RNA–Protein interactions for RNA: ENST00000617122.1

NDUFB1-207, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 1 (best) BASIC

Gene NDUFB1, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-207ENST00000617122 NISCHQ9Y2I1 1504 aa37.96■■■■□ 3.67
NDUFB1-207ENST00000617122 CCDC180Q9P1Z9 1646 aa33.93■■■■□ 3.02
NDUFB1-207ENST00000617122 ABCC9O60706 1549 aa33.63■■■□□ 2.97
NDUFB1-207ENST00000617122 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
NDUFB1-207ENST00000617122 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
NDUFB1-207ENST00000617122 NACADO15069 1562 aa31.96■■■□□ 2.71
NDUFB1-207ENST00000617122 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
NDUFB1-207ENST00000617122 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
NDUFB1-207ENST00000617122 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
NDUFB1-207ENST00000617122 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.62
NDUFB1-207ENST00000617122 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
NDUFB1-207ENST00000617122 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
NDUFB1-207ENST00000617122 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
NDUFB1-207ENST00000617122 SCRIBQ14160 1630 aa31.03■■■□□ 2.56
NDUFB1-207ENST00000617122 SHROOM4Q9ULL8 1493 aa30.68■■■□□ 2.5
NDUFB1-207ENST00000617122 EIF4G1Q04637 1599 aaKnown RBP30.37■■■□□ 2.45
NDUFB1-207ENST00000617122 CC2D2AQ9P2K1 1620 aa30.37■■■□□ 2.45
NDUFB1-207ENST00000617122 CECR2Q9BXF3 1484 aa30.22■■■□□ 2.43
NDUFB1-207ENST00000617122 SMARCA4P51532 1647 aa29.57■■■□□ 2.32
NDUFB1-207ENST00000617122 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
NDUFB1-207ENST00000617122 NCAPD3P42695 1498 aa29.46■■■□□ 2.31
NDUFB1-207ENST00000617122 ATAD2BQ9ULI0 1458 aa29.46■■■□□ 2.31
NDUFB1-207ENST00000617122 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
NDUFB1-207ENST00000617122 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
NDUFB1-207ENST00000617122 MROH2BQ7Z745 1585 aa29.28■■■□□ 2.28
NDUFB1-207ENST00000617122 BAZ1BQ9UIG0 1483 aaKnown RBP29.26■■■□□ 2.27
NDUFB1-207ENST00000617122 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
NDUFB1-207ENST00000617122 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
NDUFB1-207ENST00000617122 WIZO95785 1651 aa29.02■■■□□ 2.24
NDUFB1-207ENST00000617122 NESP48681 1621 aa28.98■■■□□ 2.23
NDUFB1-207ENST00000617122 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
NDUFB1-207ENST00000617122 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
NDUFB1-207ENST00000617122 CUX2O14529 1486 aa28.75■■■□□ 2.19
NDUFB1-207ENST00000617122 KIF21AQ7Z4S6 1674 aa28.67■■■□□ 2.18
NDUFB1-207ENST00000617122 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
NDUFB1-207ENST00000617122 CADPSQ9ULU8 1353 aa28.62■■■□□ 2.17
NDUFB1-207ENST00000617122 TOP2AP11388 1531 aaKnown RBP28.61■■■□□ 2.17
NDUFB1-207ENST00000617122 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
NDUFB1-207ENST00000617122 MRC2Q9UBG0 1479 aa28.37■■■□□ 2.13
NDUFB1-207ENST00000617122 CFTRP13569 1480 aa28.35■■■□□ 2.13
NDUFB1-207ENST00000617122 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
NDUFB1-207ENST00000617122 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
NDUFB1-207ENST00000617122 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
NDUFB1-207ENST00000617122 CCDC88BA6NC98 1476 aa28.29■■■□□ 2.12
NDUFB1-207ENST00000617122 WDR62O43379 1518 aa28.25■■■□□ 2.11
NDUFB1-207ENST00000617122 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
NDUFB1-207ENST00000617122 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
NDUFB1-207ENST00000617122 SUPT5HO00267 1087 aaKnown RBP27.97■■■□□ 2.07
NDUFB1-207ENST00000617122 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
NDUFB1-207ENST00000617122 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
NDUFB1-207ENST00000617122 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
NDUFB1-207ENST00000617122 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
NDUFB1-207ENST00000617122 ZNF608Q9ULD9 1512 aaPredicted RBP27.67■■■□□ 2.02
NDUFB1-207ENST00000617122 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
NDUFB1-207ENST00000617122 EIF4G3O43432 1585 aaKnown RBP27.56■■■□□ 2
NDUFB1-207ENST00000617122 OSCARQ8IYS5 282 aa27.56■■■□□ 2
NDUFB1-207ENST00000617122 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
NDUFB1-207ENST00000617122 RAD54L2Q9Y4B4 1467 aa27.51■■□□□ 1.99
NDUFB1-207ENST00000617122 CUX1P39880 1505 aa27.49■■□□□ 1.99
NDUFB1-207ENST00000617122 AQRO60306 1485 aaKnown RBP eCLIP27.49■■□□□ 1.99
NDUFB1-207ENST00000617122 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
NDUFB1-207ENST00000617122 SOGA1O94964 1423 aa27.48■■□□□ 1.99
NDUFB1-207ENST00000617122 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
NDUFB1-207ENST00000617122 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
NDUFB1-207ENST00000617122 CHD1O14646 1710 aa27.36■■□□□ 1.97
NDUFB1-207ENST00000617122 FBLN2P98095 1184 aa27.34■■□□□ 1.97
NDUFB1-207ENST00000617122 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
NDUFB1-207ENST00000617122 SNAPC4Q5SXM2 1469 aa27.23■■□□□ 1.95
NDUFB1-207ENST00000617122 PBRM1Q86U86 1689 aa27.18■■□□□ 1.94
NDUFB1-207ENST00000617122 WRNQ14191 1432 aaPredicted RBP eCLIP27.18■■□□□ 1.94
NDUFB1-207ENST00000617122 RIMBP3CA6NJZ7 1639 aa27.18■■□□□ 1.94
NDUFB1-207ENST00000617122 RIMBP3BA6NNM3 1639 aa27.18■■□□□ 1.94
NDUFB1-207ENST00000617122 RIMBP3Q9UFD9 1639 aa27.18■■□□□ 1.94
NDUFB1-207ENST00000617122 GRIN2BQ13224 1484 aa27.18■■□□□ 1.94
NDUFB1-207ENST00000617122 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
NDUFB1-207ENST00000617122 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
NDUFB1-207ENST00000617122 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
NDUFB1-207ENST00000617122 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
NDUFB1-207ENST00000617122 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
NDUFB1-207ENST00000617122 ABCA10Q8WWZ4 1543 aa27.13■■□□□ 1.93
NDUFB1-207ENST00000617122 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
NDUFB1-207ENST00000617122 ARHGEF11O15085 1522 aa27.1■■□□□ 1.93
NDUFB1-207ENST00000617122 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
NDUFB1-207ENST00000617122 SYNJ2O15056 1496 aa27.03■■□□□ 1.92
NDUFB1-207ENST00000617122 CYB5RLQ6IPT4 315 aa26.94■■□□□ 1.9
NDUFB1-207ENST00000617122 CLASP1Q7Z460 1538 aa26.92■■□□□ 1.9
NDUFB1-207ENST00000617122 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
NDUFB1-207ENST00000617122 ARAP1Q96P48 1450 aa26.84■■□□□ 1.89
NDUFB1-207ENST00000617122 GRIN2AQ12879 1464 aa26.83■■□□□ 1.89
NDUFB1-207ENST00000617122 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
NDUFB1-207ENST00000617122 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
NDUFB1-207ENST00000617122 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
NDUFB1-207ENST00000617122 NUP160Q12769 1436 aa26.67■■□□□ 1.86
NDUFB1-207ENST00000617122 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
NDUFB1-207ENST00000617122 ERCC6L2Q5T890 1561 aa26.59■■□□□ 1.85
NDUFB1-207ENST00000617122 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
NDUFB1-207ENST00000617122 CUL7Q14999 1698 aa26.55■■□□□ 1.84
NDUFB1-207ENST00000617122 IGF1RP08069 1367 aa26.55■■□□□ 1.84
NDUFB1-207ENST00000617122 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
NDUFB1-207ENST00000617122 RUSC2Q8N2Y8 1516 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms