RNA–Protein interactions for RNA: ENST00000398576.6

LCP1-202, Transcript of lymphocyte cytosolic protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LCP1, Length 3,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-202ENST00000398576 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
LCP1-202ENST00000398576 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.12
LCP1-202ENST00000398576 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
LCP1-202ENST00000398576 NACADO15069 1562 aa13.26□□□□□ -0.29
LCP1-202ENST00000398576 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
LCP1-202ENST00000398576 ABCC9O60706 1549 aa13.22□□□□□ -0.29
LCP1-202ENST00000398576 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
LCP1-202ENST00000398576 UNC13AQ9UPW8 1703 aa13.18□□□□□ -0.3
LCP1-202ENST00000398576 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
LCP1-202ENST00000398576 ZCCHC6Q5VYS8 1495 aaKnown RBP12.95□□□□□ -0.34
LCP1-202ENST00000398576 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
LCP1-202ENST00000398576 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
LCP1-202ENST00000398576 HRCP23327 699 aa12.39□□□□□ -0.43
LCP1-202ENST00000398576 CC2D2AQ9P2K1 1620 aa12.38□□□□□ -0.43
LCP1-202ENST00000398576 SCRIBQ14160 1630 aa12.35□□□□□ -0.43
LCP1-202ENST00000398576 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
LCP1-202ENST00000398576 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
LCP1-202ENST00000398576 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
LCP1-202ENST00000398576 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
LCP1-202ENST00000398576 SMARCA4P51532 1647 aa12.12□□□□□ -0.47
LCP1-202ENST00000398576 NCAPD3P42695 1498 aa12.11□□□□□ -0.47
LCP1-202ENST00000398576 CECR2Q9BXF3 1484 aa12.09□□□□□ -0.47
LCP1-202ENST00000398576 BAZ1AQ9NRL2 1556 aaPredicted RBP12.02□□□□□ -0.48
LCP1-202ENST00000398576 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
LCP1-202ENST00000398576 CHIC1Q5VXU3 224 aa11.98□□□□□ -0.49
LCP1-202ENST00000398576 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
LCP1-202ENST00000398576 PPARGC1BQ86YN6 1023 aaKnown RBP11.98□□□□□ -0.49
LCP1-202ENST00000398576 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
LCP1-202ENST00000398576 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
LCP1-202ENST00000398576 CUX2O14529 1486 aa11.91□□□□□ -0.5
LCP1-202ENST00000398576 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
LCP1-202ENST00000398576 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
LCP1-202ENST00000398576 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
LCP1-202ENST00000398576 MROH2BQ7Z745 1585 aa11.76□□□□□ -0.53
LCP1-202ENST00000398576 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
LCP1-202ENST00000398576 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
LCP1-202ENST00000398576 WDR62O43379 1518 aa11.71□□□□□ -0.53
LCP1-202ENST00000398576 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
LCP1-202ENST00000398576 TOP2AP11388 1531 aaKnown RBP11.71□□□□□ -0.54
LCP1-202ENST00000398576 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
LCP1-202ENST00000398576 WIZO95785 1651 aa11.66□□□□□ -0.54
LCP1-202ENST00000398576 DCAF8L2P0C7V8 631 aa11.66□□□□□ -0.54
LCP1-202ENST00000398576 WDR97A6NE52 1622 aa11.63□□□□□ -0.55
LCP1-202ENST00000398576 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
LCP1-202ENST00000398576 CFTRP13569 1480 aa11.58□□□□□ -0.56
LCP1-202ENST00000398576 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.57
LCP1-202ENST00000398576 RSF1Q96T23 1441 aaPredicted RBP11.51□□□□□ -0.57
LCP1-202ENST00000398576 LOC105371045A0A1W2PR82 267 aa11.51□□□□□ -0.57
LCP1-202ENST00000398576 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
LCP1-202ENST00000398576 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
LCP1-202ENST00000398576 NESP48681 1621 aa11.48□□□□□ -0.57
LCP1-202ENST00000398576 ZEB1P37275 1124 aaPredicted RBP11.45□□□□□ -0.58
LCP1-202ENST00000398576 ABCC8Q09428 1581 aa11.4□□□□□ -0.58
LCP1-202ENST00000398576 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.58
LCP1-202ENST00000398576 ERCC6Q03468 1493 aa11.38□□□□□ -0.59
LCP1-202ENST00000398576 DNMBPQ6XZF7 1577 aa11.38□□□□□ -0.59
LCP1-202ENST00000398576 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
LCP1-202ENST00000398576 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
LCP1-202ENST00000398576 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
LCP1-202ENST00000398576 FANCD2Q9BXW9 1451 aa11.35□□□□□ -0.59
LCP1-202ENST00000398576 MYT1Q01538 1121 aa11.35□□□□□ -0.59
LCP1-202ENST00000398576 NEUROD1Q13562 356 aa11.33□□□□□ -0.6
LCP1-202ENST00000398576 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
LCP1-202ENST00000398576 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
LCP1-202ENST00000398576 BIVM-ERCC5R4GMW8 1640 aa11.29□□□□□ -0.6
LCP1-202ENST00000398576 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
LCP1-202ENST00000398576 EIF4G3O43432 1585 aaKnown RBP11.25□□□□□ -0.61
LCP1-202ENST00000398576 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
LCP1-202ENST00000398576 ABCA5Q8WWZ7 1642 aa11.22□□□□□ -0.61
LCP1-202ENST00000398576 PBRM1Q86U86 1689 aa11.22□□□□□ -0.61
LCP1-202ENST00000398576 WRNQ14191 1432 aaPredicted RBP eCLIP11.21□□□□□ -0.61
LCP1-202ENST00000398576 CHD1O14646 1710 aa11.19□□□□□ -0.62
LCP1-202ENST00000398576 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
LCP1-202ENST00000398576 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
LCP1-202ENST00000398576 SHROOM2Q13796 1616 aa11.14□□□□□ -0.63
LCP1-202ENST00000398576 TOP2BQ02880 1626 aa11.13□□□□□ -0.63
LCP1-202ENST00000398576 GTF3C3Q9Y5Q9 886 aa11.13□□□□□ -0.63
LCP1-202ENST00000398576 CUX1P39880 1505 aa11.11□□□□□ -0.63
LCP1-202ENST00000398576 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
LCP1-202ENST00000398576 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
LCP1-202ENST00000398576 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
LCP1-202ENST00000398576 POLA1P09884 1462 aaPredicted RBP11.09□□□□□ -0.63
LCP1-202ENST00000398576 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
LCP1-202ENST00000398576 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
LCP1-202ENST00000398576 ADAMTS12P58397 1594 aa11.03□□□□□ -0.64
LCP1-202ENST00000398576 ERICH3Q5RHP9 1530 aa11.02□□□□□ -0.65
LCP1-202ENST00000398576 ZNF608Q9ULD9 1512 aaPredicted RBP11□□□□□ -0.65
LCP1-202ENST00000398576 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
LCP1-202ENST00000398576 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
LCP1-202ENST00000398576 FGD5Q6ZNL6 1462 aa10.97□□□□□ -0.65
LCP1-202ENST00000398576 CUL7Q14999 1698 aa10.95□□□□□ -0.66
LCP1-202ENST00000398576 ARHGEF11O15085 1522 aa10.95□□□□□ -0.66
LCP1-202ENST00000398576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
LCP1-202ENST00000398576 SYNJ2O15056 1496 aa10.94□□□□□ -0.66
LCP1-202ENST00000398576 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
LCP1-202ENST00000398576 NUP160Q12769 1436 aa10.91□□□□□ -0.66
LCP1-202ENST00000398576 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
LCP1-202ENST00000398576 AEBP2Q6ZN18 517 aaPredicted RBP10.9□□□□□ -0.66
LCP1-202ENST00000398576 RUSC2Q8N2Y8 1516 aa10.89□□□□□ -0.67
LCP1-202ENST00000398576 CEP170Q5SW79 1584 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms