RNA–Protein interactions for RNA: ENST00000308020.5

PTDSS2-201, Transcript of phosphatidylserine synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTDSS2, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS2-201ENST00000308020 NISCHQ9Y2I1 1504 aa43.92■■■■■ 4.62
PTDSS2-201ENST00000308020 CCDC180Q9P1Z9 1646 aa37.46■■■■□ 3.59
PTDSS2-201ENST00000308020 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.55
PTDSS2-201ENST00000308020 ZCCHC6Q5VYS8 1495 aaKnown RBP37.08■■■■□ 3.53
PTDSS2-201ENST00000308020 DCAF8L2P0C7V8 631 aa36.62■■■■□ 3.45
PTDSS2-201ENST00000308020 SUPT5HO00267 1087 aaKnown RBP36.42■■■■□ 3.42
PTDSS2-201ENST00000308020 DCAF1Q9Y4B6 1507 aa36.02■■■■□ 3.36
PTDSS2-201ENST00000308020 CHIC1Q5VXU3 224 aa35.36■■■■□ 3.25
PTDSS2-201ENST00000308020 MYO15BQ96JP2 1530 aa35.25■■■■□ 3.23
PTDSS2-201ENST00000308020 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
PTDSS2-201ENST00000308020 ABCC9O60706 1549 aa35.03■■■■□ 3.2
PTDSS2-201ENST00000308020 NACADO15069 1562 aa34.74■■■■□ 3.15
PTDSS2-201ENST00000308020 RSF1Q96T23 1441 aaPredicted RBP34.65■■■■□ 3.14
PTDSS2-201ENST00000308020 HRCP23327 699 aa34.49■■■■□ 3.11
PTDSS2-201ENST00000308020 PCGF6Q9BYE7 350 aa34.43■■■■□ 3.1
PTDSS2-201ENST00000308020 LOC105371045A0A1W2PR82 267 aa34.36■■■■□ 3.09
PTDSS2-201ENST00000308020 CECR2Q9BXF3 1484 aa34.3■■■■□ 3.08
PTDSS2-201ENST00000308020 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
PTDSS2-201ENST00000308020 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
PTDSS2-201ENST00000308020 TRIM41Q8WV44 630 aa33.95■■■■□ 3.03
PTDSS2-201ENST00000308020 WIZO95785 1651 aa33.94■■■■□ 3.02
PTDSS2-201ENST00000308020 PPARGC1BQ86YN6 1023 aaKnown RBP33.8■■■■□ 3
PTDSS2-201ENST00000308020 BAZ1AQ9NRL2 1556 aaPredicted RBP33.76■■■■□ 3
PTDSS2-201ENST00000308020 UNC13AQ9UPW8 1703 aa33.71■■■□□ 2.99
PTDSS2-201ENST00000308020 TRIM26Q12899 539 aaPredicted RBP33.7■■■□□ 2.99
PTDSS2-201ENST00000308020 FAM9AQ8IZU1 332 aaPredicted RBP33.66■■■□□ 2.98
PTDSS2-201ENST00000308020 SMARCA4P51532 1647 aa33.51■■■□□ 2.95
PTDSS2-201ENST00000308020 PABPN1Q86U42 306 aaKnown RBP eCLIP33.48■■■□□ 2.95
PTDSS2-201ENST00000308020 EHMT2Q96KQ7 1210 aa33.4■■■□□ 2.94
PTDSS2-201ENST00000308020 TOP2AP11388 1531 aaKnown RBP33.39■■■□□ 2.94
PTDSS2-201ENST00000308020 BICRAQ9NZM4 1560 aa33.31■■■□□ 2.92
PTDSS2-201ENST00000308020 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
PTDSS2-201ENST00000308020 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.92
PTDSS2-201ENST00000308020 SMARCA2P51531 1590 aa33.2■■■□□ 2.91
PTDSS2-201ENST00000308020 ABCC8Q09428 1581 aa33.07■■■□□ 2.88
PTDSS2-201ENST00000308020 ZEB1P37275 1124 aaPredicted RBP32.99■■■□□ 2.87
PTDSS2-201ENST00000308020 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
PTDSS2-201ENST00000308020 ATAD2BQ9ULI0 1458 aa32.75■■■□□ 2.83
PTDSS2-201ENST00000308020 SOGA1O94964 1423 aa32.71■■■□□ 2.83
PTDSS2-201ENST00000308020 BAZ1BQ9UIG0 1483 aaKnown RBP32.65■■■□□ 2.82
PTDSS2-201ENST00000308020 WRNQ14191 1432 aaPredicted RBP eCLIP32.57■■■□□ 2.8
PTDSS2-201ENST00000308020 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
PTDSS2-201ENST00000308020 CSRNP3Q8WYN3 585 aa32.53■■■□□ 2.8
PTDSS2-201ENST00000308020 EEA1Q15075 1411 aa32.47■■■□□ 2.79
PTDSS2-201ENST00000308020 UBTFP17480 764 aaKnown RBP32.4■■■□□ 2.78
PTDSS2-201ENST00000308020 CEP162Q5TB80 1403 aa32.4■■■□□ 2.78
PTDSS2-201ENST00000308020 SYNJ1O43426 1573 aa32.39■■■□□ 2.78
PTDSS2-201ENST00000308020 TNIKQ9UKE5 1360 aa32.38■■■□□ 2.77
PTDSS2-201ENST00000308020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.38■■■□□ 2.77
PTDSS2-201ENST00000308020 TTBK1Q5TCY1 1321 aaPredicted RBP32.29■■■□□ 2.76
PTDSS2-201ENST00000308020 CCER1Q8TC90 406 aaPredicted RBP32.29■■■□□ 2.76
PTDSS2-201ENST00000308020 GOLGA3Q08378 1498 aa32.24■■■□□ 2.75
PTDSS2-201ENST00000308020 NCAPD3P42695 1498 aa32.16■■■□□ 2.74
PTDSS2-201ENST00000308020 HMGXB3Q12766 1538 aa32.11■■■□□ 2.73
PTDSS2-201ENST00000308020 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
PTDSS2-201ENST00000308020 TOP2BQ02880 1626 aa32.03■■■□□ 2.72
PTDSS2-201ENST00000308020 KIF21BO75037 1637 aa32.02■■■□□ 2.72
PTDSS2-201ENST00000308020 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
PTDSS2-201ENST00000308020 BIVM-ERCC5R4GMW8 1640 aa31.89■■■□□ 2.7
PTDSS2-201ENST00000308020 CLIP1P30622 1438 aa31.88■■■□□ 2.69
PTDSS2-201ENST00000308020 SCAF1Q9H7N4 1312 aaKnown RBP31.86■■■□□ 2.69
PTDSS2-201ENST00000308020 RANGAP1P46060 587 aaPredicted RBP31.86■■■□□ 2.69
PTDSS2-201ENST00000308020 CFTRP13569 1480 aa31.83■■■□□ 2.69
PTDSS2-201ENST00000308020 CUX1P39880 1505 aa31.79■■■□□ 2.68
PTDSS2-201ENST00000308020 DIEXFQ68CQ4 756 aaKnown RBP31.71■■■□□ 2.67
PTDSS2-201ENST00000308020 VPS8Q8N3P4 1428 aa31.68■■■□□ 2.66
PTDSS2-201ENST00000308020 PRXQ9BXM0 1461 aa31.64■■■□□ 2.66
PTDSS2-201ENST00000308020 APLP2Q06481 763 aa31.61■■■□□ 2.65
PTDSS2-201ENST00000308020 KIF27Q86VH2 1401 aa31.6■■■□□ 2.65
PTDSS2-201ENST00000308020 ERICH3Q5RHP9 1530 aa31.58■■■□□ 2.65
PTDSS2-201ENST00000308020 HNRNPUL2Q1KMD3 747 aaKnown RBP31.58■■■□□ 2.65
PTDSS2-201ENST00000308020 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
PTDSS2-201ENST00000308020 CC2D2AQ9P2K1 1620 aa31.53■■■□□ 2.64
PTDSS2-201ENST00000308020 ACIN1Q9UKV3 1341 aaKnown RBP31.51■■■□□ 2.64
PTDSS2-201ENST00000308020 PRDM2Q13029 1718 aa31.5■■■□□ 2.63
PTDSS2-201ENST00000308020 NEUROD1Q13562 356 aa31.48■■■□□ 2.63
PTDSS2-201ENST00000308020 ZNF316A6NFI3 1004 aaPredicted RBP31.43■■■□□ 2.62
PTDSS2-201ENST00000308020 ARAP1Q96P48 1450 aa31.37■■■□□ 2.61
PTDSS2-201ENST00000308020 CUX2O14529 1486 aa31.36■■■□□ 2.61
PTDSS2-201ENST00000308020 CENPBP07199 599 aaPredicted RBP31.3■■■□□ 2.6
PTDSS2-201ENST00000308020 FGD5Q6ZNL6 1462 aa31.29■■■□□ 2.6
PTDSS2-201ENST00000308020 IGF1RP08069 1367 aa31.29■■■□□ 2.6
PTDSS2-201ENST00000308020 FANCD2Q9BXW9 1451 aa31.24■■■□□ 2.59
PTDSS2-201ENST00000308020 PELP1Q8IZL8 1130 aaKnown RBP31.24■■■□□ 2.59
PTDSS2-201ENST00000308020 KANK4Q5T7N3 995 aaPredicted RBP31.22■■■□□ 2.59
PTDSS2-201ENST00000308020 ARHGAP35Q9NRY4 1499 aa31.18■■■□□ 2.58
PTDSS2-201ENST00000308020 GTF3C3Q9Y5Q9 886 aa31.17■■■□□ 2.58
PTDSS2-201ENST00000308020 CARMIL1Q5VZK9 1371 aa31.16■■■□□ 2.58
PTDSS2-201ENST00000308020 NESP48681 1621 aa31.12■■■□□ 2.57
PTDSS2-201ENST00000308020 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
PTDSS2-201ENST00000308020 MIER1Q8N108 512 aa31.03■■■□□ 2.56
PTDSS2-201ENST00000308020 DNMBPQ6XZF7 1577 aa31.01■■■□□ 2.55
PTDSS2-201ENST00000308020 YTHDC1Q96MU7 727 aaKnown RBP31■■■□□ 2.55
PTDSS2-201ENST00000308020 TOPBP1Q92547 1522 aa30.99■■■□□ 2.55
PTDSS2-201ENST00000308020 POLA1P09884 1462 aaPredicted RBP30.97■■■□□ 2.55
PTDSS2-201ENST00000308020 DHX57Q6P158 1386 aaKnown RBP30.93■■■□□ 2.54
PTDSS2-201ENST00000308020 ABCA10Q8WWZ4 1543 aa30.91■■■□□ 2.54
PTDSS2-201ENST00000308020 RRBP1Q9P2E9 1410 aaKnown RBP30.89■■■□□ 2.54
PTDSS2-201ENST00000308020 CLSPNQ9HAW4 1339 aa30.89■■■□□ 2.54
PTDSS2-201ENST00000308020 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms