RNA–Protein interactions for RNA: ENST00000568235.5

ACSM3-213, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-213ENST00000568235 NISCHQ9Y2I1 1504 aa30.52■■■□□ 2.48
ACSM3-213ENST00000568235 ABCC9O60706 1549 aa27.49■■□□□ 1.99
ACSM3-213ENST00000568235 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
ACSM3-213ENST00000568235 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
ACSM3-213ENST00000568235 NACADO15069 1562 aa25.9■■□□□ 1.74
ACSM3-213ENST00000568235 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
ACSM3-213ENST00000568235 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
ACSM3-213ENST00000568235 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
ACSM3-213ENST00000568235 UNC13AQ9UPW8 1703 aa25.52■■□□□ 1.68
ACSM3-213ENST00000568235 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
ACSM3-213ENST00000568235 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
ACSM3-213ENST00000568235 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
ACSM3-213ENST00000568235 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
ACSM3-213ENST00000568235 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
ACSM3-213ENST00000568235 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
ACSM3-213ENST00000568235 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
ACSM3-213ENST00000568235 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
ACSM3-213ENST00000568235 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
ACSM3-213ENST00000568235 NCAPD3P42695 1498 aa23.91■■□□□ 1.42
ACSM3-213ENST00000568235 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
ACSM3-213ENST00000568235 SMARCA4P51532 1647 aa23.83■■□□□ 1.41
ACSM3-213ENST00000568235 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
ACSM3-213ENST00000568235 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
ACSM3-213ENST00000568235 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
ACSM3-213ENST00000568235 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
ACSM3-213ENST00000568235 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
ACSM3-213ENST00000568235 CUX2O14529 1486 aa23.65■■□□□ 1.38
ACSM3-213ENST00000568235 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
ACSM3-213ENST00000568235 NESP48681 1621 aa23.61■■□□□ 1.37
ACSM3-213ENST00000568235 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
ACSM3-213ENST00000568235 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
ACSM3-213ENST00000568235 LAMC3Q9Y6N6 1575 aa23.37■■□□□ 1.33
ACSM3-213ENST00000568235 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
ACSM3-213ENST00000568235 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
ACSM3-213ENST00000568235 WIZO95785 1651 aa23.27■■□□□ 1.32
ACSM3-213ENST00000568235 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
ACSM3-213ENST00000568235 CADPSQ9ULU8 1353 aa23.19■■□□□ 1.3
ACSM3-213ENST00000568235 MRC2Q9UBG0 1479 aa23.07■■□□□ 1.28
ACSM3-213ENST00000568235 RSF1Q96T23 1441 aaPredicted RBP23.03■■□□□ 1.28
ACSM3-213ENST00000568235 WDR62O43379 1518 aa23.01■■□□□ 1.27
ACSM3-213ENST00000568235 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
ACSM3-213ENST00000568235 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
ACSM3-213ENST00000568235 TOP2AP11388 1531 aaKnown RBP22.95■■□□□ 1.26
ACSM3-213ENST00000568235 CFTRP13569 1480 aa22.92■■□□□ 1.26
ACSM3-213ENST00000568235 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
ACSM3-213ENST00000568235 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
ACSM3-213ENST00000568235 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
ACSM3-213ENST00000568235 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
ACSM3-213ENST00000568235 OSCARQ8IYS5 282 aa22.56■■□□□ 1.2
ACSM3-213ENST00000568235 TOPBP1Q92547 1522 aa22.52■■□□□ 1.19
ACSM3-213ENST00000568235 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.19
ACSM3-213ENST00000568235 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
ACSM3-213ENST00000568235 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
ACSM3-213ENST00000568235 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
ACSM3-213ENST00000568235 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
ACSM3-213ENST00000568235 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
ACSM3-213ENST00000568235 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
ACSM3-213ENST00000568235 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
ACSM3-213ENST00000568235 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
ACSM3-213ENST00000568235 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.161e-9■□□□□ 8.5
ACSM3-213ENST00000568235 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
ACSM3-213ENST00000568235 ARHGEF11O15085 1522 aa22.23■■□□□ 1.15
ACSM3-213ENST00000568235 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
ACSM3-213ENST00000568235 CHD1O14646 1710 aa22.21■■□□□ 1.15
ACSM3-213ENST00000568235 SOGA1O94964 1423 aa22.17■■□□□ 1.14
ACSM3-213ENST00000568235 FBLN2P98095 1184 aa22.17■■□□□ 1.14
ACSM3-213ENST00000568235 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
ACSM3-213ENST00000568235 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
ACSM3-213ENST00000568235 CUX1P39880 1505 aa22.12■■□□□ 1.13
ACSM3-213ENST00000568235 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
ACSM3-213ENST00000568235 SNAPC4Q5SXM2 1469 aa22.07■■□□□ 1.12
ACSM3-213ENST00000568235 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
ACSM3-213ENST00000568235 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
ACSM3-213ENST00000568235 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
ACSM3-213ENST00000568235 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
ACSM3-213ENST00000568235 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
ACSM3-213ENST00000568235 CHMP7Q8WUX9 453 aaPredicted RBP21.97■■□□□ 1.11
ACSM3-213ENST00000568235 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
ACSM3-213ENST00000568235 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
ACSM3-213ENST00000568235 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
ACSM3-213ENST00000568235 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
ACSM3-213ENST00000568235 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
ACSM3-213ENST00000568235 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
ACSM3-213ENST00000568235 ABCA5Q8WWZ7 1642 aa21.85■■□□□ 1.09
ACSM3-213ENST00000568235 TRHP20396 242 aaPredicted RBP21.85■■□□□ 1.09
ACSM3-213ENST00000568235 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
ACSM3-213ENST00000568235 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
ACSM3-213ENST00000568235 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
ACSM3-213ENST00000568235 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
ACSM3-213ENST00000568235 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
ACSM3-213ENST00000568235 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
ACSM3-213ENST00000568235 ERCC6L2Q5T890 1561 aa21.64■■□□□ 1.05
ACSM3-213ENST00000568235 NUP160Q12769 1436 aa21.63■■□□□ 1.05
ACSM3-213ENST00000568235 FHAD1B1AJZ9 1412 aa21.62■■□□□ 1.05
ACSM3-213ENST00000568235 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
ACSM3-213ENST00000568235 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
ACSM3-213ENST00000568235 PRG4Q92954 1404 aaPredicted RBP21.44■■□□□ 1.02
ACSM3-213ENST00000568235 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
ACSM3-213ENST00000568235 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
ACSM3-213ENST00000568235 IGF1RP08069 1367 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms