RNA–Protein interactions for RNA: ENST00000593061.5

ILF3-223, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 3

Gene ILF3, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-223ENST00000593061 NISCHQ9Y2I1 1504 aa47.6■■■■■ 5.21
ILF3-223ENST00000593061 CCDC180Q9P1Z9 1646 aa42.57■■■■■ 4.41
ILF3-223ENST00000593061 ABCC9O60706 1549 aa42.2■■■■■ 4.35
ILF3-223ENST00000593061 RB1CC1Q8TDY2 1594 aa40.32■■■■■ 4.05
ILF3-223ENST00000593061 NACADO15069 1562 aa40.12■■■■■ 4.01
ILF3-223ENST00000593061 DCAF8L2P0C7V8 631 aa40.08■■■■■ 4.01
ILF3-223ENST00000593061 MYO15BQ96JP2 1530 aa39.64■■■■□ 3.94
ILF3-223ENST00000593061 ZCCHC6Q5VYS8 1495 aaKnown RBP39.54■■■■□ 3.92
ILF3-223ENST00000593061 UNC13AQ9UPW8 1703 aa39.48■■■■□ 3.91
ILF3-223ENST00000593061 PABPN1Q86U42 306 aaKnown RBP eCLIP39.34■■■■□ 3.893e-7■■□□□ 14.4
ILF3-223ENST00000593061 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
ILF3-223ENST00000593061 DNAJC5BQ9UF47 199 aa39.16■■■■□ 3.86
ILF3-223ENST00000593061 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
ILF3-223ENST00000593061 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
ILF3-223ENST00000593061 SHROOM4Q9ULL8 1493 aa38.58■■■■□ 3.77
ILF3-223ENST00000593061 EIF4G1Q04637 1599 aaKnown RBP38.14■■■■□ 3.7
ILF3-223ENST00000593061 CC2D2AQ9P2K1 1620 aa38.14■■■■□ 3.7
ILF3-223ENST00000593061 CECR2Q9BXF3 1484 aa37.95■■■■□ 3.67
ILF3-223ENST00000593061 SMARCA4P51532 1647 aa37.08■■■■□ 3.53
ILF3-223ENST00000593061 NCAPD3P42695 1498 aa37■■■■□ 3.51
ILF3-223ENST00000593061 ATAD2BQ9ULI0 1458 aa36.98■■■■□ 3.51
ILF3-223ENST00000593061 BAZ1AQ9NRL2 1556 aaPredicted RBP36.94■■■■□ 3.5
ILF3-223ENST00000593061 SMARCA2P51531 1590 aa36.91■■■■□ 3.5
ILF3-223ENST00000593061 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
ILF3-223ENST00000593061 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.47
ILF3-223ENST00000593061 BAZ1BQ9UIG0 1483 aaKnown RBP36.68■■■■□ 3.46
ILF3-223ENST00000593061 PEG3Q9GZU2 1588 aa36.66■■■■□ 3.46
ILF3-223ENST00000593061 ERCC6Q03468 1493 aa36.42■■■■□ 3.42
ILF3-223ENST00000593061 NESP48681 1621 aa36.37■■■■□ 3.41
ILF3-223ENST00000593061 WIZO95785 1651 aa36.32■■■■□ 3.41
ILF3-223ENST00000593061 LAMC3Q9Y6N6 1575 aa36.15■■■■□ 3.38
ILF3-223ENST00000593061 CUX2O14529 1486 aa36.15■■■■□ 3.38
ILF3-223ENST00000593061 RSF1Q96T23 1441 aaPredicted RBP36.06■■■■□ 3.36
ILF3-223ENST00000593061 KIF21AQ7Z4S6 1674 aa35.97■■■■□ 3.35
ILF3-223ENST00000593061 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
ILF3-223ENST00000593061 CADPSQ9ULU8 1353 aa35.91■■■■□ 3.34
ILF3-223ENST00000593061 PDS5BQ9NTI5 1447 aa35.91■■■■□ 3.34
ILF3-223ENST00000593061 TOP2AP11388 1531 aaKnown RBP35.86■■■■□ 3.33
ILF3-223ENST00000593061 DNAJC5Q9H3Z4 198 aa35.65■■■■□ 3.3
ILF3-223ENST00000593061 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
ILF3-223ENST00000593061 CFTRP13569 1480 aa35.59■■■■□ 3.29
ILF3-223ENST00000593061 CEP164Q9UPV0 1460 aa35.55■■■■□ 3.28
ILF3-223ENST00000593061 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
ILF3-223ENST00000593061 WDR62O43379 1518 aa35.49■■■■□ 3.27
ILF3-223ENST00000593061 CCDC88BA6NC98 1476 aa35.43■■■■□ 3.26
ILF3-223ENST00000593061 PRDM2Q13029 1718 aa35.37■■■■□ 3.25
ILF3-223ENST00000593061 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
ILF3-223ENST00000593061 TOPBP1Q92547 1522 aa34.91■■■■□ 3.18
ILF3-223ENST00000593061 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
ILF3-223ENST00000593061 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
ILF3-223ENST00000593061 ABCC8Q09428 1581 aa34.83■■■■□ 3.17
ILF3-223ENST00000593061 IFT140Q96RY7 1462 aa34.8■■■■□ 3.16
ILF3-223ENST00000593061 ZNF608Q9ULD9 1512 aaPredicted RBP34.73■■■■□ 3.15
ILF3-223ENST00000593061 EIF4G3O43432 1585 aaKnown RBP34.59■■■■□ 3.13
ILF3-223ENST00000593061 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
ILF3-223ENST00000593061 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
ILF3-223ENST00000593061 OSCARQ8IYS5 282 aa34.56■■■■□ 3.12
ILF3-223ENST00000593061 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.113e-14■■■■□ 20
ILF3-223ENST00000593061 RAD54L2Q9Y4B4 1467 aa34.46■■■■□ 3.11
ILF3-223ENST00000593061 CUX1P39880 1505 aa34.46■■■■□ 3.11
ILF3-223ENST00000593061 FGD5Q6ZNL6 1462 aa34.44■■■■□ 3.1
ILF3-223ENST00000593061 SOGA1O94964 1423 aa34.42■■■■□ 3.1
ILF3-223ENST00000593061 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
ILF3-223ENST00000593061 TDRD9Q8NDG6 1382 aaKnown RBP34.32■■■■□ 3.08
ILF3-223ENST00000593061 CHD1O14646 1710 aa34.3■■■■□ 3.08
ILF3-223ENST00000593061 WDR97A6NE52 1622 aa34.22■■■■□ 3.07
ILF3-223ENST00000593061 FBLN2P98095 1184 aa34.19■■■■□ 3.06
ILF3-223ENST00000593061 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
ILF3-223ENST00000593061 RIMBP3CA6NJZ7 1639 aa34.14■■■■□ 3.06
ILF3-223ENST00000593061 RIMBP3BA6NNM3 1639 aa34.14■■■■□ 3.06
ILF3-223ENST00000593061 RIMBP3Q9UFD9 1639 aa34.14■■■■□ 3.06
ILF3-223ENST00000593061 GRIN2BQ13224 1484 aa34.07■■■■□ 3.05
ILF3-223ENST00000593061 PBRM1Q86U86 1689 aa34.06■■■■□ 3.04
ILF3-223ENST00000593061 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
ILF3-223ENST00000593061 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
ILF3-223ENST00000593061 ABCA10Q8WWZ4 1543 aa34.04■■■■□ 3.04
ILF3-223ENST00000593061 WRNQ14191 1432 aaPredicted RBP eCLIP34.04■■■■□ 3.04
ILF3-223ENST00000593061 MAGI1Q96QZ7 1491 aaPredicted RBP34.03■■■■□ 3.04
ILF3-223ENST00000593061 GAPVD1Q14C86 1478 aa34.02■■■■□ 3.04
ILF3-223ENST00000593061 TOP2BQ02880 1626 aa34.02■■■■□ 3.04
ILF3-223ENST00000593061 SYNJ1O43426 1573 aa34.02■■■■□ 3.04
ILF3-223ENST00000593061 ABCA5Q8WWZ7 1642 aa33.98■■■■□ 3.03
ILF3-223ENST00000593061 CHMP7Q8WUX9 453 aaPredicted RBP33.97■■■■□ 3.03
ILF3-223ENST00000593061 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
ILF3-223ENST00000593061 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
ILF3-223ENST00000593061 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
ILF3-223ENST00000593061 ARAP1Q96P48 1450 aa33.74■■■□□ 2.99
ILF3-223ENST00000593061 ADAMTS12P58397 1594 aa33.71■■■□□ 2.99
ILF3-223ENST00000593061 GRIN2AQ12879 1464 aa33.65■■■□□ 2.98
ILF3-223ENST00000593061 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
ILF3-223ENST00000593061 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
ILF3-223ENST00000593061 CEP170Q5SW79 1584 aa33.53■■■□□ 2.96
ILF3-223ENST00000593061 NUP160Q12769 1436 aa33.49■■■□□ 2.95
ILF3-223ENST00000593061 ERCC6L2Q5T890 1561 aa33.37■■■□□ 2.93
ILF3-223ENST00000593061 KIF27Q86VH2 1401 aa33.36■■■□□ 2.93
ILF3-223ENST00000593061 SHROOM2Q13796 1616 aa33.32■■■□□ 2.92
ILF3-223ENST00000593061 TRHP20396 242 aaPredicted RBP33.3■■■□□ 2.92
ILF3-223ENST00000593061 IGF1RP08069 1367 aa33.26■■■□□ 2.92
ILF3-223ENST00000593061 CUL7Q14999 1698 aa33.26■■■□□ 2.91
ILF3-223ENST00000593061 RUSC2Q8N2Y8 1516 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms