RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 NISCHQ9Y2I1 1504 aa42.94■■■■■ 4.47
SEMA6C-210ENST00000621728 CCDC180Q9P1Z9 1646 aa37.57■■■■□ 3.61
SEMA6C-210ENST00000621728 ZCCHC6Q5VYS8 1495 aaKnown RBP36.01■■■■□ 3.35
SEMA6C-210ENST00000621728 ABCC9O60706 1549 aa35.92■■■■□ 3.34
SEMA6C-210ENST00000621728 DCAF8L2P0C7V8 631 aa35.63■■■■□ 3.29
SEMA6C-210ENST00000621728 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
SEMA6C-210ENST00000621728 MYO15BQ96JP2 1530 aa35.1■■■■□ 3.21
SEMA6C-210ENST00000621728 NACADO15069 1562 aa35.04■■■■□ 3.2
SEMA6C-210ENST00000621728 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
SEMA6C-210ENST00000621728 RB1CC1Q8TDY2 1594 aa34.85■■■■□ 3.17
SEMA6C-210ENST00000621728 SCRIBQ14160 1630 aa34.62■■■■□ 3.13
SEMA6C-210ENST00000621728 UNC13AQ9UPW8 1703 aa34.26■■■■□ 3.08
SEMA6C-210ENST00000621728 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
SEMA6C-210ENST00000621728 PABPN1Q86U42 306 aaKnown RBP eCLIP33.83■■■■□ 3.012e-6■■□□□ 14.4
SEMA6C-210ENST00000621728 CECR2Q9BXF3 1484 aa33.47■■■□□ 2.95
SEMA6C-210ENST00000621728 SUPT5HO00267 1087 aaKnown RBP33.4■■■□□ 2.94
SEMA6C-210ENST00000621728 MROH2BQ7Z745 1585 aa33.23■■■□□ 2.91
SEMA6C-210ENST00000621728 RSF1Q96T23 1441 aaPredicted RBP33.2■■■□□ 2.91
SEMA6C-210ENST00000621728 BAZ1AQ9NRL2 1556 aaPredicted RBP33.16■■■□□ 2.9
SEMA6C-210ENST00000621728 SMARCA4P51532 1647 aa33.11■■■□□ 2.89
SEMA6C-210ENST00000621728 WIZO95785 1651 aa32.96■■■□□ 2.87
SEMA6C-210ENST00000621728 EIF4G1Q04637 1599 aaKnown RBP32.86■■■□□ 2.85
SEMA6C-210ENST00000621728 PEG3Q9GZU2 1588 aa32.65■■■□□ 2.82
SEMA6C-210ENST00000621728 ATAD2BQ9ULI0 1458 aa32.62■■■□□ 2.81
SEMA6C-210ENST00000621728 SMARCA2P51531 1590 aa32.55■■■□□ 2.8
SEMA6C-210ENST00000621728 TOP2AP11388 1531 aaKnown RBP32.53■■■□□ 2.8
SEMA6C-210ENST00000621728 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
SEMA6C-210ENST00000621728 BAZ1BQ9UIG0 1483 aaKnown RBP32.42■■■□□ 2.78
SEMA6C-210ENST00000621728 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
SEMA6C-210ENST00000621728 HMGXB3Q12766 1538 aa32.29■■■□□ 2.76
SEMA6C-210ENST00000621728 CCDC88BA6NC98 1476 aa32.22■■■□□ 2.75
SEMA6C-210ENST00000621728 DNAJC5BQ9UF47 199 aa32.01■■■□□ 2.71
SEMA6C-210ENST00000621728 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
SEMA6C-210ENST00000621728 CFTRP13569 1480 aa31.56■■■□□ 2.64
SEMA6C-210ENST00000621728 CADPSQ9ULU8 1353 aa31.51■■■□□ 2.64
SEMA6C-210ENST00000621728 ABCC8Q09428 1581 aa31.51■■■□□ 2.63
SEMA6C-210ENST00000621728 NESP48681 1621 aa31.47■■■□□ 2.63
SEMA6C-210ENST00000621728 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
SEMA6C-210ENST00000621728 TRIM41Q8WV44 630 aa31.35■■■□□ 2.61
SEMA6C-210ENST00000621728 LAMC3Q9Y6N6 1575 aa31.32■■■□□ 2.6
SEMA6C-210ENST00000621728 WRNQ14191 1432 aaPredicted RBP eCLIP31.24■■■□□ 2.59
SEMA6C-210ENST00000621728 SYNJ1O43426 1573 aa31.21■■■□□ 2.59
SEMA6C-210ENST00000621728 FANCD2Q9BXW9 1451 aa31.2■■■□□ 2.59
SEMA6C-210ENST00000621728 CUX1P39880 1505 aa31.08■■■□□ 2.57
SEMA6C-210ENST00000621728 KIF21AQ7Z4S6 1674 aa31.08■■■□□ 2.57
SEMA6C-210ENST00000621728 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
SEMA6C-210ENST00000621728 TOP2BQ02880 1626 aa31.04■■■□□ 2.56
SEMA6C-210ENST00000621728 CEP164Q9UPV0 1460 aa31.03■■■□□ 2.56
SEMA6C-210ENST00000621728 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
SEMA6C-210ENST00000621728 FAM9AQ8IZU1 332 aaPredicted RBP30.88■■■□□ 2.53
SEMA6C-210ENST00000621728 URB2Q14146 1524 aaKnown RBP30.87■■■□□ 2.53
SEMA6C-210ENST00000621728 DNMBPQ6XZF7 1577 aa30.86■■■□□ 2.53
SEMA6C-210ENST00000621728 TOPBP1Q92547 1522 aa30.84■■■□□ 2.53
SEMA6C-210ENST00000621728 SOGA1O94964 1423 aa30.82■■■□□ 2.52
SEMA6C-210ENST00000621728 ERCC6Q03468 1493 aa30.78■■■□□ 2.52
SEMA6C-210ENST00000621728 FGD5Q6ZNL6 1462 aa30.77■■■□□ 2.52
SEMA6C-210ENST00000621728 RUSC2Q8N2Y8 1516 aa30.76■■■□□ 2.51
SEMA6C-210ENST00000621728 MRC2Q9UBG0 1479 aa30.73■■■□□ 2.51
SEMA6C-210ENST00000621728 POLA1P09884 1462 aaPredicted RBP30.66■■■□□ 2.5
SEMA6C-210ENST00000621728 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
SEMA6C-210ENST00000621728 RAD54L2Q9Y4B4 1467 aa30.61■■■□□ 2.49
SEMA6C-210ENST00000621728 LOC105371045A0A1W2PR82 267 aa30.6■■■□□ 2.49
SEMA6C-210ENST00000621728 WDR62O43379 1518 aa30.58■■■□□ 2.49
SEMA6C-210ENST00000621728 EEA1Q15075 1411 aa30.53■■■□□ 2.48
SEMA6C-210ENST00000621728 EHMT2Q96KQ7 1210 aa30.53■■■□□ 2.48
SEMA6C-210ENST00000621728 CUX2O14529 1486 aa30.51■■■□□ 2.47
SEMA6C-210ENST00000621728 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
SEMA6C-210ENST00000621728 KIF27Q86VH2 1401 aa30.45■■■□□ 2.46
SEMA6C-210ENST00000621728 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.46
SEMA6C-210ENST00000621728 WDR97A6NE52 1622 aa30.44■■■□□ 2.46
SEMA6C-210ENST00000621728 TARBP1Q13395 1621 aaKnown RBP30.42■■■□□ 2.46
SEMA6C-210ENST00000621728 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
SEMA6C-210ENST00000621728 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
SEMA6C-210ENST00000621728 ABCA5Q8WWZ7 1642 aa30.27■■■□□ 2.44
SEMA6C-210ENST00000621728 IGF1RP08069 1367 aa30.25■■■□□ 2.43
SEMA6C-210ENST00000621728 KIF21BO75037 1637 aa30.24■■■□□ 2.43
SEMA6C-210ENST00000621728 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
SEMA6C-210ENST00000621728 GAPVD1Q14C86 1478 aa30.2■■■□□ 2.43
SEMA6C-210ENST00000621728 AQRO60306 1485 aaKnown RBP eCLIP30.19■■■□□ 2.42
SEMA6C-210ENST00000621728 PRXQ9BXM0 1461 aa30.19■■■□□ 2.42
SEMA6C-210ENST00000621728 RAPGEF2Q9Y4G8 1499 aa30.19■■■□□ 2.42
SEMA6C-210ENST00000621728 GOLGA3Q08378 1498 aa30.18■■■□□ 2.42
SEMA6C-210ENST00000621728 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
SEMA6C-210ENST00000621728 EIF4G3O43432 1585 aaKnown RBP30.1■■■□□ 2.41
SEMA6C-210ENST00000621728 UBTFP17480 764 aaKnown RBP30.08■■■□□ 2.41
SEMA6C-210ENST00000621728 CARMIL1Q5VZK9 1371 aa30.08■■■□□ 2.41
SEMA6C-210ENST00000621728 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
SEMA6C-210ENST00000621728 CUL7Q14999 1698 aa30.03■■■□□ 2.4
SEMA6C-210ENST00000621728 TNIKQ9UKE5 1360 aa30■■■□□ 2.39
SEMA6C-210ENST00000621728 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
SEMA6C-210ENST00000621728 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
SEMA6C-210ENST00000621728 SNAPC4Q5SXM2 1469 aa29.89■■■□□ 2.38
SEMA6C-210ENST00000621728 CEP162Q5TB80 1403 aa29.87■■■□□ 2.37
SEMA6C-210ENST00000621728 FHAD1B1AJZ9 1412 aa29.84■■■□□ 2.37
SEMA6C-210ENST00000621728 RANGAP1P46060 587 aaPredicted RBP29.81■■■□□ 2.36
SEMA6C-210ENST00000621728 MAGI1Q96QZ7 1491 aaPredicted RBP29.76■■■□□ 2.35
SEMA6C-210ENST00000621728 CTTNBP2Q8WZ74 1663 aa29.71■■■□□ 2.35
SEMA6C-210ENST00000621728 CLIP1P30622 1438 aa29.7■■■□□ 2.35
SEMA6C-210ENST00000621728 SYNJ2O15056 1496 aa29.67■■■□□ 2.34
SEMA6C-210ENST00000621728 GRIN2AQ12879 1464 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms