RNA–Protein interactions for RNA: ENST00000329559.7

NDUFB1-201, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 1 (best) BASIC

Gene NDUFB1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-201ENST00000329559 NISCHQ9Y2I1 1504 aa48.48■■■■■ 5.35
NDUFB1-201ENST00000329559 CCDC180Q9P1Z9 1646 aa43■■■■■ 4.47
NDUFB1-201ENST00000329559 ABCC9O60706 1549 aa42.08■■■■■ 4.33
NDUFB1-201ENST00000329559 DCAF8L2P0C7V8 631 aa40.51■■■■■ 4.08
NDUFB1-201ENST00000329559 RB1CC1Q8TDY2 1594 aa40.46■■■■■ 4.07
NDUFB1-201ENST00000329559 NACADO15069 1562 aa40.44■■■■■ 4.06
NDUFB1-201ENST00000329559 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
NDUFB1-201ENST00000329559 MYO15BQ96JP2 1530 aa40.23■■■■■ 4.03
NDUFB1-201ENST00000329559 DCAF1Q9Y4B6 1507 aa40.1■■■■■ 4.01
NDUFB1-201ENST00000329559 UNC13AQ9UPW8 1703 aa39.54■■■■□ 3.92
NDUFB1-201ENST00000329559 PABPN1Q86U42 306 aaKnown RBP eCLIP39.38■■■■□ 3.89
NDUFB1-201ENST00000329559 BICRAQ9NZM4 1560 aa39.29■■■■□ 3.88
NDUFB1-201ENST00000329559 SCRIBQ14160 1630 aa39.29■■■■□ 3.88
NDUFB1-201ENST00000329559 SHROOM4Q9ULL8 1493 aa38.81■■■■□ 3.8
NDUFB1-201ENST00000329559 DNAJC5BQ9UF47 199 aa38.63■■■■□ 3.77
NDUFB1-201ENST00000329559 EIF4G1Q04637 1599 aaKnown RBP38.22■■■■□ 3.71
NDUFB1-201ENST00000329559 CC2D2AQ9P2K1 1620 aa38.05■■■■□ 3.68
NDUFB1-201ENST00000329559 CECR2Q9BXF3 1484 aa37.8■■■■□ 3.64
NDUFB1-201ENST00000329559 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
NDUFB1-201ENST00000329559 BAZ1AQ9NRL2 1556 aaPredicted RBP37.54■■■■□ 3.6
NDUFB1-201ENST00000329559 ATAD2BQ9ULI0 1458 aa37.39■■■■□ 3.58
NDUFB1-201ENST00000329559 MROH2BQ7Z745 1585 aa37.38■■■■□ 3.58
NDUFB1-201ENST00000329559 NCAPD3P42695 1498 aa37.35■■■■□ 3.57
NDUFB1-201ENST00000329559 SMARCA2P51531 1590 aa37.3■■■■□ 3.56
NDUFB1-201ENST00000329559 PEG3Q9GZU2 1588 aa37.21■■■■□ 3.55
NDUFB1-201ENST00000329559 HMGXB3Q12766 1538 aa37.14■■■■□ 3.54
NDUFB1-201ENST00000329559 BAZ1BQ9UIG0 1483 aaKnown RBP37.06■■■■□ 3.52
NDUFB1-201ENST00000329559 RSF1Q96T23 1441 aaPredicted RBP37■■■■□ 3.51
NDUFB1-201ENST00000329559 WIZO95785 1651 aa36.97■■■■□ 3.51
NDUFB1-201ENST00000329559 TOP2AP11388 1531 aaKnown RBP36.56■■■■□ 3.44
NDUFB1-201ENST00000329559 NESP48681 1621 aa36.45■■■■□ 3.43
NDUFB1-201ENST00000329559 LAMC3Q9Y6N6 1575 aa36.32■■■■□ 3.4
NDUFB1-201ENST00000329559 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
NDUFB1-201ENST00000329559 ERCC6Q03468 1493 aa36.22■■■■□ 3.39
NDUFB1-201ENST00000329559 CCDC88BA6NC98 1476 aa36.18■■■■□ 3.38
NDUFB1-201ENST00000329559 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
NDUFB1-201ENST00000329559 PDS5BQ9NTI5 1447 aa36.08■■■■□ 3.37
NDUFB1-201ENST00000329559 CFTRP13569 1480 aa36.07■■■■□ 3.37
NDUFB1-201ENST00000329559 KIF21AQ7Z4S6 1674 aa35.97■■■■□ 3.35
NDUFB1-201ENST00000329559 FANCD2Q9BXW9 1451 aa35.85■■■■□ 3.33
NDUFB1-201ENST00000329559 THOC2Q8NI27 1593 aaKnown RBP35.84■■■■□ 3.33
NDUFB1-201ENST00000329559 CUX2O14529 1486 aa35.81■■■■□ 3.32
NDUFB1-201ENST00000329559 CEP164Q9UPV0 1460 aa35.77■■■■□ 3.32
NDUFB1-201ENST00000329559 MRC2Q9UBG0 1479 aa35.72■■■■□ 3.31
NDUFB1-201ENST00000329559 PRDM2Q13029 1718 aa35.71■■■■□ 3.31
NDUFB1-201ENST00000329559 WDR62O43379 1518 aa35.59■■■■□ 3.29
NDUFB1-201ENST00000329559 URB2Q14146 1524 aaKnown RBP35.5■■■■□ 3.27
NDUFB1-201ENST00000329559 TOPBP1Q92547 1522 aa35.28■■■■□ 3.24
NDUFB1-201ENST00000329559 ABCC8Q09428 1581 aa35.25■■■■□ 3.23
NDUFB1-201ENST00000329559 DNMBPQ6XZF7 1577 aa35.22■■■■□ 3.23
NDUFB1-201ENST00000329559 CUX1P39880 1505 aa35.06■■■■□ 3.2
NDUFB1-201ENST00000329559 IFT140Q96RY7 1462 aa35.03■■■■□ 3.2
NDUFB1-201ENST00000329559 POLA1P09884 1462 aaPredicted RBP34.99■■■■□ 3.19
NDUFB1-201ENST00000329559 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
NDUFB1-201ENST00000329559 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
NDUFB1-201ENST00000329559 TARBP1Q13395 1621 aaKnown RBP34.89■■■■□ 3.18
NDUFB1-201ENST00000329559 RAD54L2Q9Y4B4 1467 aa34.86■■■■□ 3.17
NDUFB1-201ENST00000329559 SOGA1O94964 1423 aa34.86■■■■□ 3.17
NDUFB1-201ENST00000329559 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
NDUFB1-201ENST00000329559 SYNJ1O43426 1573 aa34.76■■■■□ 3.16
NDUFB1-201ENST00000329559 TOP2BQ02880 1626 aa34.75■■■■□ 3.15
NDUFB1-201ENST00000329559 BIVM-ERCC5R4GMW8 1640 aa34.73■■■■□ 3.15
NDUFB1-201ENST00000329559 AQRO60306 1485 aaKnown RBP eCLIP34.71■■■■□ 3.15
NDUFB1-201ENST00000329559 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
NDUFB1-201ENST00000329559 DNAJC5Q9H3Z4 198 aa34.69■■■■□ 3.14
NDUFB1-201ENST00000329559 TDRD9Q8NDG6 1382 aaKnown RBP34.68■■■■□ 3.14
NDUFB1-201ENST00000329559 WDR97A6NE52 1622 aa34.59■■■■□ 3.13
NDUFB1-201ENST00000329559 ABCA10Q8WWZ4 1543 aa34.58■■■■□ 3.13
NDUFB1-201ENST00000329559 GAPVD1Q14C86 1478 aa34.44■■■■□ 3.1
NDUFB1-201ENST00000329559 GRIN2BQ13224 1484 aa34.42■■■■□ 3.1
NDUFB1-201ENST00000329559 ABCA5Q8WWZ7 1642 aa34.41■■■■□ 3.1
NDUFB1-201ENST00000329559 OSCARQ8IYS5 282 aa34.39■■■■□ 3.1
NDUFB1-201ENST00000329559 SNAPC4Q5SXM2 1469 aa34.37■■■■□ 3.09
NDUFB1-201ENST00000329559 PBRM1Q86U86 1689 aa34.32■■■■□ 3.08
NDUFB1-201ENST00000329559 MAGI1Q96QZ7 1491 aaPredicted RBP34.3■■■■□ 3.08
NDUFB1-201ENST00000329559 FBLN2P98095 1184 aa34.27■■■■□ 3.08
NDUFB1-201ENST00000329559 CHD1O14646 1710 aa34.25■■■■□ 3.07
NDUFB1-201ENST00000329559 CHMP7Q8WUX9 453 aaPredicted RBP34.19■■■■□ 3.06
NDUFB1-201ENST00000329559 SYNJ2O15056 1496 aa34.19■■■■□ 3.06
NDUFB1-201ENST00000329559 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
NDUFB1-201ENST00000329559 KIF27Q86VH2 1401 aa34.11■■■■□ 3.05
NDUFB1-201ENST00000329559 TRIM41Q8WV44 630 aa34.1■■■■□ 3.05
NDUFB1-201ENST00000329559 ADAMTS12P58397 1594 aa34.08■■■■□ 3.05
NDUFB1-201ENST00000329559 FHAD1B1AJZ9 1412 aa34.04■■■■□ 3.04
NDUFB1-201ENST00000329559 IGF1RP08069 1367 aa34.01■■■■□ 3.04
NDUFB1-201ENST00000329559 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
NDUFB1-201ENST00000329559 CLASP1Q7Z460 1538 aa33.92■■■■□ 3.02
NDUFB1-201ENST00000329559 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
NDUFB1-201ENST00000329559 NUP160Q12769 1436 aa33.84■■■■□ 3.01
NDUFB1-201ENST00000329559 CUL7Q14999 1698 aa33.83■■■■□ 3.01
NDUFB1-201ENST00000329559 CEP170Q5SW79 1584 aa33.81■■■■□ 3
NDUFB1-201ENST00000329559 ARHGEF11O15085 1522 aa33.81■■■■□ 3
NDUFB1-201ENST00000329559 RIMBP3CA6NJZ7 1639 aa33.8■■■■□ 3
NDUFB1-201ENST00000329559 RIMBP3BA6NNM3 1639 aa33.8■■■■□ 3
NDUFB1-201ENST00000329559 RIMBP3Q9UFD9 1639 aa33.8■■■■□ 3
NDUFB1-201ENST00000329559 CARMIL1Q5VZK9 1371 aa33.78■■■■□ 3
NDUFB1-201ENST00000329559 CHIC1Q5VXU3 224 aa33.78■■■■□ 3
NDUFB1-201ENST00000329559 RAPGEF2Q9Y4G8 1499 aa33.57■■■□□ 2.97
NDUFB1-201ENST00000329559 ARAP1Q96P48 1450 aa33.56■■■□□ 2.96
NDUFB1-201ENST00000329559 SHROOM2Q13796 1616 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms