RNA–Protein interactions for RNA: ENST00000466894.5

AUP1-206, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 5

Gene AUP1, Length 1,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-206ENST00000466894 NISCHQ9Y2I1 1504 aa39.25■■■■□ 3.87
AUP1-206ENST00000466894 CCDC180Q9P1Z9 1646 aa34.71■■■■□ 3.15
AUP1-206ENST00000466894 ABCC9O60706 1549 aa33.83■■■■□ 3.01
AUP1-206ENST00000466894 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
AUP1-206ENST00000466894 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
AUP1-206ENST00000466894 NACADO15069 1562 aa32.54■■■□□ 2.8
AUP1-206ENST00000466894 RB1CC1Q8TDY2 1594 aa32.54■■■□□ 2.8
AUP1-206ENST00000466894 DCAF1Q9Y4B6 1507 aa32.37■■■□□ 2.77
AUP1-206ENST00000466894 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
AUP1-206ENST00000466894 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
AUP1-206ENST00000466894 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
AUP1-206ENST00000466894 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.673e-7■■□□□ 14.3
AUP1-206ENST00000466894 BICRAQ9NZM4 1560 aa31.62■■■□□ 2.65
AUP1-206ENST00000466894 SHROOM4Q9ULL8 1493 aa31.41■■■□□ 2.62
AUP1-206ENST00000466894 DNAJC5BQ9UF47 199 aa30.84■■■□□ 2.53
AUP1-206ENST00000466894 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
AUP1-206ENST00000466894 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.5
AUP1-206ENST00000466894 CC2D2AQ9P2K1 1620 aa30.57■■■□□ 2.48
AUP1-206ENST00000466894 SMARCA4P51532 1647 aa30.42■■■□□ 2.46
AUP1-206ENST00000466894 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
AUP1-206ENST00000466894 MROH2BQ7Z745 1585 aa30.33■■■□□ 2.45
AUP1-206ENST00000466894 ATAD2BQ9ULI0 1458 aa30.15■■■□□ 2.42
AUP1-206ENST00000466894 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
AUP1-206ENST00000466894 WIZO95785 1651 aa30.07■■■□□ 2.4
AUP1-206ENST00000466894 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
AUP1-206ENST00000466894 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
AUP1-206ENST00000466894 PEG3Q9GZU2 1588 aa30.03■■■□□ 2.4
AUP1-206ENST00000466894 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
AUP1-206ENST00000466894 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
AUP1-206ENST00000466894 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
AUP1-206ENST00000466894 TOP2AP11388 1531 aaKnown RBP29.64■■■□□ 2.34
AUP1-206ENST00000466894 NESP48681 1621 aa29.39■■■□□ 2.3
AUP1-206ENST00000466894 CCDC88BA6NC98 1476 aa29.34■■■□□ 2.29
AUP1-206ENST00000466894 LAMC3Q9Y6N6 1575 aa29.21■■■□□ 2.27
AUP1-206ENST00000466894 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
AUP1-206ENST00000466894 CFTRP13569 1480 aa29.1■■■□□ 2.25
AUP1-206ENST00000466894 ERCC6Q03468 1493 aa29.08■■■□□ 2.25
AUP1-206ENST00000466894 KIF21AQ7Z4S6 1674 aa29.05■■■□□ 2.24
AUP1-206ENST00000466894 PDS5BQ9NTI5 1447 aa28.99■■■□□ 2.23
AUP1-206ENST00000466894 PRDM2Q13029 1718 aa28.96■■■□□ 2.23
AUP1-206ENST00000466894 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
AUP1-206ENST00000466894 CEP164Q9UPV0 1460 aa28.83■■■□□ 2.21
AUP1-206ENST00000466894 THOC2Q8NI27 1593 aaKnown RBP28.79■■■□□ 2.2
AUP1-206ENST00000466894 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
AUP1-206ENST00000466894 URB2Q14146 1524 aaKnown RBP28.63■■■□□ 2.17
AUP1-206ENST00000466894 WDR62O43379 1518 aa28.6■■■□□ 2.17
AUP1-206ENST00000466894 CUX2O14529 1486 aa28.55■■■□□ 2.16
AUP1-206ENST00000466894 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
AUP1-206ENST00000466894 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
AUP1-206ENST00000466894 DNMBPQ6XZF7 1577 aa28.46■■■□□ 2.15
AUP1-206ENST00000466894 CUX1P39880 1505 aa28.42■■■□□ 2.14
AUP1-206ENST00000466894 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
AUP1-206ENST00000466894 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
AUP1-206ENST00000466894 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
AUP1-206ENST00000466894 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
AUP1-206ENST00000466894 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
AUP1-206ENST00000466894 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
AUP1-206ENST00000466894 BIVM-ERCC5R4GMW8 1640 aa28.21■■■□□ 2.11
AUP1-206ENST00000466894 IFT140Q96RY7 1462 aa28.17■■■□□ 2.1
AUP1-206ENST00000466894 TARBP1Q13395 1621 aaKnown RBP28.16■■■□□ 2.1
AUP1-206ENST00000466894 SOGA1O94964 1423 aa28.16■■■□□ 2.1
AUP1-206ENST00000466894 ZNF608Q9ULD9 1512 aaPredicted RBP28.14■■■□□ 2.1
AUP1-206ENST00000466894 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
AUP1-206ENST00000466894 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
AUP1-206ENST00000466894 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.083e-11■■■■■ 56
AUP1-206ENST00000466894 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
AUP1-206ENST00000466894 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
AUP1-206ENST00000466894 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
AUP1-206ENST00000466894 DNAJC5Q9H3Z4 198 aa27.87■■■□□ 2.05
AUP1-206ENST00000466894 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
AUP1-206ENST00000466894 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.05
AUP1-206ENST00000466894 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
AUP1-206ENST00000466894 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
AUP1-206ENST00000466894 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
AUP1-206ENST00000466894 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
AUP1-206ENST00000466894 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
AUP1-206ENST00000466894 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
AUP1-206ENST00000466894 FBLN2P98095 1184 aa27.67■■■□□ 2.02
AUP1-206ENST00000466894 CHD1O14646 1710 aa27.66■■■□□ 2.02
AUP1-206ENST00000466894 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
AUP1-206ENST00000466894 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
AUP1-206ENST00000466894 ADAMTS12P58397 1594 aa27.56■■■□□ 2
AUP1-206ENST00000466894 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
AUP1-206ENST00000466894 IGF1RP08069 1367 aa27.54■■■□□ 2
AUP1-206ENST00000466894 SYNJ2O15056 1496 aa27.54■■■□□ 2
AUP1-206ENST00000466894 OSCARQ8IYS5 282 aa27.49■■□□□ 1.99
AUP1-206ENST00000466894 FHAD1B1AJZ9 1412 aa27.48■■□□□ 1.99
AUP1-206ENST00000466894 FAM9AQ8IZU1 332 aaPredicted RBP27.47■■□□□ 1.99
AUP1-206ENST00000466894 CUL7Q14999 1698 aa27.44■■□□□ 1.98
AUP1-206ENST00000466894 GRIN2AQ12879 1464 aa27.42■■□□□ 1.98
AUP1-206ENST00000466894 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.98
AUP1-206ENST00000466894 CEP170Q5SW79 1584 aa27.32■■□□□ 1.96
AUP1-206ENST00000466894 CSRNP3Q8WYN3 585 aa27.3■■□□□ 1.96
AUP1-206ENST00000466894 EEA1Q15075 1411 aa27.27■■□□□ 1.96
AUP1-206ENST00000466894 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.95
AUP1-206ENST00000466894 NUP160Q12769 1436 aa27.25■■□□□ 1.95
AUP1-206ENST00000466894 RAPGEF2Q9Y4G8 1499 aa27.25■■□□□ 1.95
AUP1-206ENST00000466894 PRXQ9BXM0 1461 aa27.22■■□□□ 1.95
AUP1-206ENST00000466894 EHMT2Q96KQ7 1210 aa27.2■■□□□ 1.94
AUP1-206ENST00000466894 RIMBP3CA6NJZ7 1639 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms