Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PHB-204ENST00000434917 534 ntTSL 49.33□□□□□ -0.926e-10■■■■□ 21.1
LARP4Q71RC2 PHB-205ENST00000446735 732 ntTSL 59□□□□□ -0.976e-10■■■■□ 21.1
LARP4Q71RC2 PHB-212ENST00000512041 694 ntTSL 38.54□□□□□ -1.046e-10■■■■□ 21.1
LARP4Q71RC2 PHB-209ENST00000508009 451 ntTSL 56.88□□□□□ -1.316e-10■■■■□ 21.1
LARP4Q71RC2 CD320-203ENST00000596002 1729 ntTSL 1 (best)18.32■□□□□ 0.521e-8■■■■□ 21.1
LARP4Q71RC2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.281e-8■■■■□ 21.1
LARP4Q71RC2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.74■□□□□ 0.271e-8■■■■□ 21.1
LARP4Q71RC2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.423e-7■■■■□ 21.1
LARP4Q71RC2 PRRC2A-214ENST00000492691 1118 ntTSL 211.91□□□□□ -0.53e-7■■■■□ 21.1
LARP4Q71RC2 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.513e-7■■■■□ 21.1
LARP4Q71RC2 SOD1-203ENST00000470944 1746 ntTSL 227.43■■□□□ 1.982e-11■■■■□ 21.1
LARP4Q71RC2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.22e-11■■■■□ 21.1
LARP4Q71RC2 SOD1-202ENST00000389995 865 ntTSL 3 BASIC10.55□□□□□ -0.722e-11■■■■□ 21.1
LARP4Q71RC2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.525e-7■■■■□ 21
LARP4Q71RC2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.376e-8■■■■□ 21
LARP4Q71RC2 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.261e-6■■■■□ 21
LARP4Q71RC2 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.381e-6■■■■□ 21
LARP4Q71RC2 MRPS24-205ENST00000483330 392 ntTSL 211.02□□□□□ -0.658e-9■■■■□ 21
LARP4Q71RC2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.966e-13■■■■□ 20.9
LARP4Q71RC2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.266e-7■■■■□ 20.9
LARP4Q71RC2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.166e-7■■■■□ 20.9
LARP4Q71RC2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.966e-7■■■■□ 20.9
LARP4Q71RC2 AP2S1-205ENST00000597421 554 ntTSL 220.05■□□□□ 0.83e-6■■■■□ 20.9
LARP4Q71RC2 RER1-201ENST00000306256 695 ntTSL 518.62■□□□□ 0.571e-10■■■■□ 20.9
LARP4Q71RC2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.46■□□□□ 0.554e-8■■■■□ 20.9
LARP4Q71RC2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.29■□□□□ 0.365e-7■■■■□ 20.9
LARP4Q71RC2 RER1-206ENST00000462129 585 ntTSL 216.84■□□□□ 0.292e-10■■■■□ 20.9
LARP4Q71RC2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.51■□□□□ 0.071e-10■■■■□ 20.9
LARP4Q71RC2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.061e-10■■■■□ 20.9
LARP4Q71RC2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.37■□□□□ 0.051e-10■■■■□ 20.9
LARP4Q71RC2 G3BP1-208ENST00000520177 2700 ntTSL 1 (best)14.96□□□□□ -0.013e-7■■■■□ 20.9
LARP4Q71RC2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.142e-10■■■■□ 20.9
LARP4Q71RC2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.13□□□□□ -0.154e-8■■■■□ 20.9
LARP4Q71RC2 GNAI2-210ENST00000490122 2445 ntTSL 214.05□□□□□ -0.165e-7■■■■□ 20.9
LARP4Q71RC2 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.493e-7■■■■□ 20.9
LARP4Q71RC2 NDUFB1-203ENST00000553666 1333 ntTSL 211.81□□□□□ -0.524e-8■■■■□ 20.9
LARP4Q71RC2 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.614e-8■■■■□ 20.9
LARP4Q71RC2 NDUFB1-206ENST00000605997 336 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.934e-8■■■■□ 20.9
LARP4Q71RC2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.543e-7■■■■□ 20.9
LARP4Q71RC2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.814e-8■■■■□ 20.9
LARP4Q71RC2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.1■□□□□ 0.496e-7■■■■□ 20.9
LARP4Q71RC2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.136e-7■■■■□ 20.9
LARP4Q71RC2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.51■□□□□ 0.076e-7■■■■□ 20.9
LARP4Q71RC2 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.456e-7■■■■□ 20.9
LARP4Q71RC2 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC11.83□□□□□ -0.526e-7■■■■□ 20.9
LARP4Q71RC2 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC11.39□□□□□ -0.596e-7■■■■□ 20.9
LARP4Q71RC2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.234e-13■■■■□ 20.9
LARP4Q71RC2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.084e-13■■■■□ 20.9
LARP4Q71RC2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.154e-13■■■■□ 20.9
LARP4Q71RC2 RPL36-204ENST00000579446 452 ntTSL 2 BASIC9.85□□□□□ -0.834e-13■■■■□ 20.9
LARP4Q71RC2 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.954e-13■■■■□ 20.9
LARP4Q71RC2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.011e-17■■■■□ 20.9
LARP4Q71RC2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.03■□□□□ -01e-17■■■■□ 20.9
LARP4Q71RC2 GRN-204ENST00000586242 665 ntTSL 314.86□□□□□ -0.031e-17■■■■□ 20.9
LARP4Q71RC2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.652e-12■■■■□ 20.8
LARP4Q71RC2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.242e-12■■■■□ 20.8
LARP4Q71RC2 PRKCSH-203ENST00000586486 1613 ntTSL 1 (best)16.09■□□□□ 0.172e-12■■■■□ 20.8
LARP4Q71RC2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.112e-12■■■■□ 20.8
LARP4Q71RC2 GRN-205ENST00000586443 1557 ntTSL 318.39■□□□□ 0.531e-17■■■■□ 20.8
LARP4Q71RC2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.373e-6■■■■□ 20.8
LARP4Q71RC2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.429e-9■■■■□ 20.8
LARP4Q71RC2 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.72□□□□□ -1.494e-6■■■■□ 20.8
LARP4Q71RC2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.147e-7■■■■□ 20.8
LARP4Q71RC2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.67■□□□□ 0.17e-7■■■■□ 20.8
LARP4Q71RC2 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.417e-7■■■■□ 20.8
LARP4Q71RC2 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.447e-7■■■■□ 20.8
LARP4Q71RC2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.22□□□□□ -1.731e-323■■■■□ 20.8
LARP4Q71RC2 PRELID1-204ENST00000503853 608 ntTSL 28.74□□□□□ -1.012e-6■■■■□ 20.7
LARP4Q71RC2 ZNHIT1-202ENST00000461205 571 ntTSL 39.73□□□□□ -0.852e-11■■■■□ 20.7
LARP4Q71RC2 MESD-202ENST00000422879 1392 ntTSL 215.56■□□□□ 0.084e-8■■■■□ 20.7
LARP4Q71RC2 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.324e-8■■■■□ 20.7
LARP4Q71RC2 MESD-206ENST00000561312 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.424e-8■■■■□ 20.7
LARP4Q71RC2 MESD-207ENST00000619987 3978 ntTSL 1 (best)10.52□□□□□ -0.734e-8■■■■□ 20.7
LARP4Q71RC2 MESD-203ENST00000559537 539 ntTSL 49.55□□□□□ -0.884e-8■■■■□ 20.7
LARP4Q71RC2 SNRNP25-206ENST00000481947 1260 ntTSL 511.43□□□□□ -0.582e-7■■■■□ 20.7
LARP4Q71RC2 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.633e-7■■■■□ 20.7
LARP4Q71RC2 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC10.71□□□□□ -0.693e-7■■■■□ 20.7
LARP4Q71RC2 PIGU-203ENST00000438215 509 ntTSL 38.09□□□□□ -1.114e-15■■■■□ 20.7
LARP4Q71RC2 SNRNP25-205ENST00000466183 1130 ntTSL 27.9□□□□□ -1.142e-7■■■■□ 20.7
LARP4Q71RC2 PRC1-210ENST00000556972 728 ntTSL 57.22□□□□□ -1.253e-7■■■■□ 20.7
LARP4Q71RC2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.664e-7■■■■□ 20.7
LARP4Q71RC2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.02■■□□□ 1.126e-20■■■■□ 20.7
LARP4Q71RC2 SLC25A1-205ENST00000470922 1598 ntTSL 221.88■■□□□ 1.096e-20■■■■□ 20.7
LARP4Q71RC2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.046e-20■■■■□ 20.7
LARP4Q71RC2 DTD1-203ENST00000618693 695 ntTSL 512.51□□□□□ -0.419e-14■■■■□ 20.7
LARP4Q71RC2 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.619e-14■■■■□ 20.7
LARP4Q71RC2 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC8.62□□□□□ -1.039e-14■■■■□ 20.7
LARP4Q71RC2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.57■□□□□ 0.082e-13■■■■□ 20.7
LARP4Q71RC2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.042e-13■■■■□ 20.7
LARP4Q71RC2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.092e-13■■■■□ 20.7
LARP4Q71RC2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.31□□□□□ -0.122e-13■■■■□ 20.7
LARP4Q71RC2 IL32-208ENST00000525003 544 ntTSL 214.31□□□□□ -0.122e-13■■■■□ 20.7
LARP4Q71RC2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.122e-13■■■■□ 20.7
LARP4Q71RC2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.232e-13■■■■□ 20.7
LARP4Q71RC2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.55■□□□□ 0.242e-12■■■■□ 20.7
LARP4Q71RC2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.162e-12■■■■□ 20.7
LARP4Q71RC2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.69■□□□□ 0.12e-12■■■■□ 20.7
LARP4Q71RC2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.316e-7■■■■□ 20.7
LARP4Q71RC2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.16e-7■■■■□ 20.7
LARP4Q71RC2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.576e-7■■■■□ 20.7
Retrieved 100 of 15,922 protein–RNA pairs in 175.1 ms