RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 NISCHQ9Y2I1 1504 aa40.28■■■■■ 4.04
PRKCSH-203ENST00000586486 CCDC180Q9P1Z9 1646 aa35.63■■■■□ 3.29
PRKCSH-203ENST00000586486 ABCC9O60706 1549 aa34.15■■■■□ 3.06
PRKCSH-203ENST00000586486 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
PRKCSH-203ENST00000586486 DCAF1Q9Y4B6 1507 aa33.42■■■□□ 2.94
PRKCSH-203ENST00000586486 MYO15BQ96JP2 1530 aa33.34■■■□□ 2.93
PRKCSH-203ENST00000586486 NACADO15069 1562 aa33.31■■■□□ 2.92
PRKCSH-203ENST00000586486 DCAF8L2P0C7V8 631 aa33.22■■■□□ 2.91
PRKCSH-203ENST00000586486 RB1CC1Q8TDY2 1594 aa33.19■■■□□ 2.9
PRKCSH-203ENST00000586486 UNC13AQ9UPW8 1703 aa32.48■■■□□ 2.79
PRKCSH-203ENST00000586486 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
PRKCSH-203ENST00000586486 BICRAQ9NZM4 1560 aa32.16■■■□□ 2.74
PRKCSH-203ENST00000586486 SHROOM4Q9ULL8 1493 aa32.06■■■□□ 2.72
PRKCSH-203ENST00000586486 PABPN1Q86U42 306 aaKnown RBP eCLIP31.94■■■□□ 2.7
PRKCSH-203ENST00000586486 CECR2Q9BXF3 1484 aa31.27■■■□□ 2.6
PRKCSH-203ENST00000586486 EIF4G1Q04637 1599 aaKnown RBP31.26■■■□□ 2.6
PRKCSH-203ENST00000586486 BAZ1AQ9NRL2 1556 aaPredicted RBP31.21■■■□□ 2.59
PRKCSH-203ENST00000586486 SMARCA4P51532 1647 aa31.15■■■□□ 2.58
PRKCSH-203ENST00000586486 MROH2BQ7Z745 1585 aa31.03■■■□□ 2.56
PRKCSH-203ENST00000586486 CC2D2AQ9P2K1 1620 aa30.97■■■□□ 2.55
PRKCSH-203ENST00000586486 RSF1Q96T23 1441 aaPredicted RBP30.89■■■□□ 2.54
PRKCSH-203ENST00000586486 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
PRKCSH-203ENST00000586486 SMARCA2P51531 1590 aa30.82■■■□□ 2.53
PRKCSH-203ENST00000586486 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
PRKCSH-203ENST00000586486 WIZO95785 1651 aa30.74■■■□□ 2.51
PRKCSH-203ENST00000586486 DNAJC5BQ9UF47 199 aa30.73■■■□□ 2.51
PRKCSH-203ENST00000586486 NCAPD3P42695 1498 aa30.7■■■□□ 2.51
PRKCSH-203ENST00000586486 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
PRKCSH-203ENST00000586486 BAZ1BQ9UIG0 1483 aaKnown RBP30.57■■■□□ 2.49
PRKCSH-203ENST00000586486 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
PRKCSH-203ENST00000586486 SUPT5HO00267 1087 aaKnown RBP30.44■■■□□ 2.46
PRKCSH-203ENST00000586486 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
PRKCSH-203ENST00000586486 LAMC3Q9Y6N6 1575 aa29.83■■■□□ 2.37
PRKCSH-203ENST00000586486 CADPSQ9ULU8 1353 aa29.8■■■□□ 2.36
PRKCSH-203ENST00000586486 CFTRP13569 1480 aa29.79■■■□□ 2.36
PRKCSH-203ENST00000586486 NESP48681 1621 aa29.73■■■□□ 2.35
PRKCSH-203ENST00000586486 PRDM2Q13029 1718 aa29.7■■■□□ 2.35
PRKCSH-203ENST00000586486 PDS5BQ9NTI5 1447 aa29.55■■■□□ 2.32
PRKCSH-203ENST00000586486 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
PRKCSH-203ENST00000586486 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
PRKCSH-203ENST00000586486 ERCC6Q03468 1493 aa29.39■■■□□ 2.3
PRKCSH-203ENST00000586486 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
PRKCSH-203ENST00000586486 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
PRKCSH-203ENST00000586486 MRC2Q9UBG0 1479 aa29.23■■■□□ 2.27
PRKCSH-203ENST00000586486 ABCC8Q09428 1581 aa29.15■■■□□ 2.26
PRKCSH-203ENST00000586486 WDR62O43379 1518 aa29.15■■■□□ 2.26
PRKCSH-203ENST00000586486 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
PRKCSH-203ENST00000586486 DNMBPQ6XZF7 1577 aa29.14■■■□□ 2.25
PRKCSH-203ENST00000586486 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
PRKCSH-203ENST00000586486 CUX1P39880 1505 aa29.09■■■□□ 2.25
PRKCSH-203ENST00000586486 TOPBP1Q92547 1522 aa29.09■■■□□ 2.25
PRKCSH-203ENST00000586486 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
PRKCSH-203ENST00000586486 SYNJ1O43426 1573 aa29.03■■■□□ 2.24
PRKCSH-203ENST00000586486 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
PRKCSH-203ENST00000586486 CUX2O14529 1486 aa28.92■■■□□ 2.22
PRKCSH-203ENST00000586486 FGD5Q6ZNL6 1462 aa28.89■■■□□ 2.21
PRKCSH-203ENST00000586486 POLA1P09884 1462 aaPredicted RBP28.88■■■□□ 2.21
PRKCSH-203ENST00000586486 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
PRKCSH-203ENST00000586486 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
PRKCSH-203ENST00000586486 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
PRKCSH-203ENST00000586486 TRIM41Q8WV44 630 aa28.76■■■□□ 2.19
PRKCSH-203ENST00000586486 SOGA1O94964 1423 aa28.73■■■□□ 2.19
PRKCSH-203ENST00000586486 WDR97A6NE52 1622 aa28.71■■■□□ 2.19
PRKCSH-203ENST00000586486 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.19
PRKCSH-203ENST00000586486 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
PRKCSH-203ENST00000586486 ZNF608Q9ULD9 1512 aaPredicted RBP28.55■■■□□ 2.16
PRKCSH-203ENST00000586486 ABCA5Q8WWZ7 1642 aa28.53■■■□□ 2.16
PRKCSH-203ENST00000586486 EIF4G3O43432 1585 aaKnown RBP28.53■■■□□ 2.16
PRKCSH-203ENST00000586486 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
PRKCSH-203ENST00000586486 KIF27Q86VH2 1401 aa28.45■■■□□ 2.15
PRKCSH-203ENST00000586486 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
PRKCSH-203ENST00000586486 AQRO60306 1485 aaKnown RBP eCLIP28.43■■■□□ 2.141e-7■■■□□ 15
PRKCSH-203ENST00000586486 PBRM1Q86U86 1689 aa28.4■■■□□ 2.14
PRKCSH-203ENST00000586486 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
PRKCSH-203ENST00000586486 ERICH3Q5RHP9 1530 aa28.35■■■□□ 2.13
PRKCSH-203ENST00000586486 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
PRKCSH-203ENST00000586486 EEA1Q15075 1411 aa28.34■■■□□ 2.13
PRKCSH-203ENST00000586486 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
PRKCSH-203ENST00000586486 IGF1RP08069 1367 aa28.24■■■□□ 2.11
PRKCSH-203ENST00000586486 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
PRKCSH-203ENST00000586486 CUL7Q14999 1698 aa28.23■■■□□ 2.11
PRKCSH-203ENST00000586486 ADAMTS12P58397 1594 aa28.2■■■□□ 2.11
PRKCSH-203ENST00000586486 FHAD1B1AJZ9 1412 aa28.14■■■□□ 2.09
PRKCSH-203ENST00000586486 CSRNP3Q8WYN3 585 aa28.12■■■□□ 2.09
PRKCSH-203ENST00000586486 SYNJ2O15056 1496 aa28.11■■■□□ 2.09
PRKCSH-203ENST00000586486 FAM9AQ8IZU1 332 aaPredicted RBP28.09■■■□□ 2.09
PRKCSH-203ENST00000586486 PRXQ9BXM0 1461 aa28.09■■■□□ 2.09
PRKCSH-203ENST00000586486 CARMIL1Q5VZK9 1371 aa28.08■■■□□ 2.09
PRKCSH-203ENST00000586486 CHD1O14646 1710 aa28.05■■■□□ 2.08
PRKCSH-203ENST00000586486 KIF21BO75037 1637 aa28.03■■■□□ 2.08
PRKCSH-203ENST00000586486 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
PRKCSH-203ENST00000586486 GRIN2AQ12879 1464 aa28■■■□□ 2.07
PRKCSH-203ENST00000586486 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
PRKCSH-203ENST00000586486 FBLN2P98095 1184 aa27.91■■■□□ 2.06
PRKCSH-203ENST00000586486 GOLGA3Q08378 1498 aa27.87■■■□□ 2.05
PRKCSH-203ENST00000586486 NUP160Q12769 1436 aa27.86■■■□□ 2.05
PRKCSH-203ENST00000586486 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
PRKCSH-203ENST00000586486 CTTNBP2Q8WZ74 1663 aa27.79■■■□□ 2.04
PRKCSH-203ENST00000586486 CLASP1Q7Z460 1538 aa27.76■■■□□ 2.03
PRKCSH-203ENST00000586486 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms