RNA–Protein interactions for RNA: ENST00000559537.1

MESD-203, Transcript of mesoderm development LRP chaperone, humanhuman

TSL 4

Gene MESD, Length 539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-203ENST00000559537 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
MESD-203ENST00000559537 ABCC9O60706 1549 aa24.76■■□□□ 1.55
MESD-203ENST00000559537 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
MESD-203ENST00000559537 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
MESD-203ENST00000559537 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
MESD-203ENST00000559537 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.262e-7■■■□□ 18
MESD-203ENST00000559537 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
MESD-203ENST00000559537 NACADO15069 1562 aa22.66■■□□□ 1.22
MESD-203ENST00000559537 DNAJC5Q9H3Z4 198 aa22.54■■□□□ 1.2
MESD-203ENST00000559537 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
MESD-203ENST00000559537 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
MESD-203ENST00000559537 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
MESD-203ENST00000559537 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
MESD-203ENST00000559537 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.11
MESD-203ENST00000559537 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
MESD-203ENST00000559537 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
MESD-203ENST00000559537 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
MESD-203ENST00000559537 CUX2O14529 1486 aa21.58■■□□□ 1.04
MESD-203ENST00000559537 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
MESD-203ENST00000559537 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
MESD-203ENST00000559537 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
MESD-203ENST00000559537 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
MESD-203ENST00000559537 NESP48681 1621 aa20.98■□□□□ 0.95
MESD-203ENST00000559537 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
MESD-203ENST00000559537 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
MESD-203ENST00000559537 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
MESD-203ENST00000559537 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
MESD-203ENST00000559537 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
MESD-203ENST00000559537 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
MESD-203ENST00000559537 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
MESD-203ENST00000559537 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
MESD-203ENST00000559537 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
MESD-203ENST00000559537 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
MESD-203ENST00000559537 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
MESD-203ENST00000559537 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
MESD-203ENST00000559537 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
MESD-203ENST00000559537 AEBP2Q6ZN18 517 aaPredicted RBP20.41■□□□□ 0.86
MESD-203ENST00000559537 WDR62O43379 1518 aa20.37■□□□□ 0.85
MESD-203ENST00000559537 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
MESD-203ENST00000559537 RIMBP3CA6NJZ7 1639 aa20.34■□□□□ 0.85
MESD-203ENST00000559537 RIMBP3BA6NNM3 1639 aa20.34■□□□□ 0.85
MESD-203ENST00000559537 RIMBP3Q9UFD9 1639 aa20.34■□□□□ 0.85
MESD-203ENST00000559537 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
MESD-203ENST00000559537 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
MESD-203ENST00000559537 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
MESD-203ENST00000559537 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
MESD-203ENST00000559537 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
MESD-203ENST00000559537 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
MESD-203ENST00000559537 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
MESD-203ENST00000559537 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
MESD-203ENST00000559537 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
MESD-203ENST00000559537 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
MESD-203ENST00000559537 WIZO95785 1651 aa19.87■□□□□ 0.77
MESD-203ENST00000559537 FBLN2P98095 1184 aa19.84■□□□□ 0.77
MESD-203ENST00000559537 CFTRP13569 1480 aa19.84■□□□□ 0.77
MESD-203ENST00000559537 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
MESD-203ENST00000559537 CHD1O14646 1710 aa19.78■□□□□ 0.76
MESD-203ENST00000559537 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
MESD-203ENST00000559537 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
MESD-203ENST00000559537 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
MESD-203ENST00000559537 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
MESD-203ENST00000559537 PRDM2Q13029 1718 aa19.61■□□□□ 0.73
MESD-203ENST00000559537 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
MESD-203ENST00000559537 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
MESD-203ENST00000559537 ABCC8Q09428 1581 aa19.48■□□□□ 0.71
MESD-203ENST00000559537 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
MESD-203ENST00000559537 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
MESD-203ENST00000559537 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
MESD-203ENST00000559537 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
MESD-203ENST00000559537 CLASP1Q7Z460 1538 aa19.44■□□□□ 0.7
MESD-203ENST00000559537 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
MESD-203ENST00000559537 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
MESD-203ENST00000559537 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.69
MESD-203ENST00000559537 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
MESD-203ENST00000559537 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
MESD-203ENST00000559537 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
MESD-203ENST00000559537 SOGA1O94964 1423 aa19.29■□□□□ 0.68
MESD-203ENST00000559537 MAGI1Q96QZ7 1491 aaPredicted RBP19.26■□□□□ 0.67
MESD-203ENST00000559537 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
MESD-203ENST00000559537 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
MESD-203ENST00000559537 WDR97A6NE52 1622 aa19.15■□□□□ 0.66
MESD-203ENST00000559537 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
MESD-203ENST00000559537 ERCC6L2Q5T890 1561 aa19.15■□□□□ 0.66
MESD-203ENST00000559537 KIF13AQ9H1H9 1805 aa19.14■□□□□ 0.65
MESD-203ENST00000559537 KDM4FA0A1W2PPD8 638 aa19.14■□□□□ 0.65
MESD-203ENST00000559537 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
MESD-203ENST00000559537 FAM69CQ0P6D2 419 aa19.07■□□□□ 0.64
MESD-203ENST00000559537 CEP170Q5SW79 1584 aa19.02■□□□□ 0.63
MESD-203ENST00000559537 KDM6BO15054 1643 aa19.01■□□□□ 0.63
MESD-203ENST00000559537 NPM1P06748 294 aaKnown RBP eCLIP18.97■□□□□ 0.63
MESD-203ENST00000559537 CUX1P39880 1505 aa18.95■□□□□ 0.62
MESD-203ENST00000559537 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
MESD-203ENST00000559537 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
MESD-203ENST00000559537 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
MESD-203ENST00000559537 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
MESD-203ENST00000559537 DIP2BQ9P265 1576 aa18.87■□□□□ 0.61
MESD-203ENST00000559537 ABCA5Q8WWZ7 1642 aa18.86■□□□□ 0.61
MESD-203ENST00000559537 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
MESD-203ENST00000559537 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
MESD-203ENST00000559537 NUP160Q12769 1436 aa18.85■□□□□ 0.61
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