RNA–Protein interactions for RNA: ENST00000356245.7

G3BP1-201, Transcript of G3BP stress granule assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene G3BP1, Length 2,803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-201ENST00000356245 NISCHQ9Y2I1 1504 aa25.41■■□□□ 1.66
G3BP1-201ENST00000356245 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
G3BP1-201ENST00000356245 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
G3BP1-201ENST00000356245 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
G3BP1-201ENST00000356245 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.98
G3BP1-201ENST00000356245 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
G3BP1-201ENST00000356245 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
G3BP1-201ENST00000356245 ABCC9O60706 1549 aa20.8■□□□□ 0.92
G3BP1-201ENST00000356245 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
G3BP1-201ENST00000356245 NACADO15069 1562 aa20.47■□□□□ 0.87
G3BP1-201ENST00000356245 SCRIBQ14160 1630 aa20.34■□□□□ 0.85
G3BP1-201ENST00000356245 RB1CC1Q8TDY2 1594 aa20.27■□□□□ 0.83
G3BP1-201ENST00000356245 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
G3BP1-201ENST00000356245 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
G3BP1-201ENST00000356245 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.77
G3BP1-201ENST00000356245 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
G3BP1-201ENST00000356245 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
G3BP1-201ENST00000356245 HRCP23327 699 aa19.75■□□□□ 0.75
G3BP1-201ENST00000356245 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
G3BP1-201ENST00000356245 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
G3BP1-201ENST00000356245 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
G3BP1-201ENST00000356245 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
G3BP1-201ENST00000356245 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
G3BP1-201ENST00000356245 WIZO95785 1651 aa19.51■□□□□ 0.71
G3BP1-201ENST00000356245 PPARGC1BQ86YN6 1023 aaKnown RBP19.49■□□□□ 0.71
G3BP1-201ENST00000356245 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
G3BP1-201ENST00000356245 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.68
G3BP1-201ENST00000356245 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
G3BP1-201ENST00000356245 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
G3BP1-201ENST00000356245 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
G3BP1-201ENST00000356245 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
G3BP1-201ENST00000356245 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
G3BP1-201ENST00000356245 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
G3BP1-201ENST00000356245 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
G3BP1-201ENST00000356245 CCDC88BA6NC98 1476 aa19.15■□□□□ 0.66
G3BP1-201ENST00000356245 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
G3BP1-201ENST00000356245 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.65
G3BP1-201ENST00000356245 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
G3BP1-201ENST00000356245 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
G3BP1-201ENST00000356245 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
G3BP1-201ENST00000356245 ZEB1P37275 1124 aaPredicted RBP18.84■□□□□ 0.61
G3BP1-201ENST00000356245 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
G3BP1-201ENST00000356245 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.6
G3BP1-201ENST00000356245 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
G3BP1-201ENST00000356245 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.58
G3BP1-201ENST00000356245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
G3BP1-201ENST00000356245 CFTRP13569 1480 aa18.59■□□□□ 0.57
G3BP1-201ENST00000356245 MYT1Q01538 1121 aa18.58■□□□□ 0.57
G3BP1-201ENST00000356245 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
G3BP1-201ENST00000356245 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
G3BP1-201ENST00000356245 SOGA1O94964 1423 aa18.52■□□□□ 0.56
G3BP1-201ENST00000356245 CADPSQ9ULU8 1353 aa18.51■□□□□ 0.55
G3BP1-201ENST00000356245 RUSC2Q8N2Y8 1516 aa18.45■□□□□ 0.54
G3BP1-201ENST00000356245 UBTFP17480 764 aaKnown RBP18.45■□□□□ 0.54
G3BP1-201ENST00000356245 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
G3BP1-201ENST00000356245 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
G3BP1-201ENST00000356245 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
G3BP1-201ENST00000356245 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
G3BP1-201ENST00000356245 EEA1Q15075 1411 aa18.41■□□□□ 0.54
G3BP1-201ENST00000356245 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
G3BP1-201ENST00000356245 CUX1P39880 1505 aa18.37■□□□□ 0.53
G3BP1-201ENST00000356245 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
G3BP1-201ENST00000356245 BIVM-ERCC5R4GMW8 1640 aa18.36■□□□□ 0.53
G3BP1-201ENST00000356245 NESP48681 1621 aa18.33■□□□□ 0.52
G3BP1-201ENST00000356245 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
G3BP1-201ENST00000356245 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
G3BP1-201ENST00000356245 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
G3BP1-201ENST00000356245 RANGAP1P46060 587 aaPredicted RBP18.22■□□□□ 0.51
G3BP1-201ENST00000356245 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
G3BP1-201ENST00000356245 GOLGA3Q08378 1498 aa18.18■□□□□ 0.5
G3BP1-201ENST00000356245 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
G3BP1-201ENST00000356245 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
G3BP1-201ENST00000356245 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
G3BP1-201ENST00000356245 FGD5Q6ZNL6 1462 aa18.15■□□□□ 0.5
G3BP1-201ENST00000356245 KIF21BO75037 1637 aa18.14■□□□□ 0.49
G3BP1-201ENST00000356245 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
G3BP1-201ENST00000356245 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
G3BP1-201ENST00000356245 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
G3BP1-201ENST00000356245 TOPBP1Q92547 1522 aa18.1■□□□□ 0.49
G3BP1-201ENST00000356245 DNMBPQ6XZF7 1577 aa18.1■□□□□ 0.49
G3BP1-201ENST00000356245 ACIN1Q9UKV3 1341 aaKnown RBP18.09■□□□□ 0.49
G3BP1-201ENST00000356245 CUX2O14529 1486 aa18.08■□□□□ 0.48
G3BP1-201ENST00000356245 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
G3BP1-201ENST00000356245 URB2Q14146 1524 aaKnown RBP18.05■□□□□ 0.48
G3BP1-201ENST00000356245 APLP2Q06481 763 aa18.04■□□□□ 0.48
G3BP1-201ENST00000356245 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
G3BP1-201ENST00000356245 CLIP1P30622 1438 aa18.03■□□□□ 0.48
G3BP1-201ENST00000356245 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
G3BP1-201ENST00000356245 IGF1RP08069 1367 aa18.03■□□□□ 0.48
G3BP1-201ENST00000356245 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.47
G3BP1-201ENST00000356245 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
G3BP1-201ENST00000356245 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
G3BP1-201ENST00000356245 CENPBP07199 599 aaPredicted RBP17.99■□□□□ 0.47
G3BP1-201ENST00000356245 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
G3BP1-201ENST00000356245 GTF3C3Q9Y5Q9 886 aa17.96■□□□□ 0.47
G3BP1-201ENST00000356245 YTHDC1Q96MU7 727 aaKnown RBP17.94■□□□□ 0.46
G3BP1-201ENST00000356245 CARMIL1Q5VZK9 1371 aa17.92■□□□□ 0.46
G3BP1-201ENST00000356245 VPS8Q8N3P4 1428 aa17.91■□□□□ 0.46
G3BP1-201ENST00000356245 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
G3BP1-201ENST00000356245 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms