RNA–Protein interactions for RNA: ENST00000323456.9

MTMR4-201, Transcript of myotubularin related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTMR4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-201ENST00000323456 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
MTMR4-201ENST00000323456 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
MTMR4-201ENST00000323456 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.4
MTMR4-201ENST00000323456 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
MTMR4-201ENST00000323456 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
MTMR4-201ENST00000323456 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
MTMR4-201ENST00000323456 TTBK1Q5TCY1 1321 aaPredicted RBP16.32■□□□□ 0.2
MTMR4-201ENST00000323456 PCGF6Q9BYE7 350 aa16.31■□□□□ 0.2
MTMR4-201ENST00000323456 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
MTMR4-201ENST00000323456 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
MTMR4-201ENST00000323456 APLP2Q06481 763 aa16.07■□□□□ 0.16
MTMR4-201ENST00000323456 PPARGC1BQ86YN6 1023 aaKnown RBP15.9■□□□□ 0.14
MTMR4-201ENST00000323456 UBTFP17480 764 aaKnown RBP15.82■□□□□ 0.12
MTMR4-201ENST00000323456 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
MTMR4-201ENST00000323456 LOC105371045A0A1W2PR82 267 aa15.79■□□□□ 0.12
MTMR4-201ENST00000323456 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
MTMR4-201ENST00000323456 ATP1B4Q9UN42 357 aaPredicted RBP15.74■□□□□ 0.11
MTMR4-201ENST00000323456 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
MTMR4-201ENST00000323456 PELP1Q8IZL8 1130 aaKnown RBP15.69■□□□□ 0.1
MTMR4-201ENST00000323456 ABCC9O60706 1549 aa15.64■□□□□ 0.09
MTMR4-201ENST00000323456 TRIM26Q12899 539 aaPredicted RBP15.62■□□□□ 0.09
MTMR4-201ENST00000323456 HRCP23327 699 aa15.55■□□□□ 0.08
MTMR4-201ENST00000323456 YTHDC1Q96MU7 727 aaKnown RBP15.51■□□□□ 0.07
MTMR4-201ENST00000323456 CENPBP07199 599 aaPredicted RBP15.47■□□□□ 0.07
MTMR4-201ENST00000323456 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
MTMR4-201ENST00000323456 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
MTMR4-201ENST00000323456 ITGAEP38570 1179 aa15.37■□□□□ 0.05
MTMR4-201ENST00000323456 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
MTMR4-201ENST00000323456 HNRNPUL2Q1KMD3 747 aaKnown RBP15.33■□□□□ 0.04
MTMR4-201ENST00000323456 CCDC180Q9P1Z9 1646 aa15.28■□□□□ 0.04
MTMR4-201ENST00000323456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
MTMR4-201ENST00000323456 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
MTMR4-201ENST00000323456 NEFLP07196 543 aa15.03■□□□□ -0
MTMR4-201ENST00000323456 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
MTMR4-201ENST00000323456 MYO15BQ96JP2 1530 aa15□□□□□ -0.01
MTMR4-201ENST00000323456 FAM50AQ14320 339 aaKnown RBP15□□□□□ -0.01
MTMR4-201ENST00000323456 DIEXFQ68CQ4 756 aaKnown RBP14.99□□□□□ -0.01
MTMR4-201ENST00000323456 CNGB1Q14028 1251 aaPredicted RBP14.97□□□□□ -0.01
MTMR4-201ENST00000323456 MYT1LQ9UL68 1186 aa14.9□□□□□ -0.02
MTMR4-201ENST00000323456 NEUROD1Q13562 356 aa14.88□□□□□ -0.03
MTMR4-201ENST00000323456 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.03
MTMR4-201ENST00000323456 P3H3Q8IVL6 736 aa14.83□□□□□ -0.03
MTMR4-201ENST00000323456 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
MTMR4-201ENST00000323456 TRIM52Q96A61 297 aa14.79□□□□□ -0.04
MTMR4-201ENST00000323456 ARID3CA6NKF2 412 aa14.76□□□□□ -0.05
MTMR4-201ENST00000323456 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
MTMR4-201ENST00000323456 RB1CC1Q8TDY2 1594 aa14.74□□□□□ -0.05
MTMR4-201ENST00000323456 FBLN2P98095 1184 aa14.69□□□□□ -0.06
MTMR4-201ENST00000323456 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
MTMR4-201ENST00000323456 ZNF316A6NFI3 1004 aaPredicted RBP14.68□□□□□ -0.06
MTMR4-201ENST00000323456 BCANQ96GW7 911 aa14.64□□□□□ -0.07
MTMR4-201ENST00000323456 ZNF326Q5BKZ1 582 aaKnown RBP14.63□□□□□ -0.07
MTMR4-201ENST00000323456 NACADO15069 1562 aa14.62□□□□□ -0.07
MTMR4-201ENST00000323456 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
MTMR4-201ENST00000323456 ANP32CO43423 234 aa14.53□□□□□ -0.08
MTMR4-201ENST00000323456 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
MTMR4-201ENST00000323456 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
MTMR4-201ENST00000323456 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
MTMR4-201ENST00000323456 CEP162Q5TB80 1403 aa14.48□□□□□ -0.09
MTMR4-201ENST00000323456 CLIP1P30622 1438 aa14.46□□□□□ -0.1
MTMR4-201ENST00000323456 MYT1Q01538 1121 aa14.45□□□□□ -0.1
MTMR4-201ENST00000323456 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
MTMR4-201ENST00000323456 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
MTMR4-201ENST00000323456 DAXXQ9UER7 740 aaPredicted RBP14.44□□□□□ -0.1
MTMR4-201ENST00000323456 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
MTMR4-201ENST00000323456 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
MTMR4-201ENST00000323456 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
MTMR4-201ENST00000323456 CHIC2Q9UKJ5 165 aa14.38□□□□□ -0.11
MTMR4-201ENST00000323456 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
MTMR4-201ENST00000323456 WIZO95785 1651 aa14.35□□□□□ -0.11
MTMR4-201ENST00000323456 TONSLQ96HA7 1378 aa14.33□□□□□ -0.11
MTMR4-201ENST00000323456 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
MTMR4-201ENST00000323456 SOGA1O94964 1423 aa14.31□□□□□ -0.12
MTMR4-201ENST00000323456 EEA1Q15075 1411 aa14.29□□□□□ -0.12
MTMR4-201ENST00000323456 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
MTMR4-201ENST00000323456 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
MTMR4-201ENST00000323456 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
MTMR4-201ENST00000323456 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
MTMR4-201ENST00000323456 CLSPNQ9HAW4 1339 aa14.27□□□□□ -0.13
MTMR4-201ENST00000323456 MIER1Q8N108 512 aa14.27□□□□□ -0.13
MTMR4-201ENST00000323456 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
MTMR4-201ENST00000323456 CDK11AQ9UQ88 783 aaPredicted RBP14.26□□□□□ -0.13
MTMR4-201ENST00000323456 MTUS2Q5JR59 1369 aa14.24□□□□□ -0.13
MTMR4-201ENST00000323456 FKBP8Q14318 412 aa14.23□□□□□ -0.13
MTMR4-201ENST00000323456 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
MTMR4-201ENST00000323456 RRP7BPQ9NSQ0 103 aa14.2□□□□□ -0.14
MTMR4-201ENST00000323456 FAM9BQ8IZU0 186 aa14.19□□□□□ -0.14
MTMR4-201ENST00000323456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■□□ 18.4
MTMR4-201ENST00000323456 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
MTMR4-201ENST00000323456 HNRNPUQ00839 825 aaKnown RBP eCLIP14.16□□□□□ -0.14
MTMR4-201ENST00000323456 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
MTMR4-201ENST00000323456 CHMP7Q8WUX9 453 aaPredicted RBP14.14□□□□□ -0.15
MTMR4-201ENST00000323456 CANXP27824 592 aaKnown RBP14.12□□□□□ -0.15
MTMR4-201ENST00000323456 KDM2AQ9Y2K7 1162 aa14.12□□□□□ -0.15
MTMR4-201ENST00000323456 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
MTMR4-201ENST00000323456 SALL2Q9Y467 1007 aaPredicted RBP14.11□□□□□ -0.15
MTMR4-201ENST00000323456 CHGAP10645 457 aaKnown RBP14.1□□□□□ -0.15
MTMR4-201ENST00000323456 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
MTMR4-201ENST00000323456 CUX2O14529 1486 aa14.08□□□□□ -0.16
MTMR4-201ENST00000323456 IRX6P78412 446 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms