RNA–Protein interactions for RNA: ENST00000368279.7

PMF1-203, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-203ENST00000368279 NISCHQ9Y2I1 1504 aa31.95■■■□□ 2.71
PMF1-203ENST00000368279 ABCC9O60706 1549 aa28.96■■■□□ 2.23
PMF1-203ENST00000368279 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
PMF1-203ENST00000368279 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
PMF1-203ENST00000368279 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.98
PMF1-203ENST00000368279 NACADO15069 1562 aa27.22■■□□□ 1.95
PMF1-203ENST00000368279 DCAF8L2P0C7V8 631 aa27.13■■□□□ 1.93
PMF1-203ENST00000368279 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
PMF1-203ENST00000368279 UNC13AQ9UPW8 1703 aa26.81■■□□□ 1.88
PMF1-203ENST00000368279 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
PMF1-203ENST00000368279 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
PMF1-203ENST00000368279 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
PMF1-203ENST00000368279 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
PMF1-203ENST00000368279 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
PMF1-203ENST00000368279 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
PMF1-203ENST00000368279 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.77
PMF1-203ENST00000368279 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
PMF1-203ENST00000368279 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
PMF1-203ENST00000368279 DNAJC5Q9H3Z4 198 aa25.3■■□□□ 1.64
PMF1-203ENST00000368279 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
PMF1-203ENST00000368279 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
PMF1-203ENST00000368279 CUX2O14529 1486 aa25.03■■□□□ 1.6
PMF1-203ENST00000368279 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
PMF1-203ENST00000368279 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
PMF1-203ENST00000368279 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
PMF1-203ENST00000368279 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
PMF1-203ENST00000368279 NESP48681 1621 aa24.83■■□□□ 1.56
PMF1-203ENST00000368279 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
PMF1-203ENST00000368279 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
PMF1-203ENST00000368279 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
PMF1-203ENST00000368279 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
PMF1-203ENST00000368279 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
PMF1-203ENST00000368279 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
PMF1-203ENST00000368279 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
PMF1-203ENST00000368279 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
PMF1-203ENST00000368279 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
PMF1-203ENST00000368279 WIZO95785 1651 aa24.3■■□□□ 1.48
PMF1-203ENST00000368279 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
PMF1-203ENST00000368279 WDR62O43379 1518 aa24.2■■□□□ 1.47
PMF1-203ENST00000368279 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
PMF1-203ENST00000368279 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
PMF1-203ENST00000368279 FANCD2Q9BXW9 1451 aa24.1■■□□□ 1.45
PMF1-203ENST00000368279 CFTRP13569 1480 aa24.07■■□□□ 1.44
PMF1-203ENST00000368279 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
PMF1-203ENST00000368279 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
PMF1-203ENST00000368279 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
PMF1-203ENST00000368279 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
PMF1-203ENST00000368279 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
PMF1-203ENST00000368279 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
PMF1-203ENST00000368279 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
PMF1-203ENST00000368279 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
PMF1-203ENST00000368279 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
PMF1-203ENST00000368279 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
PMF1-203ENST00000368279 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
PMF1-203ENST00000368279 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
PMF1-203ENST00000368279 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
PMF1-203ENST00000368279 DNMBPQ6XZF7 1577 aa23.49■■□□□ 1.35
PMF1-203ENST00000368279 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
PMF1-203ENST00000368279 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
PMF1-203ENST00000368279 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.349e-8■■■■■ 32
PMF1-203ENST00000368279 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
PMF1-203ENST00000368279 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
PMF1-203ENST00000368279 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
PMF1-203ENST00000368279 FBLN2P98095 1184 aa23.34■■□□□ 1.33
PMF1-203ENST00000368279 CHD1O14646 1710 aa23.33■■□□□ 1.33
PMF1-203ENST00000368279 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
PMF1-203ENST00000368279 SOGA1O94964 1423 aa23.28■■□□□ 1.32
PMF1-203ENST00000368279 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
PMF1-203ENST00000368279 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
PMF1-203ENST00000368279 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
PMF1-203ENST00000368279 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
PMF1-203ENST00000368279 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
PMF1-203ENST00000368279 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
PMF1-203ENST00000368279 WDR97A6NE52 1622 aa23.14■■□□□ 1.29
PMF1-203ENST00000368279 CUX1P39880 1505 aa23.13■■□□□ 1.29
PMF1-203ENST00000368279 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
PMF1-203ENST00000368279 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
PMF1-203ENST00000368279 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.28
PMF1-203ENST00000368279 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
PMF1-203ENST00000368279 SYNJ2O15056 1496 aa23.03■■□□□ 1.28
PMF1-203ENST00000368279 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
PMF1-203ENST00000368279 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
PMF1-203ENST00000368279 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
PMF1-203ENST00000368279 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
PMF1-203ENST00000368279 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
PMF1-203ENST00000368279 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.24
PMF1-203ENST00000368279 GRIN2AQ12879 1464 aa22.78■■□□□ 1.24
PMF1-203ENST00000368279 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
PMF1-203ENST00000368279 NUP160Q12769 1436 aa22.72■■□□□ 1.23
PMF1-203ENST00000368279 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
PMF1-203ENST00000368279 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
PMF1-203ENST00000368279 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
PMF1-203ENST00000368279 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
PMF1-203ENST00000368279 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
PMF1-203ENST00000368279 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
PMF1-203ENST00000368279 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
PMF1-203ENST00000368279 SHROOM2Q13796 1616 aa22.61■■□□□ 1.21
PMF1-203ENST00000368279 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
PMF1-203ENST00000368279 PRG4Q92954 1404 aaPredicted RBP22.52■■□□□ 1.2
PMF1-203ENST00000368279 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms