RNA–Protein interactions for RNA: ENST00000612623.1

SPPL2B-208, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 5

Gene SPPL2B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-208ENST00000612623 NISCHQ9Y2I1 1504 aa41.32■■■■■ 4.2
SPPL2B-208ENST00000612623 CCDC180Q9P1Z9 1646 aa36.9■■■■□ 3.5
SPPL2B-208ENST00000612623 ABCC9O60706 1549 aa36.87■■■■□ 3.49
SPPL2B-208ENST00000612623 RB1CC1Q8TDY2 1594 aa35.15■■■■□ 3.22
SPPL2B-208ENST00000612623 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
SPPL2B-208ENST00000612623 NACADO15069 1562 aa34.97■■■■□ 3.19
SPPL2B-208ENST00000612623 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
SPPL2B-208ENST00000612623 MYO15BQ96JP2 1530 aa34.57■■■■□ 3.12
SPPL2B-208ENST00000612623 PABPN1Q86U42 306 aaKnown RBP eCLIP34.46■■■■□ 3.11
SPPL2B-208ENST00000612623 ZCCHC6Q5VYS8 1495 aaKnown RBP34.21■■■■□ 3.07
SPPL2B-208ENST00000612623 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
SPPL2B-208ENST00000612623 DCAF1Q9Y4B6 1507 aa34.15■■■■□ 3.06
SPPL2B-208ENST00000612623 BICRAQ9NZM4 1560 aa34.08■■■■□ 3.05
SPPL2B-208ENST00000612623 SHROOM4Q9ULL8 1493 aa33.7■■■□□ 2.99
SPPL2B-208ENST00000612623 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
SPPL2B-208ENST00000612623 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
SPPL2B-208ENST00000612623 EIF4G1Q04637 1599 aaKnown RBP33.25■■■□□ 2.91
SPPL2B-208ENST00000612623 CECR2Q9BXF3 1484 aa33.24■■■□□ 2.91
SPPL2B-208ENST00000612623 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
SPPL2B-208ENST00000612623 ATAD2BQ9ULI0 1458 aa32.23■■■□□ 2.75
SPPL2B-208ENST00000612623 SMARCA4P51532 1647 aa32.12■■■□□ 2.73
SPPL2B-208ENST00000612623 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
SPPL2B-208ENST00000612623 BAZ1AQ9NRL2 1556 aaPredicted RBP32.04■■■□□ 2.72
SPPL2B-208ENST00000612623 HMGXB3Q12766 1538 aa32.01■■■□□ 2.72
SPPL2B-208ENST00000612623 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
SPPL2B-208ENST00000612623 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
SPPL2B-208ENST00000612623 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
SPPL2B-208ENST00000612623 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
SPPL2B-208ENST00000612623 CUX2O14529 1486 aa31.75■■■□□ 2.67
SPPL2B-208ENST00000612623 DNAJC5Q9H3Z4 198 aa31.73■■■□□ 2.67
SPPL2B-208ENST00000612623 NESP48681 1621 aa31.69■■■□□ 2.66
SPPL2B-208ENST00000612623 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.63
SPPL2B-208ENST00000612623 PDS5BQ9NTI5 1447 aa31.42■■■□□ 2.62
SPPL2B-208ENST00000612623 CADPSQ9ULU8 1353 aa31.4■■■□□ 2.62
SPPL2B-208ENST00000612623 WIZO95785 1651 aa31.38■■■□□ 2.61
SPPL2B-208ENST00000612623 RSF1Q96T23 1441 aaPredicted RBP31.27■■■□□ 2.6
SPPL2B-208ENST00000612623 THOC2Q8NI27 1593 aaKnown RBP31.26■■■□□ 2.59
SPPL2B-208ENST00000612623 KIF21AQ7Z4S6 1674 aa31.18■■■□□ 2.58
SPPL2B-208ENST00000612623 MRC2Q9UBG0 1479 aa31.06■■■□□ 2.56
SPPL2B-208ENST00000612623 TOP2AP11388 1531 aaKnown RBP31.02■■■□□ 2.56
SPPL2B-208ENST00000612623 CFTRP13569 1480 aa31.01■■■□□ 2.56
SPPL2B-208ENST00000612623 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.55
SPPL2B-208ENST00000612623 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.55
SPPL2B-208ENST00000612623 WDR62O43379 1518 aa30.93■■■□□ 2.54
SPPL2B-208ENST00000612623 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
SPPL2B-208ENST00000612623 URB2Q14146 1524 aaKnown RBP30.66■■■□□ 2.5
SPPL2B-208ENST00000612623 OSCARQ8IYS5 282 aa30.49■■■□□ 2.47
SPPL2B-208ENST00000612623 PRDM2Q13029 1718 aa30.48■■■□□ 2.47
SPPL2B-208ENST00000612623 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
SPPL2B-208ENST00000612623 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
SPPL2B-208ENST00000612623 TOPBP1Q92547 1522 aa30.37■■■□□ 2.45
SPPL2B-208ENST00000612623 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
SPPL2B-208ENST00000612623 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
SPPL2B-208ENST00000612623 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
SPPL2B-208ENST00000612623 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.43e-7■■■■□ 20
SPPL2B-208ENST00000612623 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
SPPL2B-208ENST00000612623 SUPT5HO00267 1087 aaKnown RBP30.06■■■□□ 2.4
SPPL2B-208ENST00000612623 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
SPPL2B-208ENST00000612623 SOGA1O94964 1423 aa30.02■■■□□ 2.4
SPPL2B-208ENST00000612623 EIF4G3O43432 1585 aaKnown RBP30.01■■■□□ 2.39
SPPL2B-208ENST00000612623 RAD54L2Q9Y4B4 1467 aa29.97■■■□□ 2.39
SPPL2B-208ENST00000612623 TDRD9Q8NDG6 1382 aaKnown RBP29.93■■■□□ 2.38
SPPL2B-208ENST00000612623 FBLN2P98095 1184 aa29.93■■■□□ 2.38
SPPL2B-208ENST00000612623 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
SPPL2B-208ENST00000612623 CUX1P39880 1505 aa29.86■■■□□ 2.37
SPPL2B-208ENST00000612623 RIMBP3CA6NJZ7 1639 aa29.83■■■□□ 2.37
SPPL2B-208ENST00000612623 RIMBP3BA6NNM3 1639 aa29.83■■■□□ 2.37
SPPL2B-208ENST00000612623 RIMBP3Q9UFD9 1639 aa29.83■■■□□ 2.37
SPPL2B-208ENST00000612623 ARHGEF11O15085 1522 aa29.8■■■□□ 2.36
SPPL2B-208ENST00000612623 WDR97A6NE52 1622 aa29.76■■■□□ 2.35
SPPL2B-208ENST00000612623 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
SPPL2B-208ENST00000612623 CYB5RLQ6IPT4 315 aa29.73■■■□□ 2.35
SPPL2B-208ENST00000612623 CHD1O14646 1710 aa29.73■■■□□ 2.35
SPPL2B-208ENST00000612623 GRIN2BQ13224 1484 aa29.7■■■□□ 2.35
SPPL2B-208ENST00000612623 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
SPPL2B-208ENST00000612623 MAGI1Q96QZ7 1491 aaPredicted RBP29.67■■■□□ 2.34
SPPL2B-208ENST00000612623 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
SPPL2B-208ENST00000612623 ABCA10Q8WWZ4 1543 aa29.59■■■□□ 2.33
SPPL2B-208ENST00000612623 SYNJ2O15056 1496 aa29.57■■■□□ 2.32
SPPL2B-208ENST00000612623 WRNQ14191 1432 aaPredicted RBP eCLIP29.55■■■□□ 2.325e-6■■□□□ 12.5
SPPL2B-208ENST00000612623 ARAP1Q96P48 1450 aa29.5■■■□□ 2.31
SPPL2B-208ENST00000612623 SYNJ1O43426 1573 aa29.5■■■□□ 2.31
SPPL2B-208ENST00000612623 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
SPPL2B-208ENST00000612623 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
SPPL2B-208ENST00000612623 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
SPPL2B-208ENST00000612623 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
SPPL2B-208ENST00000612623 BIVM-ERCC5R4GMW8 1640 aa29.37■■■□□ 2.29
SPPL2B-208ENST00000612623 TRHP20396 242 aaPredicted RBP29.35■■■□□ 2.29
SPPL2B-208ENST00000612623 GRIN2AQ12879 1464 aa29.28■■■□□ 2.28
SPPL2B-208ENST00000612623 FHAD1B1AJZ9 1412 aa29.27■■■□□ 2.28
SPPL2B-208ENST00000612623 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.27
SPPL2B-208ENST00000612623 NUP160Q12769 1436 aa29.2■■■□□ 2.26
SPPL2B-208ENST00000612623 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
SPPL2B-208ENST00000612623 CEP170Q5SW79 1584 aa29.1■■■□□ 2.25
SPPL2B-208ENST00000612623 JPH4Q96JJ6 628 aa29.04■■■□□ 2.24
SPPL2B-208ENST00000612623 ERCC6L2Q5T890 1561 aa29.01■■■□□ 2.24
SPPL2B-208ENST00000612623 IGF1RP08069 1367 aa28.99■■■□□ 2.23
SPPL2B-208ENST00000612623 SHROOM2Q13796 1616 aa28.97■■■□□ 2.23
SPPL2B-208ENST00000612623 KIF27Q86VH2 1401 aa28.95■■■□□ 2.23
SPPL2B-208ENST00000612623 PRG4Q92954 1404 aaPredicted RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms