RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
SEMA6C-204ENST00000368914 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
SEMA6C-204ENST00000368914 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
SEMA6C-204ENST00000368914 ABCC9O60706 1549 aa25.67■■□□□ 1.7
SEMA6C-204ENST00000368914 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
SEMA6C-204ENST00000368914 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
SEMA6C-204ENST00000368914 ZCCHC6Q5VYS8 1495 aaKnown RBP24.9■■□□□ 1.58
SEMA6C-204ENST00000368914 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.562e-6■■□□□ 14.4
SEMA6C-204ENST00000368914 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
SEMA6C-204ENST00000368914 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
SEMA6C-204ENST00000368914 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
SEMA6C-204ENST00000368914 NACADO15069 1562 aa24.02■■□□□ 1.43
SEMA6C-204ENST00000368914 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.42
SEMA6C-204ENST00000368914 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
SEMA6C-204ENST00000368914 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
SEMA6C-204ENST00000368914 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
SEMA6C-204ENST00000368914 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
SEMA6C-204ENST00000368914 RSF1Q96T23 1441 aaPredicted RBP23.54■■□□□ 1.36
SEMA6C-204ENST00000368914 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
SEMA6C-204ENST00000368914 MROH2BQ7Z745 1585 aa23.36■■□□□ 1.33
SEMA6C-204ENST00000368914 RANGAP1P46060 587 aaPredicted RBP23.32■■□□□ 1.32
SEMA6C-204ENST00000368914 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
SEMA6C-204ENST00000368914 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
SEMA6C-204ENST00000368914 WIZO95785 1651 aa23.09■■□□□ 1.29
SEMA6C-204ENST00000368914 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
SEMA6C-204ENST00000368914 BICRAQ9NZM4 1560 aa23■■□□□ 1.27
SEMA6C-204ENST00000368914 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
SEMA6C-204ENST00000368914 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
SEMA6C-204ENST00000368914 UNC13AQ9UPW8 1703 aa22.93■■□□□ 1.26
SEMA6C-204ENST00000368914 PPARGC1BQ86YN6 1023 aaKnown RBP22.89■■□□□ 1.26
SEMA6C-204ENST00000368914 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
SEMA6C-204ENST00000368914 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
SEMA6C-204ENST00000368914 CCDC88BA6NC98 1476 aa22.8■■□□□ 1.24
SEMA6C-204ENST00000368914 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
SEMA6C-204ENST00000368914 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
SEMA6C-204ENST00000368914 ATP1B4Q9UN42 357 aaPredicted RBP22.6■■□□□ 1.21
SEMA6C-204ENST00000368914 SMARCA2P51531 1590 aa22.58■■□□□ 1.21
SEMA6C-204ENST00000368914 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
SEMA6C-204ENST00000368914 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
SEMA6C-204ENST00000368914 PCGF6Q9BYE7 350 aa22.56■■□□□ 1.2
SEMA6C-204ENST00000368914 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
SEMA6C-204ENST00000368914 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
SEMA6C-204ENST00000368914 WRNQ14191 1432 aaPredicted RBP eCLIP22.42■■□□□ 1.18
SEMA6C-204ENST00000368914 FBLN2P98095 1184 aa22.42■■□□□ 1.18
SEMA6C-204ENST00000368914 APLP2Q06481 763 aa22.39■■□□□ 1.18
SEMA6C-204ENST00000368914 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
SEMA6C-204ENST00000368914 SOGA1O94964 1423 aa22.32■■□□□ 1.16
SEMA6C-204ENST00000368914 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
SEMA6C-204ENST00000368914 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
SEMA6C-204ENST00000368914 NESP48681 1621 aa22.27■■□□□ 1.16
SEMA6C-204ENST00000368914 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
SEMA6C-204ENST00000368914 ERCC6Q03468 1493 aa22.14■■□□□ 1.14
SEMA6C-204ENST00000368914 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
SEMA6C-204ENST00000368914 TDRD9Q8NDG6 1382 aaKnown RBP22.05■■□□□ 1.12
SEMA6C-204ENST00000368914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.04■■□□□ 1.12
SEMA6C-204ENST00000368914 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
SEMA6C-204ENST00000368914 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
SEMA6C-204ENST00000368914 HMGXB3Q12766 1538 aa22■■□□□ 1.11
SEMA6C-204ENST00000368914 ITGAEP38570 1179 aa22■■□□□ 1.11
SEMA6C-204ENST00000368914 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
SEMA6C-204ENST00000368914 CUX2O14529 1486 aa21.98■■□□□ 1.11
SEMA6C-204ENST00000368914 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
SEMA6C-204ENST00000368914 CFTRP13569 1480 aa21.95■■□□□ 1.1
SEMA6C-204ENST00000368914 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
SEMA6C-204ENST00000368914 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
SEMA6C-204ENST00000368914 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
SEMA6C-204ENST00000368914 CHMP7Q8WUX9 453 aaPredicted RBP21.86■■□□□ 1.09
SEMA6C-204ENST00000368914 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
SEMA6C-204ENST00000368914 TRIM26Q12899 539 aaPredicted RBP21.85■■□□□ 1.09
SEMA6C-204ENST00000368914 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
SEMA6C-204ENST00000368914 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
SEMA6C-204ENST00000368914 CEP162Q5TB80 1403 aa21.76■■□□□ 1.07
SEMA6C-204ENST00000368914 CUX1P39880 1505 aa21.74■■□□□ 1.07
SEMA6C-204ENST00000368914 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
SEMA6C-204ENST00000368914 CLIP1P30622 1438 aa21.72■■□□□ 1.07
SEMA6C-204ENST00000368914 RAPGEF2Q9Y4G8 1499 aa21.71■■□□□ 1.07
SEMA6C-204ENST00000368914 EEA1Q15075 1411 aa21.71■■□□□ 1.07
SEMA6C-204ENST00000368914 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
SEMA6C-204ENST00000368914 AQRO60306 1485 aaKnown RBP eCLIP21.66■■□□□ 1.06
SEMA6C-204ENST00000368914 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
SEMA6C-204ENST00000368914 IGF1RP08069 1367 aa21.61■■□□□ 1.05
SEMA6C-204ENST00000368914 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
SEMA6C-204ENST00000368914 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
SEMA6C-204ENST00000368914 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
SEMA6C-204ENST00000368914 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
SEMA6C-204ENST00000368914 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
SEMA6C-204ENST00000368914 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
SEMA6C-204ENST00000368914 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.02
SEMA6C-204ENST00000368914 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
SEMA6C-204ENST00000368914 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
SEMA6C-204ENST00000368914 ZNF777Q9ULD5 760 aaPredicted RBP21.39■■□□□ 1.02
SEMA6C-204ENST00000368914 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
SEMA6C-204ENST00000368914 MYT1LQ9UL68 1186 aa21.36■■□□□ 1.01
SEMA6C-204ENST00000368914 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
SEMA6C-204ENST00000368914 FHOD3Q2V2M9 1422 aa21.33■■□□□ 1.01
SEMA6C-204ENST00000368914 KCNH8Q96L42 1107 aa21.3■■□□□ 1
SEMA6C-204ENST00000368914 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
SEMA6C-204ENST00000368914 JPH4Q96JJ6 628 aa21.27■■□□□ 1
SEMA6C-204ENST00000368914 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
SEMA6C-204ENST00000368914 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms