RNA–Protein interactions for RNA: ENST00000556408.5

SIPA1L1-213, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 3

Gene SIPA1L1, Length 903 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-213ENST00000556408 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
SIPA1L1-213ENST00000556408 ABCC9O60706 1549 aa23.03■■□□□ 1.28
SIPA1L1-213ENST00000556408 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
SIPA1L1-213ENST00000556408 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
SIPA1L1-213ENST00000556408 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
SIPA1L1-213ENST00000556408 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
SIPA1L1-213ENST00000556408 NACADO15069 1562 aa21.35■■□□□ 1.01
SIPA1L1-213ENST00000556408 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
SIPA1L1-213ENST00000556408 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.96
SIPA1L1-213ENST00000556408 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
SIPA1L1-213ENST00000556408 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
SIPA1L1-213ENST00000556408 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
SIPA1L1-213ENST00000556408 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
SIPA1L1-213ENST00000556408 MYO15BQ96JP2 1530 aa20.76■□□□□ 0.91
SIPA1L1-213ENST00000556408 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
SIPA1L1-213ENST00000556408 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
SIPA1L1-213ENST00000556408 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
SIPA1L1-213ENST00000556408 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
SIPA1L1-213ENST00000556408 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
SIPA1L1-213ENST00000556408 CUX2O14529 1486 aa20.2■□□□□ 0.82
SIPA1L1-213ENST00000556408 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
SIPA1L1-213ENST00000556408 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
SIPA1L1-213ENST00000556408 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
SIPA1L1-213ENST00000556408 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
SIPA1L1-213ENST00000556408 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
SIPA1L1-213ENST00000556408 NCAPD3P42695 1498 aa19.6■□□□□ 0.73
SIPA1L1-213ENST00000556408 NESP48681 1621 aa19.55■□□□□ 0.72
SIPA1L1-213ENST00000556408 HMGXB3Q12766 1538 aa19.52■□□□□ 0.72
SIPA1L1-213ENST00000556408 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
SIPA1L1-213ENST00000556408 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
SIPA1L1-213ENST00000556408 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
SIPA1L1-213ENST00000556408 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
SIPA1L1-213ENST00000556408 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
SIPA1L1-213ENST00000556408 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
SIPA1L1-213ENST00000556408 BAZ1BQ9UIG0 1483 aaKnown RBP19.31■□□□□ 0.68
SIPA1L1-213ENST00000556408 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
SIPA1L1-213ENST00000556408 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
SIPA1L1-213ENST00000556408 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
SIPA1L1-213ENST00000556408 WDR62O43379 1518 aa19.15■□□□□ 0.66
SIPA1L1-213ENST00000556408 RIMBP3CA6NJZ7 1639 aa19.04■□□□□ 0.64
SIPA1L1-213ENST00000556408 RIMBP3BA6NNM3 1639 aa19.04■□□□□ 0.64
SIPA1L1-213ENST00000556408 RIMBP3Q9UFD9 1639 aa19.04■□□□□ 0.64
SIPA1L1-213ENST00000556408 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
SIPA1L1-213ENST00000556408 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
SIPA1L1-213ENST00000556408 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
SIPA1L1-213ENST00000556408 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
SIPA1L1-213ENST00000556408 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
SIPA1L1-213ENST00000556408 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
SIPA1L1-213ENST00000556408 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
SIPA1L1-213ENST00000556408 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
SIPA1L1-213ENST00000556408 WIZO95785 1651 aa18.7■□□□□ 0.58
SIPA1L1-213ENST00000556408 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
SIPA1L1-213ENST00000556408 CHD1O14646 1710 aa18.66■□□□□ 0.58
SIPA1L1-213ENST00000556408 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
SIPA1L1-213ENST00000556408 CFTRP13569 1480 aa18.62■□□□□ 0.57
SIPA1L1-213ENST00000556408 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.56
SIPA1L1-213ENST00000556408 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
SIPA1L1-213ENST00000556408 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
SIPA1L1-213ENST00000556408 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
SIPA1L1-213ENST00000556408 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
SIPA1L1-213ENST00000556408 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
SIPA1L1-213ENST00000556408 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
SIPA1L1-213ENST00000556408 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
SIPA1L1-213ENST00000556408 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
SIPA1L1-213ENST00000556408 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
SIPA1L1-213ENST00000556408 FBLN2P98095 1184 aa18.32■□□□□ 0.52
SIPA1L1-213ENST00000556408 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
SIPA1L1-213ENST00000556408 CLASP1Q7Z460 1538 aa18.27■□□□□ 0.51
SIPA1L1-213ENST00000556408 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
SIPA1L1-213ENST00000556408 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
SIPA1L1-213ENST00000556408 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.5
SIPA1L1-213ENST00000556408 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
SIPA1L1-213ENST00000556408 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
SIPA1L1-213ENST00000556408 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
SIPA1L1-213ENST00000556408 MAGI1Q96QZ7 1491 aaPredicted RBP18.09■□□□□ 0.49
SIPA1L1-213ENST00000556408 KIF13AQ9H1H9 1805 aa18.09■□□□□ 0.49
SIPA1L1-213ENST00000556408 PBRM1Q86U86 1689 aa18.08■□□□□ 0.48
SIPA1L1-213ENST00000556408 CHMP7Q8WUX9 453 aaPredicted RBP18.05■□□□□ 0.48
SIPA1L1-213ENST00000556408 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
SIPA1L1-213ENST00000556408 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
SIPA1L1-213ENST00000556408 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
SIPA1L1-213ENST00000556408 SOGA1O94964 1423 aa17.99■□□□□ 0.47
SIPA1L1-213ENST00000556408 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
SIPA1L1-213ENST00000556408 ILDR1Q86SU0 546 aaPredicted RBP17.95■□□□□ 0.46
SIPA1L1-213ENST00000556408 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
SIPA1L1-213ENST00000556408 ERCC6L2Q5T890 1561 aa17.88■□□□□ 0.45
SIPA1L1-213ENST00000556408 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
SIPA1L1-213ENST00000556408 KDM6BO15054 1643 aa17.81■□□□□ 0.44
SIPA1L1-213ENST00000556408 ABCA5Q8WWZ7 1642 aa17.81■□□□□ 0.44
SIPA1L1-213ENST00000556408 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
SIPA1L1-213ENST00000556408 CUX1P39880 1505 aa17.8■□□□□ 0.44
SIPA1L1-213ENST00000556408 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
SIPA1L1-213ENST00000556408 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
SIPA1L1-213ENST00000556408 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
SIPA1L1-213ENST00000556408 DIP2BQ9P265 1576 aa17.72■□□□□ 0.43
SIPA1L1-213ENST00000556408 KDM4FA0A1W2PPD8 638 aa17.69■□□□□ 0.42
SIPA1L1-213ENST00000556408 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
SIPA1L1-213ENST00000556408 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
SIPA1L1-213ENST00000556408 NUP160Q12769 1436 aa17.68■□□□□ 0.42
SIPA1L1-213ENST00000556408 MAPKBP1O60336 1514 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms