RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
SEMA6C-202ENST00000368912 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
SEMA6C-202ENST00000368912 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
SEMA6C-202ENST00000368912 ABCC9O60706 1549 aa26.66■■□□□ 1.86
SEMA6C-202ENST00000368912 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
SEMA6C-202ENST00000368912 PELP1Q8IZL8 1130 aaKnown RBP26.41■■□□□ 1.82
SEMA6C-202ENST00000368912 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
SEMA6C-202ENST00000368912 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
SEMA6C-202ENST00000368912 MYT1Q01538 1121 aa25.76■■□□□ 1.71
SEMA6C-202ENST00000368912 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.712e-6■■□□□ 14.4
SEMA6C-202ENST00000368912 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
SEMA6C-202ENST00000368912 HRCP23327 699 aa25.33■■□□□ 1.65
SEMA6C-202ENST00000368912 EHMT2Q96KQ7 1210 aa25.09■■□□□ 1.61
SEMA6C-202ENST00000368912 DCAF1Q9Y4B6 1507 aa25.06■■□□□ 1.6
SEMA6C-202ENST00000368912 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
SEMA6C-202ENST00000368912 NACADO15069 1562 aa25.03■■□□□ 1.6
SEMA6C-202ENST00000368912 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
SEMA6C-202ENST00000368912 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
SEMA6C-202ENST00000368912 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
SEMA6C-202ENST00000368912 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
SEMA6C-202ENST00000368912 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
SEMA6C-202ENST00000368912 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
SEMA6C-202ENST00000368912 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
SEMA6C-202ENST00000368912 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
SEMA6C-202ENST00000368912 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
SEMA6C-202ENST00000368912 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
SEMA6C-202ENST00000368912 TTBK1Q5TCY1 1321 aaPredicted RBP24.36■■□□□ 1.49
SEMA6C-202ENST00000368912 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
SEMA6C-202ENST00000368912 WIZO95785 1651 aa24.19■■□□□ 1.46
SEMA6C-202ENST00000368912 RANGAP1P46060 587 aaPredicted RBP24.12■■□□□ 1.45
SEMA6C-202ENST00000368912 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
SEMA6C-202ENST00000368912 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
SEMA6C-202ENST00000368912 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
SEMA6C-202ENST00000368912 BCL11AQ9H165 835 aa24.05■■□□□ 1.44
SEMA6C-202ENST00000368912 PRKCSHP14314 528 aaPredicted RBP24■■□□□ 1.43
SEMA6C-202ENST00000368912 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
SEMA6C-202ENST00000368912 BAZ1BQ9UIG0 1483 aaKnown RBP23.87■■□□□ 1.41
SEMA6C-202ENST00000368912 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
SEMA6C-202ENST00000368912 GTF3C3Q9Y5Q9 886 aa23.85■■□□□ 1.41
SEMA6C-202ENST00000368912 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
SEMA6C-202ENST00000368912 CENPBP07199 599 aaPredicted RBP23.8■■□□□ 1.4
SEMA6C-202ENST00000368912 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
SEMA6C-202ENST00000368912 ACIN1Q9UKV3 1341 aaKnown RBP23.77■■□□□ 1.4
SEMA6C-202ENST00000368912 UBTFP17480 764 aaKnown RBP23.74■■□□□ 1.39
SEMA6C-202ENST00000368912 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
SEMA6C-202ENST00000368912 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
SEMA6C-202ENST00000368912 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
SEMA6C-202ENST00000368912 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
SEMA6C-202ENST00000368912 ERICH6Q7L0X2 663 aa23.53■■□□□ 1.36
SEMA6C-202ENST00000368912 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
SEMA6C-202ENST00000368912 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.34
SEMA6C-202ENST00000368912 CC2D2AQ9P2K1 1620 aa23.39■■□□□ 1.33
SEMA6C-202ENST00000368912 WRNQ14191 1432 aaPredicted RBP eCLIP23.35■■□□□ 1.33
SEMA6C-202ENST00000368912 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
SEMA6C-202ENST00000368912 SOGA1O94964 1423 aa23.33■■□□□ 1.32
SEMA6C-202ENST00000368912 NCAPD3P42695 1498 aa23.31■■□□□ 1.32
SEMA6C-202ENST00000368912 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
SEMA6C-202ENST00000368912 NESP48681 1621 aa23.23■■□□□ 1.31
SEMA6C-202ENST00000368912 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
SEMA6C-202ENST00000368912 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
SEMA6C-202ENST00000368912 TRIM26Q12899 539 aaPredicted RBP23.16■■□□□ 1.3
SEMA6C-202ENST00000368912 ANP32EQ9BTT0 268 aa23.14■■□□□ 1.3
SEMA6C-202ENST00000368912 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
SEMA6C-202ENST00000368912 FBLN2P98095 1184 aa23.11■■□□□ 1.29
SEMA6C-202ENST00000368912 APLP2Q06481 763 aa23.05■■□□□ 1.28
SEMA6C-202ENST00000368912 YTHDC1Q96MU7 727 aaKnown RBP23.05■■□□□ 1.28
SEMA6C-202ENST00000368912 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
SEMA6C-202ENST00000368912 HMGXB3Q12766 1538 aa22.97■■□□□ 1.27
SEMA6C-202ENST00000368912 FANCD2Q9BXW9 1451 aa22.93■■□□□ 1.26
SEMA6C-202ENST00000368912 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
SEMA6C-202ENST00000368912 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
SEMA6C-202ENST00000368912 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
SEMA6C-202ENST00000368912 CFTRP13569 1480 aa22.9■■□□□ 1.26
SEMA6C-202ENST00000368912 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
SEMA6C-202ENST00000368912 CUX2O14529 1486 aa22.86■■□□□ 1.25
SEMA6C-202ENST00000368912 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
SEMA6C-202ENST00000368912 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
SEMA6C-202ENST00000368912 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
SEMA6C-202ENST00000368912 ITGAEP38570 1179 aa22.77■■□□□ 1.24
SEMA6C-202ENST00000368912 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
SEMA6C-202ENST00000368912 CUX1P39880 1505 aa22.74■■□□□ 1.23
SEMA6C-202ENST00000368912 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
SEMA6C-202ENST00000368912 HNRNPUL2Q1KMD3 747 aaKnown RBP22.71■■□□□ 1.23
SEMA6C-202ENST00000368912 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
SEMA6C-202ENST00000368912 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
SEMA6C-202ENST00000368912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.69■■□□□ 1.22
SEMA6C-202ENST00000368912 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
SEMA6C-202ENST00000368912 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
SEMA6C-202ENST00000368912 CARMIL1Q5VZK9 1371 aa22.62■■□□□ 1.21
SEMA6C-202ENST00000368912 CLIP1P30622 1438 aa22.61■■□□□ 1.21
SEMA6C-202ENST00000368912 EEA1Q15075 1411 aa22.59■■□□□ 1.21
SEMA6C-202ENST00000368912 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
SEMA6C-202ENST00000368912 TNIKQ9UKE5 1360 aa22.56■■□□□ 1.2
SEMA6C-202ENST00000368912 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.2
SEMA6C-202ENST00000368912 IGF1RP08069 1367 aa22.53■■□□□ 1.2
SEMA6C-202ENST00000368912 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
SEMA6C-202ENST00000368912 ANO8Q9HCE9 1232 aaPredicted RBP22.51■■□□□ 1.19
SEMA6C-202ENST00000368912 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
SEMA6C-202ENST00000368912 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
SEMA6C-202ENST00000368912 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms