□ 12.2
XRCC6P12956 EHBP1-217ENST00000472809 1374 ntTSL 510.52□□□□□ -0.738e-10■■□□□ 12.2
XRCC6P12956 EHBP1-208ENST00000427809 581 ntTSL 46.82□□□□□ -1.328e-10■■□□□ 12.2
XRCC6P12956 TFRC-211ENST00000475593 875 ntTSL 36.32□□□□□ -1.43e-15■■□□□ 12.2
XRCC6P12956 TFRC-214ENST00000483983 757 ntTSL 26.21□□□□□ -1.423e-15■■□□□ 12.2
XRCC6P12956 ACSM3-203ENST00000501740 839 ntTSL 515.52■□□□□ 0.083e-6■■□□□ 12.1
XRCC6P12956 ACSM3-213ENST00000568235 558 ntTSL 413.43□□□□□ -0.263e-6■■□□□ 12.1
XRCC6P12956 ACSM3-205ENST00000561584 561 ntTSL 412.98□□□□□ -0.333e-6■■□□□ 12.1
XRCC6P12956 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC18.34■□□□□ 0.531e-6■■□□□ 12.1
XRCC6P12956 C22orf34-205ENST00000416411 542 ntTSL 415.49■□□□□ 0.071e-6■■□□□ 12.1
XRCC6P12956 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)23.36■■□□□ 1.331e-9■■□□□ 12.1
XRCC6P12956 SPPL2B-208ENST00000612623 495 ntTSL 518.57■□□□□ 0.569e-7■■□□□ 12.1
XRCC6P12956 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.172e-19■■□□□ 12.1
XRCC6P12956 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.922e-19■■□□□ 12.1
XRCC6P12956 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.842e-19■■□□□ 12.1
XRCC6P12956 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.762e-19■■□□□ 12.1
XRCC6P12956 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.712e-19■■□□□ 12.1
XRCC6P12956 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.712e-19■■□□□ 12.1
XRCC6P12956 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.032e-19■■□□□ 12.1
XRCC6P12956 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.032e-19■■□□□ 12.1
XRCC6P12956 USP48-214ENST00000532737 680 ntTSL 427.72■■■□□ 2.037e-11■■□□□ 12.1
XRCC6P12956 USP48-205ENST00000421625 2818 ntTSL 2 BASIC27.1■■□□□ 1.937e-11■■□□□ 12.1
XRCC6P12956 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.327e-11■■□□□ 12.1
XRCC6P12956 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.23■■□□□ 1.157e-11■■□□□ 12.1
XRCC6P12956 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC18.19■□□□□ 0.57e-11■■□□□ 12.1
XRCC6P12956 USP48-212ENST00000527823 554 ntTSL 48.75□□□□□ -1.017e-11■■□□□ 12.1
XRCC6P12956 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.774e-8■■□□□ 12.1
XRCC6P12956 PTDSS2-212ENST00000531520 890 ntTSL 320.91■□□□□ 0.944e-8■■□□□ 12.1
XRCC6P12956 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.694e-8■■□□□ 12.1
XRCC6P12956 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.284e-8■■□□□ 12.1
XRCC6P12956 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC16.06■□□□□ 0.164e-8■■□□□ 12.1
XRCC6P12956 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC15.53■□□□□ 0.084e-8■■□□□ 12.1
XRCC6P12956 PTDSS2-205ENST00000526878 3134 ntTSL 214.84□□□□□ -0.034e-8■■□□□ 12.1
XRCC6P12956 PTDSS2-213ENST00000532614 437 ntTSL 314.83□□□□□ -0.044e-8■■□□□ 12.1
XRCC6P12956 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC13.88□□□□□ -0.194e-8■■□□□ 12.1
XRCC6P12956 PPP1R8-204ENST00000431586 1029 ntTSL 313.74□□□□□ -0.214e-8■■□□□ 12.1
XRCC6P12956 ARHGAP12-202ENST00000344936 4128 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.264e-8■■□□□ 12.1
XRCC6P12956 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.274e-8■■□□□ 12.1
XRCC6P12956 RPS6KA3-206ENST00000492128 553 ntTSL 49.9□□□□□ -0.824e-8■■□□□ 12.1
XRCC6P12956 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC9.65□□□□□ -0.864e-8■■□□□ 12.1
XRCC6P12956 SCARNA1-201ENST00000517138 166 ntBASIC6.4□□□□□ -1.384e-8■■□□□ 12.1
XRCC6P12956 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.81□□□□□ -1.84e-8■■□□□ 12.1
XRCC6P12956 SIPA1L1-210ENST00000555652 379 ntTSL 326.18■■□□□ 1.781e-18■■□□□ 12.1
XRCC6P12956 SIPA1L1-212ENST00000555989 569 ntTSL 421.62■■□□□ 1.051e-18■■□□□ 12.1
XRCC6P12956 SIPA1L1-204ENST00000553453 521 ntTSL 521.41■■□□□ 1.021e-18■■□□□ 12.1
XRCC6P12956 SIPA1L1-214ENST00000556780 591 ntTSL 520.96■□□□□ 0.951e-18■■□□□ 12.1
XRCC6P12956 SIPA1L1-216ENST00000557151 744 ntTSL 318.21■□□□□ 0.511e-18■■□□□ 12.1
XRCC6P12956 SIPA1L1-213ENST00000556408 903 ntTSL 310.17□□□□□ -0.781e-18■■□□□ 12.1
XRCC6P12956 SIPA1L1-206ENST00000554362 552 ntTSL 53.67□□□□□ -1.821e-18■■□□□ 12.1
XRCC6P12956 SIPA1L1-205ENST00000554126 576 ntTSL 51.83□□□□□ -2.121e-18■■□□□ 12.1
XRCC6P12956 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.831e-9■■□□□ 12
XRCC6P12956 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.111e-9■■□□□ 12
XRCC6P12956 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.121e-9■■□□□ 12
XRCC6P12956 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.21e-9■■□□□ 12
XRCC6P12956 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.411e-9■■□□□ 12
XRCC6P12956 ZC3H11A-213ENST00000638800 7078 ntTSL 56.21□□□□□ -1.421e-9■■□□□ 12
XRCC6P12956 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.691e-9■■□□□ 12
XRCC6P12956 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.16□□□□□ -1.422e-11■■□□□ 12
XRCC6P12956 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.447e-6■■□□□ 12
XRCC6P12956 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.45e-10■■□□□ 12
XRCC6P12956 RHOT2-222ENST00000569675 2559 ntTSL 222.19■■□□□ 1.145e-10■■□□□ 12
Retrieved 100 of 6,788 protein–RNA pairs in 45.3 ms