Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.874e-7■■□□□ 14.5
PABPN1Q86U42 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.874e-7■■□□□ 14.5
PABPN1Q86U42 TRO-215ENST00000445561 2597 ntTSL 1 (best)19.84■□□□□ 0.774e-7■■□□□ 14.5
PABPN1Q86U42 ERGIC3-210ENST00000451605 520 ntTSL 219.63■□□□□ 0.735e-10■■□□□ 14.5
PABPN1Q86U42 TRIM28-214ENST00000600840 338 ntTSL 218.52■□□□□ 0.564e-7■■□□□ 14.5
PABPN1Q86U42 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.354e-7■■□□□ 14.5
PABPN1Q86U42 KIAA0141-202ENST00000432126 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.214e-7■■□□□ 14.5
PABPN1Q86U42 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.24e-7■■□□□ 14.5
PABPN1Q86U42 TRO-208ENST00000420798 3613 ntTSL 2 BASIC15.85■□□□□ 0.134e-7■■□□□ 14.5
PABPN1Q86U42 FASN-209ENST00000636628 100 ntTSL 59.92□□□□□ -0.827e-13■■□□□ 14.5
PABPN1Q86U42 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.044e-7■■□□□ 14.5
PABPN1Q86U42 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.248e-7■■□□□ 14.4
PABPN1Q86U42 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.928e-7■■□□□ 14.4
PABPN1Q86U42 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.928e-7■■□□□ 14.4
PABPN1Q86U42 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.778e-7■■□□□ 14.4
PABPN1Q86U42 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC19.25■□□□□ 0.678e-7■■□□□ 14.4
PABPN1Q86U42 ILF3-223ENST00000593061 475 ntTSL 339.34■■■■□ 3.893e-7■■□□□ 14.4
PABPN1Q86U42 PILRB-203ENST00000431140 772 ntTSL 328.03■■■□□ 2.085e-7■■□□□ 14.4
PABPN1Q86U42 AMPD2-204ENST00000369840 3130 ntAPPRIS ALT2 TSL 517.92■□□□□ 0.461e-6■■□□□ 14.4
PABPN1Q86U42 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.041e-7■■□□□ 14.4
PABPN1Q86U42 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.041e-6■■□□□ 14.4
PABPN1Q86U42 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC21.55■■□□□ 1.041e-6■■□□□ 14.4
PABPN1Q86U42 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.891e-6■■□□□ 14.4
PABPN1Q86U42 NRDC-203ENST00000440943 1660 ntTSL 516.47■□□□□ 0.231e-6■■□□□ 14.4
PABPN1Q86U42 NRDC-210ENST00000485608 3149 ntTSL 212.18□□□□□ -0.461e-6■■□□□ 14.4
PABPN1Q86U42 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.921e-6■■□□□ 14.4
PABPN1Q86U42 GGA1-214ENST00000449944 927 ntTSL 539.77■■■■□ 3.965e-10■■□□□ 14.4
PABPN1Q86U42 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.938e-7■■□□□ 14.4
PABPN1Q86U42 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC26.72■■□□□ 1.874e-8■■□□□ 14.4
PABPN1Q86U42 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.494e-8■■□□□ 14.4
PABPN1Q86U42 HGS-202ENST00000570355 735 ntTSL 532.18■■■□□ 2.744e-7■■□□□ 14.4
PABPN1Q86U42 PPP6R2-206ENST00000427222 1811 ntTSL 531.93■■■□□ 2.78e-7■■□□□ 14.4
PABPN1Q86U42 MST1-210ENST00000484673 1307 ntTSL 239.47■■■■□ 3.911e-8■■□□□ 14.4
PABPN1Q86U42 ANPEP-204ENST00000559761 469 ntTSL 217.15■□□□□ 0.341e-6■■□□□ 14.4
PABPN1Q86U42 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.281e-7■■□□□ 14.4
PABPN1Q86U42 NSMF-209ENST00000482448 551 ntTSL 322.01■■□□□ 1.113e-9■■□□□ 14.4
PABPN1Q86U42 ARHGAP45-214ENST00000591293 645 ntTSL 339.76■■■■□ 3.963e-7■■□□□ 14.4
PABPN1Q86U42 STARD3-213ENST00000578384 721 ntTSL 336.29■■■■□ 3.43e-7■■□□□ 14.4
PABPN1Q86U42 STARD3-215ENST00000578686 662 ntTSL 235.44■■■■□ 3.263e-7■■□□□ 14.4
PABPN1Q86U42 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC33.83■■■■□ 3.012e-6■■□□□ 14.4
PABPN1Q86U42 AKT2-232ENST00000578615 877 ntTSL 531.77■■■□□ 2.683e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-209ENST00000611968 630 ntTSL 331.35■■■□□ 2.613e-7■■□□□ 14.4
PABPN1Q86U42 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC30.36■■■□□ 2.452e-6■■□□□ 14.4
PABPN1Q86U42 SEMA6C-201ENST00000341697 5262 ntTSL 1 (best)30.01■■■□□ 2.392e-6■■□□□ 14.4
PABPN1Q86U42 SEMA6C-202ENST00000368912 3697 ntTSL 1 (best)25.74■■□□□ 1.712e-6■■□□□ 14.4
PABPN1Q86U42 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC25.33■■□□□ 1.643e-7■■□□□ 14.4
PABPN1Q86U42 STARD3-226ENST00000583884 602 ntTSL 325.17■■□□□ 1.623e-7■■□□□ 14.4
PABPN1Q86U42 SEMA6C-204ENST00000368914 3892 ntTSL 1 (best)24.83■■□□□ 1.562e-6■■□□□ 14.4
PABPN1Q86U42 DDX3X-212ENST00000616050 818 ntTSL 524.19■■□□□ 1.463e-7■■□□□ 14.4
PABPN1Q86U42 REC8-203ENST00000558381 405 ntTSL 222.91■■□□□ 1.263e-7■■□□□ 14.4
PABPN1Q86U42 KANK1-203ENST00000382289 1926 ntTSL 1 (best)20.24■□□□□ 0.833e-7■■□□□ 14.4
PABPN1Q86U42 SEMA6C-203ENST00000368913 3817 ntAPPRIS P1 TSL 1 (best)19.4■□□□□ 0.72e-6■■□□□ 14.4
PABPN1Q86U42 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC17.76■□□□□ 0.433e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC17.7■□□□□ 0.423e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.413e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC17.08■□□□□ 0.323e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-220ENST00000630370 3120 ntTSL 516.43■□□□□ 0.223e-7■■□□□ 14.4
PABPN1Q86U42 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.133e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC15.72■□□□□ 0.113e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-218ENST00000629785 3457 ntTSL 515.09■□□□□ 0.013e-7■■□□□ 14.4
PABPN1Q86U42 KANK1-209ENST00000489369 7193 ntTSL 515.06■□□□□ 03e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-221ENST00000630858 3181 ntTSL 515.01□□□□□ -0.013e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.033e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-219ENST00000630255 3289 ntTSL 514.48□□□□□ -0.093e-7■■□□□ 14.4
PABPN1Q86U42 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.133e-7■■□□□ 14.4
PABPN1Q86U42 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.143e-7■■□□□ 14.4
PABPN1Q86U42 DDX3X-204ENST00000478993 3397 ntTSL 1 (best)13.85□□□□□ -0.193e-7■■□□□ 14.4
PABPN1Q86U42 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.263e-7■■□□□ 14.4
PABPN1Q86U42 ENTPD6-204ENST00000376666 2100 ntTSL 521.95■■□□□ 1.12e-6■■□□□ 14.4
PABPN1Q86U42 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.53e-7■■□□□ 14.3
PABPN1Q86U42 AUP1-204ENST00000463900 1645 ntTSL 1 (best)33.64■■■□□ 2.983e-7■■□□□ 14.3
PABPN1Q86U42 AUP1-202ENST00000425118 1581 ntTSL 1 (best)33.3■■■□□ 2.923e-7■■□□□ 14.3
PABPN1Q86U42 AUP1-206ENST00000466894 1658 ntTSL 531.7■■■□□ 2.673e-7■■□□□ 14.3
PABPN1Q86U42 COL18A1-207ENST00000473212 2515 ntTSL 232.79■■■□□ 2.842e-15■■□□□ 14.3
PABPN1Q86U42 COL18A1-205ENST00000423214 839 ntTSL 533.68■■■□□ 2.982e-15■■□□□ 14.3
PABPN1Q86U42 RHOT2-204ENST00000561983 1044 ntTSL 549.76■■■■■ 5.567e-7■■□□□ 14.3
PABPN1Q86U42 RHOT2-209ENST00000563134 736 ntTSL 248.77■■■■■ 5.47e-7■■□□□ 14.3
PABPN1Q86U42 RHOT2-226ENST00000570280 708 ntTSL 343.92■■■■■ 4.627e-7■■□□□ 14.3
PABPN1Q86U42 RHOT2-211ENST00000563776 923 ntTSL 338.01■■■■□ 3.687e-7■■□□□ 14.3
PABPN1Q86U42 RHOT2-203ENST00000561929 625 ntTSL 227.22■■□□□ 1.957e-7■■□□□ 14.3
PABPN1Q86U42 EIF6-204ENST00000415116 739 ntTSL 540.56■■■■■ 4.085e-6■■□□□ 14.3
PABPN1Q86U42 MTA1-208ENST00000438610 2144 ntTSL 1 (best)33.01■■■□□ 2.889e-7■■□□□ 14.3
PABPN1Q86U42 CIRBP-205ENST00000585913 833 ntTSL 343.98■■■■■ 4.631e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC43.49■■■■■ 4.551e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-209ENST00000586555 716 ntTSL 242.02■■■■■ 4.321e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-237ENST00000592234 571 ntTSL 538.04■■■■□ 3.681e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-232ENST00000591376 830 ntTSL 338.04■■■■□ 3.681e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-210ENST00000586636 938 ntTSL 238.04■■■■□ 3.681e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-220ENST00000588917 1087 ntTSL 237.98■■■■□ 3.671e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-227ENST00000590188 361 ntTSL 336.37■■■■□ 3.411e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-245ENST00000621399 1044 ntTSL 1 (best)35.92■■■■□ 3.341e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-206ENST00000585914 1052 ntTSL 535.82■■■■□ 3.321e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-203ENST00000444172 584 ntTSL 334.32■■■■□ 3.081e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-212ENST00000587169 3028 ntTSL 226.43■■□□□ 1.821e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-228ENST00000590347 3117 ntTSL 222.92■■□□□ 1.261e-14■■□□□ 14.3
PABPN1Q86U42 CIRBP-242ENST00000593093 3528 ntTSL 221.55■■□□□ 1.041e-14■■□□□ 14.3
PABPN1Q86U42 AMPD2-205ENST00000393688 3217 ntTSL 1 (best) BASIC18.85■□□□□ 0.611e-6■■□□□ 14.3
PABPN1Q86U42 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.561e-6■■□□□ 14.3
PABPN1Q86U42 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC18.43■□□□□ 0.541e-6■■□□□ 14.3
PABPN1Q86U42 AKT1-204ENST00000544168 1564 ntTSL 233.38■■■□□ 2.932e-6■■□□□ 14.3
Retrieved 100 of 8,254 protein–RNA pairs in 227.9 ms