RNA–Protein interactions for RNA: ENST00000367212.7

ZC3H11A-203, Transcript of zinc finger CCCH-type containing 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H11A, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-203ENST00000367212 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
ZC3H11A-203ENST00000367212 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
ZC3H11A-203ENST00000367212 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
ZC3H11A-203ENST00000367212 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
ZC3H11A-203ENST00000367212 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
ZC3H11A-203ENST00000367212 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
ZC3H11A-203ENST00000367212 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
ZC3H11A-203ENST00000367212 CHIC1Q5VXU3 224 aa13.43□□□□□ -0.26
ZC3H11A-203ENST00000367212 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
ZC3H11A-203ENST00000367212 ABCC9O60706 1549 aa13.29□□□□□ -0.28
ZC3H11A-203ENST00000367212 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
ZC3H11A-203ENST00000367212 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
ZC3H11A-203ENST00000367212 NACADO15069 1562 aa13.1□□□□□ -0.31
ZC3H11A-203ENST00000367212 HRCP23327 699 aa13.05□□□□□ -0.32
ZC3H11A-203ENST00000367212 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
ZC3H11A-203ENST00000367212 LOC105371045A0A1W2PR82 267 aa12.96□□□□□ -0.34
ZC3H11A-203ENST00000367212 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.34
ZC3H11A-203ENST00000367212 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
ZC3H11A-203ENST00000367212 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
ZC3H11A-203ENST00000367212 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
ZC3H11A-203ENST00000367212 TRIM26Q12899 539 aaPredicted RBP12.8□□□□□ -0.36
ZC3H11A-203ENST00000367212 WIZO95785 1651 aa12.8□□□□□ -0.36
ZC3H11A-203ENST00000367212 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
ZC3H11A-203ENST00000367212 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
ZC3H11A-203ENST00000367212 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
ZC3H11A-203ENST00000367212 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
ZC3H11A-203ENST00000367212 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
ZC3H11A-203ENST00000367212 UNC13AQ9UPW8 1703 aa12.65□□□□□ -0.38
ZC3H11A-203ENST00000367212 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
ZC3H11A-203ENST00000367212 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
ZC3H11A-203ENST00000367212 CCDC88BA6NC98 1476 aa12.57□□□□□ -0.4
ZC3H11A-203ENST00000367212 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
ZC3H11A-203ENST00000367212 BICRAQ9NZM4 1560 aa12.49□□□□□ -0.41
ZC3H11A-203ENST00000367212 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
ZC3H11A-203ENST00000367212 PEG3Q9GZU2 1588 aa12.48□□□□□ -0.41
ZC3H11A-203ENST00000367212 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.42
ZC3H11A-203ENST00000367212 EEA1Q15075 1411 aa12.43□□□□□ -0.42
ZC3H11A-203ENST00000367212 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
ZC3H11A-203ENST00000367212 SOGA1O94964 1423 aa12.38□□□□□ -0.43
ZC3H11A-203ENST00000367212 TNIKQ9UKE5 1360 aa12.37□□□□□ -0.43
ZC3H11A-203ENST00000367212 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
ZC3H11A-203ENST00000367212 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.431e-7■■□□□ 12.5
ZC3H11A-203ENST00000367212 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
ZC3H11A-203ENST00000367212 ATAD2BQ9ULI0 1458 aa12.32□□□□□ -0.44
ZC3H11A-203ENST00000367212 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
ZC3H11A-203ENST00000367212 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
ZC3H11A-203ENST00000367212 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.45
ZC3H11A-203ENST00000367212 SYNJ1O43426 1573 aa12.27□□□□□ -0.45
ZC3H11A-203ENST00000367212 KIF21BO75037 1637 aa12.25□□□□□ -0.45
ZC3H11A-203ENST00000367212 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
ZC3H11A-203ENST00000367212 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
ZC3H11A-203ENST00000367212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
ZC3H11A-203ENST00000367212 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
ZC3H11A-203ENST00000367212 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
ZC3H11A-203ENST00000367212 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
ZC3H11A-203ENST00000367212 BIVM-ERCC5R4GMW8 1640 aa12.13□□□□□ -0.47
ZC3H11A-203ENST00000367212 CLIP1P30622 1438 aa12.12□□□□□ -0.47
ZC3H11A-203ENST00000367212 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
ZC3H11A-203ENST00000367212 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
ZC3H11A-203ENST00000367212 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
ZC3H11A-203ENST00000367212 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
ZC3H11A-203ENST00000367212 ERICH3Q5RHP9 1530 aa12.07□□□□□ -0.48
ZC3H11A-203ENST00000367212 PRXQ9BXM0 1461 aa12.03□□□□□ -0.48
ZC3H11A-203ENST00000367212 CFTRP13569 1480 aa12□□□□□ -0.49
ZC3H11A-203ENST00000367212 CUX1P39880 1505 aa12□□□□□ -0.49
ZC3H11A-203ENST00000367212 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
ZC3H11A-203ENST00000367212 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
ZC3H11A-203ENST00000367212 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
ZC3H11A-203ENST00000367212 APLP2Q06481 763 aa11.97□□□□□ -0.49
ZC3H11A-203ENST00000367212 KIF27Q86VH2 1401 aa11.96□□□□□ -0.5
ZC3H11A-203ENST00000367212 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
ZC3H11A-203ENST00000367212 ZNF316A6NFI3 1004 aaPredicted RBP11.92□□□□□ -0.5
ZC3H11A-203ENST00000367212 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
ZC3H11A-203ENST00000367212 ACIN1Q9UKV3 1341 aaKnown RBP11.9□□□□□ -0.5
ZC3H11A-203ENST00000367212 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
ZC3H11A-203ENST00000367212 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
ZC3H11A-203ENST00000367212 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
ZC3H11A-203ENST00000367212 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
ZC3H11A-203ENST00000367212 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
ZC3H11A-203ENST00000367212 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
ZC3H11A-203ENST00000367212 ARHGAP35Q9NRY4 1499 aa11.84□□□□□ -0.51
ZC3H11A-203ENST00000367212 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
ZC3H11A-203ENST00000367212 IGF1RP08069 1367 aa11.81□□□□□ -0.52
ZC3H11A-203ENST00000367212 KANK4Q5T7N3 995 aaPredicted RBP11.81□□□□□ -0.52
ZC3H11A-203ENST00000367212 CUX2O14529 1486 aa11.8□□□□□ -0.52
ZC3H11A-203ENST00000367212 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
ZC3H11A-203ENST00000367212 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
ZC3H11A-203ENST00000367212 FGD5Q6ZNL6 1462 aa11.78□□□□□ -0.52
ZC3H11A-203ENST00000367212 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
ZC3H11A-203ENST00000367212 CCNB3Q8WWL7 1395 aa11.75□□□□□ -0.53
ZC3H11A-203ENST00000367212 CC2D2AQ9P2K1 1620 aa11.74□□□□□ -0.53
ZC3H11A-203ENST00000367212 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
ZC3H11A-203ENST00000367212 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
ZC3H11A-203ENST00000367212 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.53
ZC3H11A-203ENST00000367212 MIER1Q8N108 512 aa11.7□□□□□ -0.54
ZC3H11A-203ENST00000367212 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
ZC3H11A-203ENST00000367212 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
ZC3H11A-203ENST00000367212 ABCA10Q8WWZ4 1543 aa11.69□□□□□ -0.54
ZC3H11A-203ENST00000367212 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
ZC3H11A-203ENST00000367212 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms