RNA–Protein interactions for RNA: ENST00000422879.3

MESD-202, Transcript of mesoderm development LRP chaperone, humanhuman

TSL 2

Gene MESD, Length 1,392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-202ENST00000422879 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
MESD-202ENST00000422879 CCDC180Q9P1Z9 1646 aa35.93■■■■□ 3.34
MESD-202ENST00000422879 ABCC9O60706 1549 aa35.11■■■■□ 3.21
MESD-202ENST00000422879 DCAF8L2P0C7V8 631 aa33.98■■■■□ 3.03
MESD-202ENST00000422879 RB1CC1Q8TDY2 1594 aa33.82■■■■□ 3.01
MESD-202ENST00000422879 NACADO15069 1562 aa33.79■■■■□ 3
MESD-202ENST00000422879 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
MESD-202ENST00000422879 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.96
MESD-202ENST00000422879 DCAF1Q9Y4B6 1507 aa33.46■■■□□ 2.95
MESD-202ENST00000422879 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
MESD-202ENST00000422879 PABPN1Q86U42 306 aaKnown RBP eCLIP32.85■■■□□ 2.852e-7■■■□□ 18
MESD-202ENST00000422879 SCRIBQ14160 1630 aa32.81■■■□□ 2.84
MESD-202ENST00000422879 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
MESD-202ENST00000422879 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
MESD-202ENST00000422879 DNAJC5BQ9UF47 199 aa32.08■■■□□ 2.73
MESD-202ENST00000422879 EIF4G1Q04637 1599 aaKnown RBP31.87■■■□□ 2.69
MESD-202ENST00000422879 CC2D2AQ9P2K1 1620 aa31.74■■■□□ 2.67
MESD-202ENST00000422879 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
MESD-202ENST00000422879 BAZ1AQ9NRL2 1556 aaPredicted RBP31.38■■■□□ 2.61
MESD-202ENST00000422879 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
MESD-202ENST00000422879 SMARCA2P51531 1590 aa31.2■■■□□ 2.58
MESD-202ENST00000422879 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
MESD-202ENST00000422879 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
MESD-202ENST00000422879 NCAPD3P42695 1498 aa31.15■■■□□ 2.58
MESD-202ENST00000422879 PEG3Q9GZU2 1588 aa31.02■■■□□ 2.56
MESD-202ENST00000422879 HMGXB3Q12766 1538 aa30.99■■■□□ 2.55
MESD-202ENST00000422879 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
MESD-202ENST00000422879 RSF1Q96T23 1441 aaPredicted RBP30.86■■■□□ 2.53
MESD-202ENST00000422879 WIZO95785 1651 aa30.85■■■□□ 2.53
MESD-202ENST00000422879 TOP2AP11388 1531 aaKnown RBP30.53■■■□□ 2.48
MESD-202ENST00000422879 NESP48681 1621 aa30.36■■■□□ 2.45
MESD-202ENST00000422879 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
MESD-202ENST00000422879 ERCC6Q03468 1493 aa30.33■■■□□ 2.45
MESD-202ENST00000422879 SUPT5HO00267 1087 aaKnown RBP30.29■■■□□ 2.44
MESD-202ENST00000422879 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
MESD-202ENST00000422879 PDS5BQ9NTI5 1447 aa30.19■■■□□ 2.42
MESD-202ENST00000422879 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
MESD-202ENST00000422879 CFTRP13569 1480 aa30.09■■■□□ 2.41
MESD-202ENST00000422879 KIF21AQ7Z4S6 1674 aa30.02■■■□□ 2.4
MESD-202ENST00000422879 FANCD2Q9BXW9 1451 aa29.94■■■□□ 2.38
MESD-202ENST00000422879 CEP164Q9UPV0 1460 aa29.91■■■□□ 2.38
MESD-202ENST00000422879 CUX2O14529 1486 aa29.91■■■□□ 2.38
MESD-202ENST00000422879 PRDM2Q13029 1718 aa29.87■■■□□ 2.37
MESD-202ENST00000422879 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
MESD-202ENST00000422879 MRC2Q9UBG0 1479 aa29.83■■■□□ 2.37
MESD-202ENST00000422879 WDR62O43379 1518 aa29.68■■■□□ 2.34
MESD-202ENST00000422879 URB2Q14146 1524 aaKnown RBP29.58■■■□□ 2.33
MESD-202ENST00000422879 ABCC8Q09428 1581 aa29.53■■■□□ 2.32
MESD-202ENST00000422879 TOPBP1Q92547 1522 aa29.44■■■□□ 2.3
MESD-202ENST00000422879 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
MESD-202ENST00000422879 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
MESD-202ENST00000422879 CUX1P39880 1505 aa29.23■■■□□ 2.27
MESD-202ENST00000422879 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
MESD-202ENST00000422879 FGD5Q6ZNL6 1462 aa29.15■■■□□ 2.26
MESD-202ENST00000422879 SOGA1O94964 1423 aa29.15■■■□□ 2.26
MESD-202ENST00000422879 WRNQ14191 1432 aaPredicted RBP eCLIP29.15■■■□□ 2.26
MESD-202ENST00000422879 RAD54L2Q9Y4B4 1467 aa29.08■■■□□ 2.25
MESD-202ENST00000422879 TARBP1Q13395 1621 aaKnown RBP29.07■■■□□ 2.24
MESD-202ENST00000422879 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
MESD-202ENST00000422879 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
MESD-202ENST00000422879 BIVM-ERCC5R4GMW8 1640 aa29.01■■■□□ 2.23
MESD-202ENST00000422879 SYNJ1O43426 1573 aa28.99■■■□□ 2.23
MESD-202ENST00000422879 EIF4G3O43432 1585 aaKnown RBP28.98■■■□□ 2.23
MESD-202ENST00000422879 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.23
MESD-202ENST00000422879 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.23
MESD-202ENST00000422879 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
MESD-202ENST00000422879 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
MESD-202ENST00000422879 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
MESD-202ENST00000422879 GAPVD1Q14C86 1478 aa28.79■■■□□ 2.2
MESD-202ENST00000422879 GRIN2BQ13224 1484 aa28.78■■■□□ 2.2
MESD-202ENST00000422879 OSCARQ8IYS5 282 aa28.77■■■□□ 2.2
MESD-202ENST00000422879 FBLN2P98095 1184 aa28.75■■■□□ 2.19
MESD-202ENST00000422879 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.19
MESD-202ENST00000422879 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
MESD-202ENST00000422879 PBRM1Q86U86 1689 aa28.69■■■□□ 2.18
MESD-202ENST00000422879 MAGI1Q96QZ7 1491 aaPredicted RBP28.68■■■□□ 2.18
MESD-202ENST00000422879 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
MESD-202ENST00000422879 TRIM41Q8WV44 630 aa28.62■■■□□ 2.17
MESD-202ENST00000422879 CHD1O14646 1710 aa28.61■■■□□ 2.17
MESD-202ENST00000422879 KIF27Q86VH2 1401 aa28.57■■■□□ 2.16
MESD-202ENST00000422879 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
MESD-202ENST00000422879 ERICH3Q5RHP9 1530 aa28.54■■■□□ 2.16
MESD-202ENST00000422879 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
MESD-202ENST00000422879 ADAMTS12P58397 1594 aa28.44■■■□□ 2.14
MESD-202ENST00000422879 IGF1RP08069 1367 aa28.37■■■□□ 2.13
MESD-202ENST00000422879 GRIN2AQ12879 1464 aa28.37■■■□□ 2.13
MESD-202ENST00000422879 CUL7Q14999 1698 aa28.31■■■□□ 2.12
MESD-202ENST00000422879 CARMIL1Q5VZK9 1371 aa28.26■■■□□ 2.11
MESD-202ENST00000422879 CLASP1Q7Z460 1538 aa28.26■■■□□ 2.11
MESD-202ENST00000422879 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
MESD-202ENST00000422879 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
MESD-202ENST00000422879 NUP160Q12769 1436 aa28.22■■■□□ 2.11
MESD-202ENST00000422879 ARHGEF11O15085 1522 aa28.2■■■□□ 2.1
MESD-202ENST00000422879 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
MESD-202ENST00000422879 RIMBP3CA6NJZ7 1639 aa28.19■■■□□ 2.1
MESD-202ENST00000422879 RIMBP3BA6NNM3 1639 aa28.19■■■□□ 2.1
MESD-202ENST00000422879 RIMBP3Q9UFD9 1639 aa28.19■■■□□ 2.1
MESD-202ENST00000422879 RAPGEF2Q9Y4G8 1499 aa28.09■■■□□ 2.09
MESD-202ENST00000422879 EEA1Q15075 1411 aa28.08■■■□□ 2.09
MESD-202ENST00000422879 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms