RNA–Protein interactions for RNA: ENST00000394123.7

G3BP1-202, Transcript of G3BP stress granule assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene G3BP1, Length 10,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-202ENST00000394123 DCAF8L2P0C7V8 631 aa9.75□□□□□ -0.85
G3BP1-202ENST00000394123 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
G3BP1-202ENST00000394123 NISCHQ9Y2I1 1504 aa9.27□□□□□ -0.93
G3BP1-202ENST00000394123 PELP1Q8IZL8 1130 aaKnown RBP9.1□□□□□ -0.95
G3BP1-202ENST00000394123 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
G3BP1-202ENST00000394123 EHMT2Q96KQ7 1210 aa8.99□□□□□ -0.97
G3BP1-202ENST00000394123 APLP2Q06481 763 aa8.95□□□□□ -0.98
G3BP1-202ENST00000394123 FAM9AQ8IZU1 332 aaPredicted RBP8.83□□□□□ -1
G3BP1-202ENST00000394123 PCGF6Q9BYE7 350 aa8.77□□□□□ -1
G3BP1-202ENST00000394123 ZEB1P37275 1124 aaPredicted RBP8.74□□□□□ -1.01
G3BP1-202ENST00000394123 CENPBP07199 599 aaPredicted RBP8.73□□□□□ -1.01
G3BP1-202ENST00000394123 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
G3BP1-202ENST00000394123 ERICH6Q7L0X2 663 aa8.7□□□□□ -1.02
G3BP1-202ENST00000394123 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
G3BP1-202ENST00000394123 TRIM41Q8WV44 630 aa8.65□□□□□ -1.02
G3BP1-202ENST00000394123 ATP1B4Q9UN42 357 aaPredicted RBP8.6□□□□□ -1.03
G3BP1-202ENST00000394123 RANGAP1P46060 587 aaPredicted RBP8.6□□□□□ -1.03
G3BP1-202ENST00000394123 UBTFP17480 764 aaKnown RBP8.56□□□□□ -1.04
G3BP1-202ENST00000394123 NEFLP07196 543 aa8.53□□□□□ -1.04
G3BP1-202ENST00000394123 MYT1Q01538 1121 aa8.53□□□□□ -1.04
G3BP1-202ENST00000394123 TRIM26Q12899 539 aaPredicted RBP8.45□□□□□ -1.06
G3BP1-202ENST00000394123 YTHDC1Q96MU7 727 aaKnown RBP8.44□□□□□ -1.06
G3BP1-202ENST00000394123 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
G3BP1-202ENST00000394123 DAXXQ9UER7 740 aaPredicted RBP8.33□□□□□ -1.08
G3BP1-202ENST00000394123 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
G3BP1-202ENST00000394123 HRCP23327 699 aa8.31□□□□□ -1.08
G3BP1-202ENST00000394123 ITGAEP38570 1179 aa8.28□□□□□ -1.08
G3BP1-202ENST00000394123 CHIC1Q5VXU3 224 aa8.26□□□□□ -1.09
G3BP1-202ENST00000394123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.26□□□□□ -1.09
G3BP1-202ENST00000394123 HNRNPUL2Q1KMD3 747 aaKnown RBP8.26□□□□□ -1.09
G3BP1-202ENST00000394123 LOC105371045A0A1W2PR82 267 aa8.25□□□□□ -1.09
G3BP1-202ENST00000394123 POLR3GLQ9BT43 218 aa8.25□□□□□ -1.09
G3BP1-202ENST00000394123 DIEXFQ68CQ4 756 aaKnown RBP8.18□□□□□ -1.1
G3BP1-202ENST00000394123 CNGB1Q14028 1251 aaPredicted RBP8.15□□□□□ -1.1
G3BP1-202ENST00000394123 SLC4A1APQ9BWU0 796 aaKnown RBP8.13□□□□□ -1.11
G3BP1-202ENST00000394123 ZNF316A6NFI3 1004 aaPredicted RBP8.12□□□□□ -1.11
G3BP1-202ENST00000394123 RTL5Q5HYW3 569 aaPredicted RBP8.11□□□□□ -1.11
G3BP1-202ENST00000394123 CLSPNQ9HAW4 1339 aa8.11□□□□□ -1.11
G3BP1-202ENST00000394123 FAM50AQ14320 339 aaKnown RBP8.09□□□□□ -1.11
G3BP1-202ENST00000394123 TRIM52Q96A61 297 aa8.05□□□□□ -1.12
G3BP1-202ENST00000394123 NEUROD1Q13562 356 aa8.03□□□□□ -1.12
G3BP1-202ENST00000394123 ANP32CO43423 234 aa8.03□□□□□ -1.12
G3BP1-202ENST00000394123 CDK11AQ9UQ88 783 aaPredicted RBP8.01□□□□□ -1.13
G3BP1-202ENST00000394123 GTF3C3Q9Y5Q9 886 aa7.99□□□□□ -1.13
G3BP1-202ENST00000394123 ZBTB47Q9UFB7 747 aaPredicted RBP7.97□□□□□ -1.13
G3BP1-202ENST00000394123 CCDC180Q9P1Z9 1646 aa7.94□□□□□ -1.14
G3BP1-202ENST00000394123 PLPPR3Q6T4P5 718 aa7.94□□□□□ -1.14
G3BP1-202ENST00000394123 BCANQ96GW7 911 aa7.93□□□□□ -1.14
G3BP1-202ENST00000394123 ABCC9O60706 1549 aa7.92□□□□□ -1.14
G3BP1-202ENST00000394123 PABPN1Q86U42 306 aaKnown RBP eCLIP7.91□□□□□ -1.14
G3BP1-202ENST00000394123 ZNF326Q5BKZ1 582 aaKnown RBP7.91□□□□□ -1.14
G3BP1-202ENST00000394123 SLC24A1O60721 1099 aa7.9□□□□□ -1.14
G3BP1-202ENST00000394123 NEFMP07197 916 aa7.9□□□□□ -1.14
G3BP1-202ENST00000394123 CANXP27824 592 aaKnown RBP7.88□□□□□ -1.15
G3BP1-202ENST00000394123 ANP32AP39687 249 aaKnown RBP7.87□□□□□ -1.15
G3BP1-202ENST00000394123 FBLN2P98095 1184 aa7.86□□□□□ -1.15
G3BP1-202ENST00000394123 ACIN1Q9UKV3 1341 aaKnown RBP7.86□□□□□ -1.15
G3BP1-202ENST00000394123 CSRNP3Q8WYN3 585 aa7.84□□□□□ -1.15
G3BP1-202ENST00000394123 P3H3Q8IVL6 736 aa7.82□□□□□ -1.16
G3BP1-202ENST00000394123 BCL11AQ9H165 835 aa7.8□□□□□ -1.16
G3BP1-202ENST00000394123 ANP32BQ92688 251 aaKnown RBP7.78□□□□□ -1.16
G3BP1-202ENST00000394123 FKBP8Q14318 412 aa7.78□□□□□ -1.16
G3BP1-202ENST00000394123 ZNF777Q9ULD5 760 aaPredicted RBP7.78□□□□□ -1.16
G3BP1-202ENST00000394123 TONSLQ96HA7 1378 aa7.77□□□□□ -1.16
G3BP1-202ENST00000394123 NPM2Q86SE8 214 aaKnown RBP7.77□□□□□ -1.17
G3BP1-202ENST00000394123 UPF2Q9HAU5 1272 aaKnown RBP7.77□□□□□ -1.17
G3BP1-202ENST00000394123 A0A0G2JS52 829 aa7.75□□□□□ -1.17
G3BP1-202ENST00000394123 DCAF1Q9Y4B6 1507 aa7.75□□□□□ -1.17
G3BP1-202ENST00000394123 HSP90AA1P07900 732 aaKnown RBP7.75□□□□□ -1.17
G3BP1-202ENST00000394123 HNRNPUQ00839 825 aaKnown RBP eCLIP7.75□□□□□ -1.17
G3BP1-202ENST00000394123 ARID3CA6NKF2 412 aa7.74□□□□□ -1.17
G3BP1-202ENST00000394123 SCRIBQ14160 1630 aa7.73□□□□□ -1.17
G3BP1-202ENST00000394123 DDX10Q13206 875 aaKnown RBP7.72□□□□□ -1.17
G3BP1-202ENST00000394123 FAM9BQ8IZU0 186 aa7.72□□□□□ -1.17
G3BP1-202ENST00000394123 TMC1Q8TDI8 760 aa7.72□□□□□ -1.17
G3BP1-202ENST00000394123 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.72□□□□□ -1.17
G3BP1-202ENST00000394123 ESF1Q9H501 851 aaKnown RBP7.71□□□□□ -1.18
G3BP1-202ENST00000394123 STAG3Q9UJ98 1225 aa7.69□□□□□ -1.18
G3BP1-202ENST00000394123 CHGAP10645 457 aaKnown RBP7.69□□□□□ -1.18
G3BP1-202ENST00000394123 SALL2Q9Y467 1007 aaPredicted RBP7.68□□□□□ -1.18
G3BP1-202ENST00000394123 CCDC136Q96JN2 1154 aa7.68□□□□□ -1.18
G3BP1-202ENST00000394123 EIF5BO60841 1220 aaKnown RBP7.68□□□□□ -1.18
G3BP1-202ENST00000394123 SCAF1Q9H7N4 1312 aaKnown RBP7.67□□□□□ -1.18
G3BP1-202ENST00000394123 WDR43Q15061 677 aaKnown RBP eCLIP7.67□□□□□ -1.18
G3BP1-202ENST00000394123 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
G3BP1-202ENST00000394123 NPM1P06748 294 aaKnown RBP eCLIP7.65□□□□□ -1.18
G3BP1-202ENST00000394123 ZCCHC6Q5VYS8 1495 aaKnown RBP7.65□□□□□ -1.19
G3BP1-202ENST00000394123 TSPY4P0CV99 314 aa7.64□□□□□ -1.19
G3BP1-202ENST00000394123 TSPY10P0CW01 314 aa7.64□□□□□ -1.19
G3BP1-202ENST00000394123 SENP3Q9H4L4 574 aaPredicted RBP7.64□□□□□ -1.19
G3BP1-202ENST00000394123 CHIC2Q9UKJ5 165 aa7.63□□□□□ -1.19
G3BP1-202ENST00000394123 NBR1Q14596 966 aa7.62□□□□□ -1.19
G3BP1-202ENST00000394123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.62□□□□□ -1.193e-7■■□□□ 12.9
G3BP1-202ENST00000394123 MRS2Q9HD23 443 aa7.62□□□□□ -1.19
G3BP1-202ENST00000394123 MTUS2Q5JR59 1369 aa7.62□□□□□ -1.19
G3BP1-202ENST00000394123 MYO15BQ96JP2 1530 aa7.61□□□□□ -1.19
G3BP1-202ENST00000394123 EIF4G2P78344 907 aaKnown RBP eCLIP7.61□□□□□ -1.198e-7■■■■■ 33.6
G3BP1-202ENST00000394123 KDM2AQ9Y2K7 1162 aa7.61□□□□□ -1.19
G3BP1-202ENST00000394123 MIER1Q8N108 512 aa7.59□□□□□ -1.2
G3BP1-202ENST00000394123 MYH16Q9H6N6 1097 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms