RNA–Protein interactions for RNA: ENST00000531520.5

PTDSS2-212, Transcript of phosphatidylserine synthase 2, humanhuman

TSL 3

Gene PTDSS2, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS2-212ENST00000531520 NISCHQ9Y2I1 1504 aa46.21■■■■■ 4.99
PTDSS2-212ENST00000531520 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
PTDSS2-212ENST00000531520 ABCC9O60706 1549 aa40.67■■■■■ 4.1
PTDSS2-212ENST00000531520 RB1CC1Q8TDY2 1594 aa38.91■■■■□ 3.82
PTDSS2-212ENST00000531520 NACADO15069 1562 aa38.79■■■■□ 3.8
PTDSS2-212ENST00000531520 DCAF8L2P0C7V8 631 aa38.78■■■■□ 3.8
PTDSS2-212ENST00000531520 MYO15BQ96JP2 1530 aa38.45■■■■□ 3.75
PTDSS2-212ENST00000531520 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
PTDSS2-212ENST00000531520 DCAF1Q9Y4B6 1507 aa38.18■■■■□ 3.7
PTDSS2-212ENST00000531520 UNC13AQ9UPW8 1703 aa38.04■■■■□ 3.68
PTDSS2-212ENST00000531520 PABPN1Q86U42 306 aaKnown RBP eCLIP37.99■■■■□ 3.67
PTDSS2-212ENST00000531520 BICRAQ9NZM4 1560 aa37.81■■■■□ 3.64
PTDSS2-212ENST00000531520 DNAJC5BQ9UF47 199 aa37.69■■■■□ 3.62
PTDSS2-212ENST00000531520 SCRIBQ14160 1630 aa37.59■■■■□ 3.61
PTDSS2-212ENST00000531520 SHROOM4Q9ULL8 1493 aa37.28■■■■□ 3.56
PTDSS2-212ENST00000531520 EIF4G1Q04637 1599 aaKnown RBP36.82■■■■□ 3.48
PTDSS2-212ENST00000531520 CC2D2AQ9P2K1 1620 aa36.74■■■■□ 3.47
PTDSS2-212ENST00000531520 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
PTDSS2-212ENST00000531520 SMARCA4P51532 1647 aa35.91■■■■□ 3.34
PTDSS2-212ENST00000531520 NCAPD3P42695 1498 aa35.84■■■■□ 3.33
PTDSS2-212ENST00000531520 ATAD2BQ9ULI0 1458 aa35.82■■■■□ 3.32
PTDSS2-212ENST00000531520 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
PTDSS2-212ENST00000531520 SMARCA2P51531 1590 aa35.71■■■■□ 3.31
PTDSS2-212ENST00000531520 MROH2BQ7Z745 1585 aa35.64■■■■□ 3.3
PTDSS2-212ENST00000531520 HMGXB3Q12766 1538 aa35.6■■■■□ 3.29
PTDSS2-212ENST00000531520 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
PTDSS2-212ENST00000531520 BAZ1BQ9UIG0 1483 aaKnown RBP35.48■■■■□ 3.27
PTDSS2-212ENST00000531520 WIZO95785 1651 aa35.23■■■■□ 3.23
PTDSS2-212ENST00000531520 NESP48681 1621 aa35.12■■■■□ 3.21
PTDSS2-212ENST00000531520 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
PTDSS2-212ENST00000531520 ERCC6Q03468 1493 aa35.03■■■■□ 3.2
PTDSS2-212ENST00000531520 LAMC3Q9Y6N6 1575 aa34.91■■■■□ 3.18
PTDSS2-212ENST00000531520 TOP2AP11388 1531 aaKnown RBP34.8■■■■□ 3.16
PTDSS2-212ENST00000531520 CADPSQ9ULU8 1353 aa34.78■■■■□ 3.16
PTDSS2-212ENST00000531520 CUX2O14529 1486 aa34.77■■■■□ 3.16
PTDSS2-212ENST00000531520 PDS5BQ9NTI5 1447 aa34.7■■■■□ 3.15
PTDSS2-212ENST00000531520 KIF21AQ7Z4S6 1674 aa34.64■■■■□ 3.14
PTDSS2-212ENST00000531520 THOC2Q8NI27 1593 aaKnown RBP34.61■■■■□ 3.13
PTDSS2-212ENST00000531520 CFTRP13569 1480 aa34.51■■■■□ 3.11
PTDSS2-212ENST00000531520 CCDC88BA6NC98 1476 aa34.44■■■■□ 3.1
PTDSS2-212ENST00000531520 FANCD2Q9BXW9 1451 aa34.38■■■■□ 3.09
PTDSS2-212ENST00000531520 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
PTDSS2-212ENST00000531520 CEP164Q9UPV0 1460 aa34.34■■■■□ 3.09
PTDSS2-212ENST00000531520 WDR62O43379 1518 aa34.26■■■■□ 3.08
PTDSS2-212ENST00000531520 PRDM2Q13029 1718 aa34.14■■■■□ 3.06
PTDSS2-212ENST00000531520 DNAJC5Q9H3Z4 198 aa34.13■■■■□ 3.05
PTDSS2-212ENST00000531520 URB2Q14146 1524 aaKnown RBP34.08■■■■□ 3.05
PTDSS2-212ENST00000531520 SUPT5HO00267 1087 aaKnown RBP34.01■■■■□ 3.03
PTDSS2-212ENST00000531520 TOPBP1Q92547 1522 aa33.79■■■■□ 3
PTDSS2-212ENST00000531520 ABCC8Q09428 1581 aa33.72■■■□□ 2.99
PTDSS2-212ENST00000531520 DNMBPQ6XZF7 1577 aa33.71■■■□□ 2.99
PTDSS2-212ENST00000531520 IFT140Q96RY7 1462 aa33.63■■■□□ 2.97
PTDSS2-212ENST00000531520 ZNF608Q9ULD9 1512 aaPredicted RBP33.58■■■□□ 2.97
PTDSS2-212ENST00000531520 POLA1P09884 1462 aaPredicted RBP33.5■■■□□ 2.95
PTDSS2-212ENST00000531520 TARBP1Q13395 1621 aaKnown RBP33.46■■■□□ 2.95
PTDSS2-212ENST00000531520 CUX1P39880 1505 aa33.45■■■□□ 2.95
PTDSS2-212ENST00000531520 RAD54L2Q9Y4B4 1467 aa33.38■■■□□ 2.93
PTDSS2-212ENST00000531520 EIF4G3O43432 1585 aaKnown RBP33.38■■■□□ 2.93
PTDSS2-212ENST00000531520 FGD5Q6ZNL6 1462 aa33.37■■■□□ 2.93
PTDSS2-212ENST00000531520 SOGA1O94964 1423 aa33.36■■■□□ 2.93
PTDSS2-212ENST00000531520 AQRO60306 1485 aaKnown RBP eCLIP33.34■■■□□ 2.932e-7■■■■□ 23.2
PTDSS2-212ENST00000531520 OSCARQ8IYS5 282 aa33.3■■■□□ 2.92
PTDSS2-212ENST00000531520 TDRD9Q8NDG6 1382 aaKnown RBP33.23■■■□□ 2.91
PTDSS2-212ENST00000531520 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
PTDSS2-212ENST00000531520 WRNQ14191 1432 aaPredicted RBP eCLIP33.09■■■□□ 2.89
PTDSS2-212ENST00000531520 SYNJ1O43426 1573 aa33.04■■■□□ 2.88
PTDSS2-212ENST00000531520 TOP2BQ02880 1626 aa33.03■■■□□ 2.88
PTDSS2-212ENST00000531520 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
PTDSS2-212ENST00000531520 CHD1O14646 1710 aa33.01■■■□□ 2.87
PTDSS2-212ENST00000531520 ABCA10Q8WWZ4 1543 aa33.01■■■□□ 2.87
PTDSS2-212ENST00000531520 SNAPC4Q5SXM2 1469 aa33■■■□□ 2.87
PTDSS2-212ENST00000531520 FBLN2P98095 1184 aa32.99■■■□□ 2.87
PTDSS2-212ENST00000531520 GRIN2BQ13224 1484 aa32.98■■■□□ 2.87
PTDSS2-212ENST00000531520 GAPVD1Q14C86 1478 aa32.95■■■□□ 2.87
PTDSS2-212ENST00000531520 MAGI1Q96QZ7 1491 aaPredicted RBP32.91■■■□□ 2.86
PTDSS2-212ENST00000531520 ABCA5Q8WWZ7 1642 aa32.9■■■□□ 2.86
PTDSS2-212ENST00000531520 TRIM41Q8WV44 630 aa32.89■■■□□ 2.86
PTDSS2-212ENST00000531520 PBRM1Q86U86 1689 aa32.87■■■□□ 2.85
PTDSS2-212ENST00000531520 CHMP7Q8WUX9 453 aaPredicted RBP32.83■■■□□ 2.85
PTDSS2-212ENST00000531520 SYNJ2O15056 1496 aa32.8■■■□□ 2.84
PTDSS2-212ENST00000531520 RIMBP3CA6NJZ7 1639 aa32.8■■■□□ 2.84
PTDSS2-212ENST00000531520 RIMBP3BA6NNM3 1639 aa32.8■■■□□ 2.84
PTDSS2-212ENST00000531520 RIMBP3Q9UFD9 1639 aa32.8■■■□□ 2.84
PTDSS2-212ENST00000531520 ARHGEF11O15085 1522 aa32.77■■■□□ 2.84
PTDSS2-212ENST00000531520 CLASP1Q7Z460 1538 aa32.67■■■□□ 2.82
PTDSS2-212ENST00000531520 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
PTDSS2-212ENST00000531520 ERICH3Q5RHP9 1530 aa32.6■■■□□ 2.81
PTDSS2-212ENST00000531520 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
PTDSS2-212ENST00000531520 FHAD1B1AJZ9 1412 aa32.55■■■□□ 2.8
PTDSS2-212ENST00000531520 CYB5RLQ6IPT4 315 aa32.51■■■□□ 2.79
PTDSS2-212ENST00000531520 ARAP1Q96P48 1450 aa32.5■■■□□ 2.79
PTDSS2-212ENST00000531520 NUP160Q12769 1436 aa32.44■■■□□ 2.78
PTDSS2-212ENST00000531520 CEP170Q5SW79 1584 aa32.43■■■□□ 2.78
PTDSS2-212ENST00000531520 KIF27Q86VH2 1401 aa32.41■■■□□ 2.78
PTDSS2-212ENST00000531520 IGF1RP08069 1367 aa32.37■■■□□ 2.77
PTDSS2-212ENST00000531520 ERCC6L2Q5T890 1561 aa32.24■■■□□ 2.75
PTDSS2-212ENST00000531520 CUL7Q14999 1698 aa32.21■■■□□ 2.75
PTDSS2-212ENST00000531520 SHROOM2Q13796 1616 aa32.21■■■□□ 2.75
PTDSS2-212ENST00000531520 CARMIL1Q5VZK9 1371 aa32.15■■■□□ 2.74
PTDSS2-212ENST00000531520 RUSC2Q8N2Y8 1516 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms