RNA–Protein interactions for RNA: ENST00000379932.8

BRF1-202, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-202ENST00000379932 NISCHQ9Y2I1 1504 aa37.17■■■■□ 3.54
BRF1-202ENST00000379932 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
BRF1-202ENST00000379932 ABCC9O60706 1549 aa32.1■■■□□ 2.73
BRF1-202ENST00000379932 NACADO15069 1562 aa31.07■■■□□ 2.56
BRF1-202ENST00000379932 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
BRF1-202ENST00000379932 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
BRF1-202ENST00000379932 ZCCHC6Q5VYS8 1495 aaKnown RBP31■■■□□ 2.55
BRF1-202ENST00000379932 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
BRF1-202ENST00000379932 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
BRF1-202ENST00000379932 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
BRF1-202ENST00000379932 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
BRF1-202ENST00000379932 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
BRF1-202ENST00000379932 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
BRF1-202ENST00000379932 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
BRF1-202ENST00000379932 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.39
BRF1-202ENST00000379932 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
BRF1-202ENST00000379932 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
BRF1-202ENST00000379932 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
BRF1-202ENST00000379932 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
BRF1-202ENST00000379932 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
BRF1-202ENST00000379932 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
BRF1-202ENST00000379932 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
BRF1-202ENST00000379932 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
BRF1-202ENST00000379932 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
BRF1-202ENST00000379932 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
BRF1-202ENST00000379932 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
BRF1-202ENST00000379932 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
BRF1-202ENST00000379932 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
BRF1-202ENST00000379932 WIZO95785 1651 aa28.23■■■□□ 2.11
BRF1-202ENST00000379932 DNAJC5Q9H3Z4 198 aa28.2■■■□□ 2.1
BRF1-202ENST00000379932 TOP2AP11388 1531 aaKnown RBP28.05■■■□□ 2.08
BRF1-202ENST00000379932 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
BRF1-202ENST00000379932 CADPSQ9ULU8 1353 aa27.81■■■□□ 2.04
BRF1-202ENST00000379932 NESP48681 1621 aa27.79■■■□□ 2.04
BRF1-202ENST00000379932 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
BRF1-202ENST00000379932 PDS5BQ9NTI5 1447 aa27.7■■■□□ 2.03
BRF1-202ENST00000379932 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
BRF1-202ENST00000379932 CFTRP13569 1480 aa27.68■■■□□ 2.02
BRF1-202ENST00000379932 CUX2O14529 1486 aa27.66■■■□□ 2.02
BRF1-202ENST00000379932 SUPT5HO00267 1087 aaKnown RBP27.54■■■□□ 2
BRF1-202ENST00000379932 KIF21AQ7Z4S6 1674 aa27.47■■□□□ 1.99
BRF1-202ENST00000379932 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
BRF1-202ENST00000379932 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
BRF1-202ENST00000379932 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
BRF1-202ENST00000379932 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
BRF1-202ENST00000379932 MRC2Q9UBG0 1479 aa27.38■■□□□ 1.97
BRF1-202ENST00000379932 WDR62O43379 1518 aa27.29■■□□□ 1.96
BRF1-202ENST00000379932 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
BRF1-202ENST00000379932 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
BRF1-202ENST00000379932 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
BRF1-202ENST00000379932 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
BRF1-202ENST00000379932 IFT140Q96RY7 1462 aa26.88■■□□□ 1.89
BRF1-202ENST00000379932 CUX1P39880 1505 aa26.82■■□□□ 1.88
BRF1-202ENST00000379932 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
BRF1-202ENST00000379932 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
BRF1-202ENST00000379932 FGD5Q6ZNL6 1462 aa26.73■■□□□ 1.87
BRF1-202ENST00000379932 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
BRF1-202ENST00000379932 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
BRF1-202ENST00000379932 SOGA1O94964 1423 aa26.69■■□□□ 1.86
BRF1-202ENST00000379932 TOP2BQ02880 1626 aa26.66■■□□□ 1.86
BRF1-202ENST00000379932 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
BRF1-202ENST00000379932 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
BRF1-202ENST00000379932 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
BRF1-202ENST00000379932 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
BRF1-202ENST00000379932 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
BRF1-202ENST00000379932 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
BRF1-202ENST00000379932 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
BRF1-202ENST00000379932 AQRO60306 1485 aaKnown RBP eCLIP26.51■■□□□ 1.834e-7■■■■■ 29.9
BRF1-202ENST00000379932 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
BRF1-202ENST00000379932 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
BRF1-202ENST00000379932 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
BRF1-202ENST00000379932 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.81
BRF1-202ENST00000379932 OSCARQ8IYS5 282 aa26.36■■□□□ 1.81
BRF1-202ENST00000379932 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
BRF1-202ENST00000379932 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
BRF1-202ENST00000379932 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
BRF1-202ENST00000379932 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
BRF1-202ENST00000379932 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
BRF1-202ENST00000379932 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
BRF1-202ENST00000379932 CHD1O14646 1710 aa26.17■■□□□ 1.78
BRF1-202ENST00000379932 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
BRF1-202ENST00000379932 FBLN2P98095 1184 aa26.13■■□□□ 1.77
BRF1-202ENST00000379932 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
BRF1-202ENST00000379932 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
BRF1-202ENST00000379932 IGF1RP08069 1367 aa26.05■■□□□ 1.76
BRF1-202ENST00000379932 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
BRF1-202ENST00000379932 CUL7Q14999 1698 aa25.99■■□□□ 1.75
BRF1-202ENST00000379932 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
BRF1-202ENST00000379932 NUP160Q12769 1436 aa25.96■■□□□ 1.75
BRF1-202ENST00000379932 RIMBP3CA6NJZ7 1639 aa25.95■■□□□ 1.74
BRF1-202ENST00000379932 RIMBP3BA6NNM3 1639 aa25.95■■□□□ 1.74
BRF1-202ENST00000379932 RIMBP3Q9UFD9 1639 aa25.95■■□□□ 1.74
BRF1-202ENST00000379932 CARMIL1Q5VZK9 1371 aa25.88■■□□□ 1.73
BRF1-202ENST00000379932 ARHGEF11O15085 1522 aa25.86■■□□□ 1.73
BRF1-202ENST00000379932 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
BRF1-202ENST00000379932 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
BRF1-202ENST00000379932 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.72
BRF1-202ENST00000379932 EEA1Q15075 1411 aa25.8■■□□□ 1.72
BRF1-202ENST00000379932 RAPGEF2Q9Y4G8 1499 aa25.76■■□□□ 1.71
BRF1-202ENST00000379932 CYB5RLQ6IPT4 315 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms